RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 A6NLC8 198 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 SLC43A1O75387 559 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 OR8U9P0C7N5 309 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 FXYD4P59646 89 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 KIAA0895LQ68EN5 471 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 PTOV1Q86YD1 416 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 NKAIN4Q8IVV8 208 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 SGPP2Q8IWX5 399 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 IL17RDQ8NFM7 739 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 TMEM106AQ96A25 262 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 HHIPL1Q96JK4 782 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 SNX18Q96RF0 628 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 SGPP1Q9BX95 441 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 CDCA4Q9BXL8 241 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 TMEM212A6NML5 194 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 OPN1LWP04000 364 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 IRS1P35568 1242 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 DPTQ07507 201 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 SLC22A6Q4U2R8 563 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 SLC35D2Q76EJ3 337 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 NDUFAF7Q7L592 441 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 OR14A2Q96R54 314 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 PRDM9Q9NQV7 894 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.36
SPAST-201ENST00000315285 A0A087WUU8 490 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 VSTM5A8MXK1 200 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 H3BUI4 141 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 TMPRSS11DO60235 418 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 C1QAP02745 245 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 GAAP10253 952 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 CSNK1A1P48729 337 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 Q499Y3 187 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 FAM26EQ8N5C1 309 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 ZNF611Q8N823 705 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 ZNF436Q9C0F3 470 aaPredicted RBP12.77□□□□□ -0.37
SPAST-201ENST00000315285 MKRN2Q9H000 416 aaKnown RBP12.77□□□□□ -0.37
SPAST-201ENST00000315285 FBXO8Q9NRD0 319 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 SLC6A14Q9UN76 642 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 ZAR1LA6NP61 321 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 F8W036 122 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 B4GALT3O60512 393 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 PSPHP78330 225 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 BLOC1S1P78537 153 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 SMAD2Q15796 467 aaKnown RBP12.77□□□□□ -0.37
SPAST-201ENST00000315285 SFXN2Q96NB2 322 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 VRK1Q99986 396 aaPredicted RBP12.77□□□□□ -0.37
SPAST-201ENST00000315285 PBDC1Q9BVG4 233 aa12.77□□□□□ -0.37
SPAST-201ENST00000315285 VSX1Q9NZR4 365 aaPredicted RBP12.77□□□□□ -0.37
SPAST-201ENST00000315285 LSM5Q9Y4Y9 91 aaKnown RBP12.77□□□□□ -0.37
SPAST-201ENST00000315285 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 ZNF593O00488 134 aaPredicted RBP12.76□□□□□ -0.37
SPAST-201ENST00000315285 IGFBP1P08833 259 aaPredicted RBP12.76□□□□□ -0.37
SPAST-201ENST00000315285 DPY19L4Q7Z388 723 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 OR6V1Q8N148 313 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 BPIFB2Q8N4F0 458 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 ZSCAN1Q8NBB4 408 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 C19orf43Q9BQ61 176 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 FGF22Q9HCT0 170 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 ZNF175Q9Y473 711 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 FTCDNL1E5RQL4 147 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 P2RX6O15547 441 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 SSX5O60225 188 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 GALR3O60755 368 aaPredicted RBP12.76□□□□□ -0.37
SPAST-201ENST00000315285 ETHE1O95571 254 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 ITGBL1O95965 494 aaPredicted RBP12.76□□□□□ -0.37
SPAST-201ENST00000315285 HRGP04196 525 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 SELENOVP59797 346 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 TEKQ02763 1124 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 CCDC71LQ8N9Z2 235 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 ACBD4Q8NC06 268 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 NLGN4YQ8NFZ3 816 aaPredicted RBP12.76□□□□□ -0.37
SPAST-201ENST00000315285 DYNC2LI1Q8TCX1 351 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 SLC25A46Q96AG3 418 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 KIR3DX1Q9H7L2 352 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 B3GALT1Q9Y5Z6 326 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 LAMB2P55268 1798 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 A0A1W2PR48 441 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 LINC01553A4QN01 128 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 DVL2O14641 736 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 PRR35P0CG20 571 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 ETV5P41161 510 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 SLC19A1P41440 591 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 ETV1P50549 477 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 MECP2P51608 486 aaKnown RBP12.76□□□□□ -0.37
SPAST-201ENST00000315285 AKR1C2P52895 323 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 EPHA5P54756 1037 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 SRYQ05066 204 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 RBMS2Q15434 407 aaKnown RBP12.76□□□□□ -0.37
SPAST-201ENST00000315285 DUSP5Q16690 384 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 DPY19L2P2Q6ZN68 376 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 OR14A16Q8NHC5 309 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 TRBV11-1A0A0K0K1C0 115 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 A0A1B0GV50 99 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 PRRT4C9JH25 899 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 YY2O15391 372 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 IGHG1P01857 330 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 NPR2P20594 1047 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms