RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ZNF574Q6ZN55 896 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 LRRC70Q7Z2Q7 622 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 GTPBP8Q8N3Z3 284 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 KCNRGQ8N5I3 272 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 FBXO15Q8NCQ5 510 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 OR10R2Q8NGX6 335 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 ST7LQ8TDW4 575 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 SMIM4Q8WVI0 70 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 KCTD12Q96CX2 325 aaKnown RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 DDA1Q9BW61 102 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 ADGRE3Q9BY15 652 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 CHTOPQ9Y3Y2 248 aaKnown RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 UBE2QL1A1L167 161 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 C1orf226A1L170 272 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 FGF16O43320 207 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 IL5P05113 134 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 SNRNP70P08621 437 aaKnown RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 OR4E1P0C645 316 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 SNRPBP14678 240 aaKnown RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF7P17097 686 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 HOXD9P28356 352 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 TDGQ13569 410 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 RGNQ15493 299 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 TEAD2Q15562 447 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 CPSF6Q16630 551 aaKnown RBP eCLIP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 NKAPLQ5M9Q1 402 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 ELFN2Q5R3F8 820 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 PTRHD1Q6GMV3 140 aaKnown RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 PGBD2Q6P3X8 592 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 LANCL3Q6ZV70 420 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 C19orf47Q8N9M1 422 aaKnown RBP10.94□□□□□ -0.66
SHMT2-201ENST00000328923 CIPCQ9C0C6 399 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 SLC32A1Q9H598 525 aa10.94□□□□□ -0.66
SHMT2-201ENST00000328923 GNG14A0A1W2PPG7 69 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 B4E171 279 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 PYCARD-AS1I3L0S3 204 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 EFCAB14O75071 495 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 AK1P00568 194 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 EPORP19235 508 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 NDUFS1P28331 727 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 XCR1P46094 333 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 CCL23P55773 120 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 TUSC3Q13454 348 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 TOMM34Q15785 309 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 KHDC3LQ587J8 217 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 ARMC6Q6NXE6 501 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 CD300LGQ6UXG3 332 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 UNQ6126/PRO20091Q6UXV3 157 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 TRAM1L1Q8N609 369 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 SDR9C7Q8NEX9 313 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 GEMIN6Q8WXD5 167 aaKnown RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 MRPS31Q92665 395 aaKnown RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 APIPQ96GX9 242 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 IP6K3Q96PC2 410 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 ELF4Q99607 663 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 MAGEH1Q9H213 219 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 MMP26Q9NRE1 261 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 FAM86C1Q9NVL1 165 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 DOK5Q9P104 306 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 CD84Q9UIB8 345 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 SLC27A6Q9Y2P4 619 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 A0A0G2JK05 382 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 A0A1W2PPC1 479 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 ANKRD66B4E2M5 251 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 M0QZQ0 153 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 GSTZ1O43708 216 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 RGS9O75916 674 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 PCDH8O95206 1070 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 IFNA17P01571 189 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 ARG1P05089 322 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 CD79AP11912 226 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 COX7A2P14406 83 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 ADH7P40394 386 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 IL10RAQ13651 578 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 ATXN7L3Q14CW9 347 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 ZNF750Q32MQ0 723 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 LINGO2Q7L985 606 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 CAMKMTQ7Z624 323 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 THNSL2Q86YJ6 484 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 SYT12Q8IV01 421 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 MUC20Q8N307 709 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 FAM26EQ8N5C1 309 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 HJURPQ8NCD3 748 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-201ENST00000328923 NPRL2Q8WTW4 380 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 APOLD1Q96LR9 279 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 TMEM27Q9HBJ8 222 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 GRHPRQ9UBQ7 328 aa10.93□□□□□ -0.66
SHMT2-201ENST00000328923 A8MXE2 369 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 UPK3BL1B0FP48 263 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 IDSB3KWA1 339 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 C9JQL5 133 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 UPK3BL2E5RIL1 263 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 SMAD6O43541 496 aaKnown RBP10.92□□□□□ -0.66
SHMT2-201ENST00000328923 SH3BGRLO75368 114 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 ADAP00813 363 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 IGLV3-27P01718 113 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 ANXA5P08758 320 aa10.92□□□□□ -0.66
SHMT2-201ENST00000328923 SLC35G4P0C7Q5 338 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms