RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SPHK1Q9NYA1 384 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 NOCTQ9UK39 431 aaKnown RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 I6L893 689 aaPredicted RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 LMNTD1Q8N9Z9 388 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 UBAC2Q8NBM4 344 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 TMEM19Q96HH6 336 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 IL37Q9NZH6 218 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 OSGIN1Q9UJX0 560 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 SPTA1P02549 2419 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 E9PCH4 1651 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 KDM4EB2RXH2 506 aaPredicted RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 PMP2P02689 132 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 LGALS4P56470 323 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 HSD17B11Q8NBQ5 300 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 POLEQ07864 2286 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 METTL15A6NJ78 407 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 EIF3FO00303 357 aaPredicted RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 PLD6Q8N2A8 252 aaKnown RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 OR11L1Q8NGX0 322 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 HLA-CQ95604 372 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 MUL1Q969V5 352 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 INPP5KQ9BT40 448 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 NKX6-2Q9C056 277 aaPredicted RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ZFC3H1O60293 1989 aaKnown RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 F2P00734 622 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF805Q5CZA5 627 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 MS4A13Q5J8X5 152 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 RARRES3Q9UL19 164 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 A0A1W2PP55 124 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF33BQ06732 778 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ACTBL2Q562R1 376 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 TMEM268Q5VZI3 342 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 C6orf89Q6UWU4 347 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 MED18Q9BUE0 208 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 MAF1Q9H063 256 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 MTHFD2LQ9H903 347 aaPredicted RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 MED9Q9NWA0 146 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 WIF1Q9Y5W5 379 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 DLG5Q8TDM6 1919 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF888P0CJ79 500 aaPredicted RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ACSM1Q08AH1 577 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF239Q16600 458 aaKnown RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 KCNJ15Q99712 375 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 DLC1Q96QB1 1528 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 TRAV27A0A087WT01 109 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 RAB6CQ53S08 254 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF684Q5T5D7 378 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 PIWIL3Q7Z3Z3 882 aaKnown RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 PARP16Q8N5Y8 322 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 FUBP3Q96I24 572 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ATF6BQ99941 703 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 UGT2A1Q9Y4X1 527 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 ACTL7AQ9Y615 435 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 DBX1A6NMT0 343 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 HRH2P25021 359 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 HMGCLP35914 325 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 MMP12P39900 470 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 RFC3P40938 356 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 GPR176Q14439 515 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 HACD4Q5VWC8 232 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF317Q96PQ6 595 aaPredicted RBP12.54□□□□□ -0.4
TRIM56-201ENST00000306085 NDFIP1Q9BT67 221 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 SLC2A9Q9NRM0 540 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 MCRIP1C9JLW8 97 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 NRP1O14786 923 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 OR5H8P0DN80 308 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 IL3RAP26951 378 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 RBM14Q96PK6 669 aaKnown RBP12.54□□□□□ -0.4
TRIM56-201ENST00000306085 AHCTF1Q8WYP5 2266 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 IGLON5A6NGN9 336 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 SLC16A5O15375 505 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 SLC16A7O60669 478 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 FZD7O75084 574 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 SF3B4Q15427 424 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRIM56-201ENST00000306085 THNSL2Q86YJ6 484 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 H7BYZ3 331 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 YKT6O15498 198 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 YIF1AO95070 293 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 NPY1RP25929 384 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 MTCP1P56278 107 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 CDK5Q00535 292 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 DACT2Q5SW24 774 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF468Q5VIY5 522 aaPredicted RBP12.54□□□□□ -0.4
TRIM56-201ENST00000306085 SPP1P10451 314 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 PDZK1IP1Q13113 114 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 DRD2P14416 443 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 PCBD1P61457 104 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 MFSD12Q6NUT3 480 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 SHISA6Q6ZSJ9 500 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 MFSD6LQ8IWD5 586 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 UMAD1C9J7I0 102 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 NME2P1O60361 137 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 NOGQ13253 232 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 RPE65Q16518 533 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 ADAM5Q6NVV9 412 aa12.54□□□□□ -0.4
TRIM56-201ENST00000306085 CD300LGQ6UXG3 332 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms