RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ZNF416Q9BWM5 594 aa10.27□□□□□ -0.76
PTPN7-201ENST00000309017 PCDHGA9Q9Y5G4 932 aaKnown RBP10.27□□□□□ -0.76
PTPN7-201ENST00000309017 NPTNQ9Y639 398 aa10.27□□□□□ -0.76
PTPN7-201ENST00000309017 TP53BP1Q12888 1972 aaPredicted RBP10.27□□□□□ -0.76
PTPN7-201ENST00000309017 KNL1Q8NG31 2342 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 GXYLT2A0PJZ3 443 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 PYCARD-AS1I3L0S3 204 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 SELENOFO60613 162 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 PAK4O96013 591 aaPredicted RBP10.27□□□□□ -0.77
PTPN7-201ENST00000309017 MAS1P04201 325 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 DPTQ07507 201 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 CBFBQ13951 182 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 FGL2Q14314 439 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 MELKQ14680 651 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 RGS7BPQ6MZT1 257 aaPredicted RBP10.27□□□□□ -0.77
PTPN7-201ENST00000309017 RNF44Q7L0R7 432 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 C12orf40Q86WS4 652 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 CMIPQ8IY22 773 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 DNAAF1Q8NEP3 725 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 EXO5Q9H790 373 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 PRDM9Q9NQV7 894 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 SPHK1Q9NYA1 384 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 DEC1Q9P2X7 70 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 PCDHGA5Q9Y5G8 931 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 URB1O60287 2271 aaKnown RBP10.27□□□□□ -0.77
PTPN7-201ENST00000309017 EDDM13A0A1B0GTR0 161 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 G3V3Q6 166 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 OR2T7P0C7T2 308 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 HIST1H1CP16403 213 aaKnown RBP10.27□□□□□ -0.77
PTPN7-201ENST00000309017 GABRA3P34903 492 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 PTH2RP49190 550 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 P2RX1P51575 399 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 ERVK-21P61565 698 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 MESP2Q0VG99 397 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 ALG10BQ5I7T1 473 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 TMED4Q7Z7H5 227 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 OR2T27Q8NH04 317 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 HAVCR2Q8TDQ0 301 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 TSPAN10Q9H1Z9 355 aaPredicted RBP10.27□□□□□ -0.77
PTPN7-201ENST00000309017 SLC6A20Q9NP91 592 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 PIPOXQ9P0Z9 390 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 CA5BQ9Y2D0 317 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 ADAM18Q9Y3Q7 739 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 PLEKHM1Q9Y4G2 1056 aa10.27□□□□□ -0.77
PTPN7-201ENST00000309017 TRPM6Q9BX84 2022 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 PRRT4C9JH25 899 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 AIPO00170 330 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 SLC35G6P0C7Q6 338 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 GTF2F2P13984 249 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 ATXN7L3Q14CW9 347 aaPredicted RBP10.26□□□□□ -0.77
PTPN7-201ENST00000309017 STK11Q15831 433 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 HNRNPA1L2Q32P51 320 aaKnown RBP10.26□□□□□ -0.77
PTPN7-201ENST00000309017 LRRC37A5PQ49AS3 106 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 LHX8Q68G74 356 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 RD3Q7Z3Z2 195 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 TMEFF1Q8IYR6 380 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 SPICQ8N5J4 248 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 TEX19Q8NA77 164 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 OR2L3Q8NG85 312 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 THEM6Q8WUY1 208 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 LMAN2LQ9H0V9 348 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 SLC6A15Q9H2J7 730 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 PRSS16Q9NQE7 514 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 NPDC1Q9NQX5 325 aaPredicted RBP10.26□□□□□ -0.77
PTPN7-201ENST00000309017 NCDNQ9UBB6 729 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 CTDSPLO15194 276 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 LDB3O75112 727 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 RASGRP1O95267 797 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 NID1P14543 1247 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 ITPKBP27987 946 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 PPM1AP35813 382 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 RPL35P42766 123 aaKnown RBP10.26□□□□□ -0.77
PTPN7-201ENST00000309017 DUSP8Q13202 625 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 EXOSC7Q15024 291 aaKnown RBP10.26□□□□□ -0.77
PTPN7-201ENST00000309017 YOD1Q5VVQ6 348 aaPredicted RBP10.26□□□□□ -0.77
PTPN7-201ENST00000309017 NMNAT3Q96T66 252 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 PDCD10Q9BUL8 212 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 GPR160Q9UJ42 338 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 CES1P1Q9UKY3 287 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 SC5DO75845 299 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 ADH1CP00326 375 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 ERGP11308 486 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 GRM7Q14831 915 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 MLF2Q15773 248 aaPredicted RBP10.26□□□□□ -0.77
PTPN7-201ENST00000309017 RPE65Q16518 533 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 ARHGAP11BQ3KRB8 267 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 FAM74A1Q5RGS3 127 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 ZNF626Q68DY1 528 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 MRM1Q6IN84 353 aaKnown RBP10.26□□□□□ -0.77
PTPN7-201ENST00000309017 WFIKKN2Q8TEU8 576 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 LCN9Q8WX39 176 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 GIMAP5Q96F15 307 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 REG4Q9BYZ8 158 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 SHARPINQ9H0F6 387 aa10.26□□□□□ -0.77
PTPN7-201ENST00000309017 TCF20Q9UGU0 1960 aaKnown RBP10.26□□□□□ -0.77
PTPN7-201ENST00000309017 D6RAR5 112 aa10.25□□□□□ -0.77
PTPN7-201ENST00000309017 HIST1H2ABP04908 130 aa10.25□□□□□ -0.77
PTPN7-201ENST00000309017 EPHA4P54764 986 aa10.25□□□□□ -0.77
PTPN7-201ENST00000309017 TAS2R20P59543 309 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms