RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MICU1Q9BPX6 476 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 DUSP23Q9BVJ7 150 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC38A1Q9H2H9 487 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TMEM100Q9NV29 134 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 FZD7O75084 574 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 RNF144AP50876 292 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TRA2BP62995 288 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 CAMK2DQ13557 499 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 OXA1LQ15070 435 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 HENMT1Q5T8I9 393 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 CMTM1Q8IZ96 169 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF619Q8N2I2 560 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 TOMM40LQ969M1 308 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 BPIFA2Q96DR5 249 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 NAA11Q9BSU3 229 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLAMF8Q9P0V8 285 aa11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 RPH3AQ9Y2J0 694 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-201ENST00000293748 CDC123O75794 336 aaPredicted RBP11□□□□□ -0.65
SYNGAP1-201ENST00000293748 UBL3O95164 117 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 PTHP01270 115 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 SNRNP70P08621 437 aaKnown RBP11□□□□□ -0.65
SYNGAP1-201ENST00000293748 ETV1P50549 477 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 DAPP51397 102 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 TSPAN31Q12999 210 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 GLB1L2Q8IW92 636 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 CELF2-AS1Q8N7Q2 184 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC7A6Q92536 515 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 TUBG2Q9NRH3 451 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 C5AR2Q9P296 337 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 TMPRSS11EQ9UL52 423 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 HHLA2Q9UM44 414 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 GGT3PA6NGU5 568 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 HEXBP07686 556 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 JUNDP17535 347 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 CR2P20023 1033 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC2A5P22732 501 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 HMGN3Q15651 99 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 RPL22L1Q6P5R6 122 aaKnown RBP11□□□□□ -0.65
SYNGAP1-201ENST00000293748 ALKAL2Q6UX46 152 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 RHBDD1Q8TEB9 315 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 PDE7BQ9NP56 450 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11□□□□□ -0.65
SYNGAP1-201ENST00000293748 CPED1A4D0V7 1026 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 FAM221BA6H8Z2 402 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 A6NIZ1 184 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 ALX3O95076 343 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 SERPINA5P05154 406 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 RAB6AP20340 208 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 DRD3P35462 400 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 RAB4BP61018 213 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 RAP1BP61224 184 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 RAP1AP62834 184 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 NIPAL3Q6P499 406 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF679Q8IYX0 411 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 PNPLA1Q8N8W4 532 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 STEAP2Q8NFT2 490 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 ARRDC2Q8TBH0 407 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 LMX1AQ8TE12 382 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 INTS14Q96SY0 518 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 CENPOQ9BU64 300 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 FTSJ1Q9UET6 329 aa11□□□□□ -0.65
SYNGAP1-201ENST00000293748 APOBEC3BQ9UH17 382 aaKnown RBP11□□□□□ -0.65
SYNGAP1-201ENST00000293748 ANKRD34BA5PLL1 514 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 A6NIN4 97 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR2T1O43869 369 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 PTBP1P26599 531 aaKnown RBP eCLIP10.99□□□□□ -0.652e-8■■■■□ 23.3
SYNGAP1-201ENST00000293748 MC3RP41968 323 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC6A8P48029 635 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 ADARB1P78563 741 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 MALLQ13021 153 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR2G6Q5TZ20 316 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 TMEM164Q5U3C3 297 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF695Q8IW36 515 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC35F3Q8IY50 421 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 CADM3Q8N126 398 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 ACVR1CQ8NER5 493 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 LIN37Q96GY3 246 aaPredicted RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 EGLN2Q96KS0 407 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 APOOQ9BUR5 198 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 DEFB126Q9BYW3 111 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 GFOD1Q9NXC2 390 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OSGIN1Q9UJX0 560 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 POLHQ9Y253 713 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 PEX12O00623 359 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 CRTAPO75718 401 aaPredicted RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 HLA-AP01891 365 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 APEX1P27695 318 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 MTNR1BP49286 362 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 VEGFCP49767 419 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 GLO1Q04760 184 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 ARHGAP19Q14CB8 494 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 TCTE1Q5JU00 501 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 UBE2NLQ5JXB2 153 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 RTL6Q6ICC9 239 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF322Q6U7Q0 402 aaPredicted RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF534Q76KX8 674 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 BOLLQ8N9W6 283 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR51T1Q8NGJ9 327 aa10.99□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR2T11Q8NH01 316 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms