RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PDGFBP01127 241 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MT-ND6P03923 174 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SRMP19623 302 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OPCMLQ14982 345 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ITSN1Q15811 1721 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 FAM83AQ86UY5 434 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 LRRC56Q8IYG6 542 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 LKAAEAR1Q8TD35 194 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPR152Q8TDT2 470 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 NPAS1Q99742 590 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 FAIM2Q9BWQ8 316 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 GDE1Q9NZC3 331 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR52A1Q9UKL2 312 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ANKRD66B4E2M5 251 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MSI1O43347 362 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 EOMESO95936 686 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ISG15P05161 165 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 PTPN3P26045 913 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 PRDX5P30044 214 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 PTGER2P43116 358 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 PNLIPRP1P54315 467 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SERF2P84101 59 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 HNRNPA0Q13151 305 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ODF4Q2M2E3 257 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 C5orf47Q569G3 176 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SFRP4Q6FHJ7 346 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CYHR1Q6ZMK1 362 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SGPP2Q8IWX5 399 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 TRMT2AQ8IZ69 625 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 KCTD13Q8WZ19 329 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR8B4Q96RC9 309 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CDC42EP3Q9UKI2 254 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MED13Q9UHV7 2174 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ADGRB2O60241 1585 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CADP27708 2225 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM82A0PJX8 343 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ADAMTS4O75173 837 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CTDNEP1O95476 244 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CDK4P11802 303 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 TYRP1P17643 537 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 P2RX1P51575 399 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 PROX2Q3B8N5 592 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 EOGTQ5NDL2 527 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 RHBDD2Q6NTF9 364 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR2M3Q8NG83 312 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR5AK2Q8NH90 309 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC22A18Q96BI1 424 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SH3YL1Q96HL8 342 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MAP1LC3CQ9BXW4 147 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM27Q9HBJ8 222 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM9BQ9NQ34 198 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 NSG2Q9Y328 171 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 THY1P04216 161 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MC4RP32245 332 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CLCN5P51795 746 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CASP9P55211 416 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 FAM74A3Q4VXF1 159 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 DEGS2Q6QHC5 323 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 PRSS48Q7RTY5 328 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR6K3Q8NGY3 331 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR2G2Q8NGZ5 317 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 FNDC9Q8TBE3 224 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ADAMTS14Q8WXS8 1223 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 DCP1AQ9NPI6 582 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 A0A0B4J2A0 478 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MYOCOSA0A1B0GUC4 107 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC22A3O75751 556 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 GYPAP02724 150 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CTSLP07711 333 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CRISP2P16562 243 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 EXOSC7Q15024 291 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OGFOD3Q6PK18 319 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 RBM23Q86U06 439 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CPXM2Q8N436 756 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPRC5AQ8NFJ5 357 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR2T12Q8NG77 320 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CANT1Q8WVQ1 401 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 KIF12Q96FN5 646 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC25A21Q9BQT8 299 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 C1orf43Q9BWL3 253 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SEC11CQ9BY50 192 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SEMA4BQ9NPR2 832 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SPATA6Q9NWH7 488 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 TREM2Q9NZC2 230 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SHPKQ9UHJ6 478 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MEGF11A6BM72 1044 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SEMA7AO75326 666 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 DRD1P21728 446 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 HOXA10P31260 410 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 TRHRP34981 398 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 PPP1CBP62140 327 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC35B1P78383 322 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 AESQ08117 197 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 LYPLAL1Q5VWZ2 237 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MRPL54Q6P161 138 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SCGB1D4Q6XE38 83 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF730Q6ZMV8 503 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 UNC5AQ6ZN44 842 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OOSP2Q86WS3 158 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms