RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ALKBH2Q6NS38 261 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 ELOA3Q8NG57 546 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 GPR32P1Q8NGA4 272 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 TAPBPLQ9BX59 468 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 TRIM2Q9C040 744 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 CXXC4Q9H2H0 198 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 C12orf10Q9HB07 376 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 ARMCX1Q9P291 453 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 TESQ9UGI8 421 aaKnown RBP20.28■□□□□ 0.84
LSM4-201ENST00000252816 SLC13A4Q9UKG4 626 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 CAPN7Q9Y6W3 813 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 ITPR3Q14573 2671 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 BBIP1A8MTZ0 92 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 FTCDNL1E5RQL4 147 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 MRPL33O75394 65 aaKnown RBP20.27■□□□□ 0.84
LSM4-201ENST00000252816 ALG10BQ5I7T1 473 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 CASP12Q6UXS9 341 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 CALHM3Q86XJ0 350 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 UBE2J2Q8N2K1 259 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 ZIC4Q8N9L1 334 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 OR9K2Q8NGE7 335 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 OR8J3Q8NGG0 315 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 DNAJA4Q8WW22 397 aaPredicted RBP20.27■□□□□ 0.84
LSM4-201ENST00000252816 MBD6Q96DN6 1003 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 KTI12Q96EK9 354 aaPredicted RBP20.27■□□□□ 0.84
LSM4-201ENST00000252816 PLPPR2Q96GM1 343 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 ARHGDIGQ99819 225 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 SLC9A8Q9Y2E8 581 aa20.27■□□□□ 0.84
LSM4-201ENST00000252816 IGKV1D-42A0A075B6H8 117 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 M0R3H8 397 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 AHSA1O95433 338 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 LGI1O95970 557 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 NPPAP01160 153 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 CD53P19397 219 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 RPS5P46782 204 aaKnown RBP20.26■□□□□ 0.83
LSM4-201ENST00000252816 CRYBA2P53672 197 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 FOXG1P55316 489 aaPredicted RBP20.26■□□□□ 0.83
LSM4-201ENST00000252816 NCALDP61601 193 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 OR1Q1Q15612 314 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 VMACQ2NL98 169 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 SEZ6L2Q6UXD5 910 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 P3H2Q8IVL5 708 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 SLC30A8Q8IWU4 369 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 ZNF433Q8N7K0 673 aaPredicted RBP20.26■□□□□ 0.83
LSM4-201ENST00000252816 MFSD8Q8NHS3 518 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 HSD17B8Q92506 261 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 TAMM41Q96BW9 452 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 ZNF385AQ96PM9 386 aaKnown RBP20.26■□□□□ 0.83
LSM4-201ENST00000252816 SF3B5Q9BWJ5 86 aaKnown RBP20.26■□□□□ 0.83
LSM4-201ENST00000252816 USP22Q9UPT9 525 aa20.26■□□□□ 0.83
LSM4-201ENST00000252816 A0A0B4J2E0 115 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 A0A1B0GX12 115 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 PLAUP00749 431 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 PNMTP11086 282 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 CD247P20963 164 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 NRF1Q16656 503 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 FAM91A1Q658Y4 838 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 ULK3Q6PHR2 472 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 PATL1Q86TB9 770 aaKnown RBP20.25■□□□□ 0.83
LSM4-201ENST00000252816 GPAT4Q86UL3 456 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 POU5F2Q8N7G0 328 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 SLC38A4Q969I6 547 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 TMEM45BQ96B21 275 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 SLC25A36Q96CQ1 311 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 SH3GL1Q99961 368 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 UBTD1Q9HAC8 227 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 TMEM27Q9HBJ8 222 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 MALT1Q9UDY8 824 aa20.25■□□□□ 0.83
LSM4-201ENST00000252816 SLC22A2O15244 555 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 FZD7O75084 574 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 FAPQ12884 760 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 NPTX1Q15818 432 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 STK11Q15831 433 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 DEFB113Q30KQ7 82 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 TMEM225Q6GV28 225 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 OR4D11Q8NGI4 311 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 OR6T1Q8NGN1 323 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 TAAR8Q969N4 342 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 ZNF583Q96ND8 569 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 ALPK1Q96QP1 1244 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 USB1Q9BQ65 265 aaKnown RBP20.24■□□□□ 0.83
LSM4-201ENST00000252816 ECSITQ9BQ95 431 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 EVA1AQ9H8M9 152 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 PARPBPQ9NWS1 579 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 ASB6Q9NWX5 421 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 SEC14L4Q9UDX3 406 aa20.24■□□□□ 0.83
LSM4-201ENST00000252816 A0A087WUJ7 227 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 PDLIM1O00151 329 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 C8BP07358 591 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 ITGA5P08648 1049 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 GGT1P19440 569 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 SEC24CP53992 1094 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 NR1H2P55055 460 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 CDH12P55289 794 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 ACKR1Q16570 336 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 INTS11Q5TA45 600 aaKnown RBP20.23■□□□□ 0.83
LSM4-201ENST00000252816 TSPO2Q5TGU0 170 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 ZNF704Q6ZNC4 412 aaPredicted RBP20.23■□□□□ 0.83
LSM4-201ENST00000252816 CCDC80Q76M96 950 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 RANBP3LQ86VV4 465 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms