RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 NOX3Q9HBY0 568 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 MARCH4Q9P2E8 410 aaPredicted RBP12.35□□□□□ -0.43
NEK9-201ENST00000238616 PCDHA9Q9Y5H5 950 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 F2P00734 622 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 LAMP1P11279 417 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 APOOLQ6UXV4 268 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 OR5M1Q8NGP8 315 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 FAM213BQ8TBF2 198 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 TECTBQ96PL2 329 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 TAAR2Q9P1P5 351 aa12.35□□□□□ -0.43
NEK9-201ENST00000238616 EPOP01588 193 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 PIGRP01833 764 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 GM2AP17900 193 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 MICAQ29983 383 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ESPNLQ6ZVH7 1005 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 CCDC71Q8IV32 467 aaPredicted RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 NETO1Q8TDF5 533 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 TMEM239Q8WW34 195 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 FOXRED1Q96CU9 486 aaPredicted RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 CCDC106Q9BWC9 280 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ST6GALNAC4Q9H4F1 302 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 MED20Q9H944 212 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 SNAI1O95863 264 aaPredicted RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 AHRP35869 848 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 FAM26DQ5JW98 314 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 OR1E3Q8WZA6 343 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 SCML1Q9UN30 329 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 SPTBN2O15020 2390 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 TMEM269A0A1B0GVZ9 245 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 M6PRP20645 277 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 GIFP27352 417 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 CXADRP78310 365 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 TBC1D28Q2M2D7 210 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 SLC35D2Q76EJ3 337 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ACOT4Q8N9L9 421 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 OR2T35Q8NGX2 323 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 EPHX3Q9H6B9 360 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 Q9Y3F1 56 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 MED12Q93074 2177 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 FOXE1O00358 373 aaPredicted RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 DDAH2O95865 285 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 TCN2P20062 427 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 EMG1Q92979 244 aaKnown RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 SLC39A9Q9NUM3 307 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 TXNL4BQ9NX01 149 aaKnown RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 KIF25Q9UIL4 384 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ZNF443Q9Y2A4 671 aaPredicted RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 ATP23Q9Y6H3 246 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 H0YAE9 185 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ADAM23O75077 832 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 EBPQ15125 230 aaKnown RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 NPSR1Q6W5P4 371 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 OBP2AQ9NY56 170 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 CACNG2Q9Y698 323 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 MEGF11A6BM72 1044 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ABHD16AO95870 558 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 CD63P08962 238 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 TAS2R46P59540 309 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 UBE2KP61086 200 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 PMPCAQ10713 525 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ZNF546Q86UE3 836 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 UTP4Q969X6 686 aaKnown RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 PITHD1Q9GZP4 211 aaPredicted RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 PREBQ9HCU5 417 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 CEP250Q9BV73 2442 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 RPS10-NUDT3A0A1W2PQS6 291 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ARPC1BO15143 372 aaKnown RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 PMP2P02689 132 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 RPS10P46783 165 aaKnown RBP12.34□□□□□ -0.43
NEK9-201ENST00000238616 HBG1P69891 147 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 HBG2P69892 147 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 MPEG1Q2M385 716 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ENTPD8Q5MY95 495 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 SSX9Q7RTT3 188 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 WDR31Q8NA23 367 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 ERVMER34-1Q9H9K5 563 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 COPS3Q9UNS2 423 aa12.34□□□□□ -0.43
NEK9-201ENST00000238616 SPATA31D1Q6ZQQ2 1576 aa12.33□□□□□ -0.43
NEK9-201ENST00000238616 LRP5LA4QPB2 252 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 IDUAP35475 653 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 RAB5CP51148 216 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 DCDP81605 110 aaKnown RBP12.33□□□□□ -0.44
NEK9-201ENST00000238616 FAM74A1Q5RGS3 127 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 TANGO2Q6ICL3 276 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 ADGRF3Q8IZF5 1079 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 GCNT2Q8N0V5 402 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 OR52E1Q8NGJ3 308 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 EGLN3Q9H6Z9 239 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 PLIN4Q96Q06 1357 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 CRXO43186 299 aaPredicted RBP12.33□□□□□ -0.44
NEK9-201ENST00000238616 GPR137BO60478 399 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 TNFRSF4P43489 277 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 RAC1P63000 192 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 MLF2Q15773 248 aaPredicted RBP12.33□□□□□ -0.44
NEK9-201ENST00000238616 ZNF322Q6U7Q0 402 aaPredicted RBP12.33□□□□□ -0.44
NEK9-201ENST00000238616 ZDHHC24Q6UX98 284 aa12.33□□□□□ -0.44
NEK9-201ENST00000238616 ZNF813Q6ZN06 617 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms