RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 P2RX6O15547 441 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 ZGLP1P0C6A0 271 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 TBC1D3HP0C7X1 549 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 RAD52P43351 418 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 TMEM31Q5JXX7 168 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 TBC1D3GQ6DHY5 549 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 TBC1D3CQ6IPX1 549 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 SLC25A25Q6KCM7 469 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 MFSD12Q6NUT3 480 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 ARL9Q6T311 187 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 TMUB2Q71RG4 321 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 NRROSQ86YC3 692 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 TBC1D3Q8IZP1 549 aaPredicted RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 TMEM99Q8N816 258 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 OR4D9Q8NGE8 314 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 HAVCR2Q8TDQ0 301 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 OSTF1Q92882 214 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 SLC17A9Q9BYT1 436 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 ARL6Q9H0F7 186 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 RSPH9Q9H1X1 276 aaPredicted RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 ZNF275Q9NSD4 429 aaPredicted RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 BABAM2Q9NXR7 383 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 SLC39A1Q9NY26 324 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 H2AFY2Q9P0M6 372 aaPredicted RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 PURGQ9UJV8 347 aaKnown RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 SYT5O00445 386 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 PEX12O00623 359 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 ADAM11O75078 769 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 LDB3O75112 727 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 PSMB1P20618 241 aaKnown RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 FPR3P25089 353 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 CMPK1P30085 196 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 PSMA6P60900 246 aaKnown RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 RAP2BP61225 183 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 SEC61A1P61619 476 aaKnown RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 POLR2GP62487 172 aaKnown RBP eCLIP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 FGL1Q08830 312 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 TMEM255AQ5JRV8 349 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 PRSS41Q7RTY9 318 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 CEACAM19Q7Z692 300 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 MCATQ8IVS2 390 aaKnown RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 IZUMO1Q8IYV9 350 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 SPICQ8N5J4 248 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 MEIOBQ8N635 442 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 MFSD9Q8NBP5 474 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 OR10G6Q8NH81 332 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 PHF7Q9BWX1 381 aaPredicted RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 TMPRSS13Q9BYE2 586 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 UBQLN3Q9H347 655 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 ESRP2Q9H6T0 727 aaKnown RBP14.35□□□□□ -0.11
UBAP1-201ENST00000297661 ZNF69Q9UC07 566 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 MLXQ9UH92 298 aa14.35□□□□□ -0.11
UBAP1-201ENST00000297661 A0A1B0GUH1 482 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 ARPC1BO15143 372 aaKnown RBP14.34□□□□□ -0.11
UBAP1-201ENST00000297661 SNRPBP14678 240 aaKnown RBP14.34□□□□□ -0.11
UBAP1-201ENST00000297661 PPP2CBP62714 309 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 PPP2CAP67775 309 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 GK2Q14410 553 aaPredicted RBP14.34□□□□□ -0.11
UBAP1-201ENST00000297661 CDC73Q6P1J9 531 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 FIGNL1Q6PIW4 674 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 ZC3H14Q6PJT7 736 aaKnown RBP14.34□□□□□ -0.11
UBAP1-201ENST00000297661 MBOAT2Q6ZWT7 520 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 RTL10Q7L3V2 364 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 CXXC5Q7LFL8 322 aaKnown RBP14.34□□□□□ -0.11
UBAP1-201ENST00000297661 OR2T33Q8NG76 320 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 C10orf90Q96M02 699 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 IFT27Q9BW83 186 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 COA4Q9NYJ1 87 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 CLUP10909 449 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 PPP3CBP16298 524 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 NDUFV2P19404 249 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 MAKP20794 623 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 DECR1Q16698 335 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 ZNF425Q6IV72 752 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 NHLRC1Q6VVB1 395 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 TPRA1Q86W33 373 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 NAXDQ8IW45 347 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 FAM71CQ8NEG0 241 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 TSACCQ96A04 125 aaPredicted RBP14.34□□□□□ -0.11
UBAP1-201ENST00000297661 TIMM29Q9BSF4 260 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 OR51V1Q9H2C8 321 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 FBXL4Q9UKA2 621 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 RCE1Q9Y256 329 aa14.34□□□□□ -0.11
UBAP1-201ENST00000297661 MRPS2Q9Y399 296 aaKnown RBP14.34□□□□□ -0.11
UBAP1-201ENST00000297661 LRRC72A6NJI9 287 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 E9PI62 339 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 RNGTTO60942 597 aaKnown RBP14.33□□□□□ -0.12
UBAP1-201ENST00000297661 HTR2AP28223 471 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 HTR1FP30939 366 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 PRKAR1BP31321 381 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 CCR9P51686 369 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 FXYD6P3P58550 94 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 BDH1Q02338 343 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 RUNX2Q13950 521 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 MELKQ14680 651 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 GSG1LQ6UXU4 331 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 LRRC25Q8N386 305 aaPredicted RBP14.33□□□□□ -0.12
UBAP1-201ENST00000297661 CYB561A3Q8NBI2 242 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 OR10H4Q8NGA5 316 aa14.33□□□□□ -0.12
UBAP1-201ENST00000297661 ORAI3Q9BRQ5 295 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms