RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 SMYD1Q8NB12 490 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 ABHD3Q8WU67 409 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 SLC35B4Q969S0 331 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 ARL5BQ96KC2 179 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 ACTR6Q9GZN1 396 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 CXorf56Q9H5V9 222 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 PLSCR4Q9NRQ2 329 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 GLRX2Q9NS18 164 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 PRDM4Q9UKN5 801 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 DNHD1Q96M86 4753 aa13.53□□□□□ -0.24
PDE6D-201ENST00000287600 FN1P02751 2386 aaKnown RBP13.53□□□□□ -0.24
PDE6D-201ENST00000287600 TMEM72A0PK05 275 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 ZNF208O43345 1280 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 PRKD3O94806 890 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 CNOT4O95628 575 aaKnown RBP13.52□□□□□ -0.25
PDE6D-201ENST00000287600 MAP2K6P52564 334 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 CSNK2A1P68400 391 aaPredicted RBP13.52□□□□□ -0.25
PDE6D-201ENST00000287600 PPP2R2BQ00005 443 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 INTS11Q5TA45 600 aaKnown RBP13.52□□□□□ -0.25
PDE6D-201ENST00000287600 ALKBH2Q6NS38 261 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 BEND4Q6ZU67 534 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 PIGWQ7Z7B1 504 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 PATL1Q86TB9 770 aaKnown RBP13.52□□□□□ -0.25
PDE6D-201ENST00000287600 CALHM3Q86XJ0 350 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 BHLHE22Q8NFJ8 381 aaPredicted RBP13.52□□□□□ -0.25
PDE6D-201ENST00000287600 RNF128Q8TEB7 428 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 DDIT4LQ96D03 193 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 PLPPR2Q96GM1 343 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 C12orf49Q9H741 205 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 EFCAB1Q9HAE3 211 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 HDGFL3Q9Y3E1 203 aa13.52□□□□□ -0.25
PDE6D-201ENST00000287600 CCT8L1PA6NM43 557 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 SMAD9O15198 467 aaKnown RBP13.51□□□□□ -0.25
PDE6D-201ENST00000287600 KLF4O43474 513 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 FESP07332 822 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 AGTR1P30556 359 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 RGS8P57771 180 aaPredicted RBP13.51□□□□□ -0.25
PDE6D-201ENST00000287600 OR2B6P58173 313 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 RNPS1Q15287 305 aaKnown RBP13.51□□□□□ -0.25
PDE6D-201ENST00000287600 SLC43A2Q8N370 569 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 OR52E4Q8NGH9 312 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 SLC26A7Q8TE54 656 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 C3orf49Q96BT1 292 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 CMTM5Q96DZ9 223 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 ZNF583Q96ND8 569 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 PRR14Q9BWN1 585 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 TMEM181Q9P2C4 612 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 RPS6KB2Q9UBS0 482 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 USP22Q9UPT9 525 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 ARL2BPQ9Y2Y0 163 aa13.51□□□□□ -0.25
PDE6D-201ENST00000287600 ZC3H12DA2A288 527 aaKnown RBP13.5□□□□□ -0.25
PDE6D-201ENST00000287600 INAFM1C9JVW0 142 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 HS3ST1O14792 307 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 PMS2P2O95744 297 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 PLAUP00749 431 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 NUDT2P50583 147 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 NCALDP61601 193 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 BNIP2Q12982 314 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 DUSP7Q16829 419 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 TMEM201Q5SNT2 666 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 ERICH5Q6P6B1 374 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 ARPINQ7Z6K5 226 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 PRIMA1Q86XR5 153 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 TUSC5Q8IXB3 177 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 TAMM41Q96BW9 452 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 ZHX1-C8orf76Q96EF9 292 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 HOPXQ9BPY8 73 aaPredicted RBP13.5□□□□□ -0.25
PDE6D-201ENST00000287600 WFDC6Q9BQY6 131 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 TACO1Q9BSH4 297 aaKnown RBP13.5□□□□□ -0.25
PDE6D-201ENST00000287600 TRIM2Q9C040 744 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 CMTM6Q9NX76 183 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 KLHL13Q9P2N7 655 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 TRAPPC4Q9Y296 219 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 GPR52Q9Y2T5 361 aa13.5□□□□□ -0.25
PDE6D-201ENST00000287600 A8MVM7 634 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 LGI1O95970 557 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 YES1P07947 543 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 IMPDH2P12268 514 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 PSMB1P20618 241 aaKnown RBP13.49□□□□□ -0.25
PDE6D-201ENST00000287600 HTR2AP28223 471 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 PRDX6P30041 224 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 IDUAP35475 653 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 ATP5J2P56134 94 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 SLC35A1P78382 337 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 RASGEF1BQ0VAM2 473 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 VEZF1Q14119 521 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 CCDC80Q76M96 950 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 ATG4DQ86TL0 474 aaPredicted RBP13.49□□□□□ -0.25
PDE6D-201ENST00000287600 SLC15A3Q8IY34 581 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 ZNF611Q8N823 705 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 LSMEM1Q8N8F7 131 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 OR2T12Q8NG77 320 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 GPR32P1Q8NGA4 272 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 IGFBPL1Q8WX77 278 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 AKAP1Q92667 903 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDE6D-201ENST00000287600 LRRC37BQ96QE4 947 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 CCT8L2Q96SF2 557 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 POTEKPQ9BYX7 375 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 OR10A4Q9H209 315 aa13.49□□□□□ -0.25
PDE6D-201ENST00000287600 TMEM27Q9HBJ8 222 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms