RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PRDM7Q9NQW5 492 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 TRAV18A0A075B6X5 111 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 TMEM72A0PK05 275 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 OR5K3A6NET4 321 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 SPINT1O43278 529 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 PAPLNO95428 1278 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 HLA-DQA2P01906 255 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 RLN2P04090 185 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 IL32P24001 234 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 CDK3Q00526 305 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 TMEM31Q5JXX7 168 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 SLC25A30Q5SVS4 291 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 RASGRP3Q8IV61 690 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 OR4N2Q8NGD1 307 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 PGLYRP3Q96LB9 341 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 BCL2L10Q9HD36 194 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 MEPEQ9NQ76 525 aaPredicted RBP15.42■□□□□ 0.06
CTDP1-201ENST00000075430 ZNF230Q9UIE0 474 aaPredicted RBP15.42■□□□□ 0.06
CTDP1-201ENST00000075430 THSD7BQ9C0I4 1608 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 A0A1W2PP55 124 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 CACNB4O00305 520 aaPredicted RBP15.42■□□□□ 0.06
CTDP1-201ENST00000075430 ANXA2P07355 339 aaKnown RBP15.42■□□□□ 0.06
CTDP1-201ENST00000075430 CTRB1P17538 263 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 KLF9Q13886 244 aaPredicted RBP15.42■□□□□ 0.06
CTDP1-201ENST00000075430 PON3Q15166 354 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 PRRT3Q5FWE3 981 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 METTL11BQ5VVY1 283 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 CTRB2Q6GPI1 263 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 TMUB2Q71RG4 321 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 ZFP82Q8N141 532 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 OR14C36Q8NHC7 312 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 STK35Q8TDR2 534 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 LCN9Q8WX39 176 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 VWCEQ96DN2 955 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 SDF2Q99470 211 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 MTHFD2LQ9H903 347 aaPredicted RBP15.42■□□□□ 0.06
CTDP1-201ENST00000075430 MOKQ9UQ07 419 aa15.42■□□□□ 0.06
CTDP1-201ENST00000075430 S100A11P31949 105 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 MMP15P51511 669 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 CBFBQ13951 182 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 ZNF77Q15935 545 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 ALG10BQ5I7T1 473 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 MFSD12Q6NUT3 480 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 LHFPL5Q8TAF8 219 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 C2CD4CQ8TF44 421 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 CPNE2Q96FN4 548 aaPredicted RBP15.41■□□□□ 0.06
CTDP1-201ENST00000075430 TMEM106CQ9BVX2 250 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 ZNF471Q9BX82 626 aaPredicted RBP15.41■□□□□ 0.06
CTDP1-201ENST00000075430 COPZ2Q9P299 210 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 FBXO4Q9UKT5 387 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 CAMK2AQ9UQM7 478 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 PLEKHA6Q9Y2H5 1048 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 F12P00748 615 aaPredicted RBP15.41■□□□□ 0.06
CTDP1-201ENST00000075430 SGCGQ13326 291 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 ERN2Q76MJ5 926 aaKnown RBP15.41■□□□□ 0.06
CTDP1-201ENST00000075430 GPAT4Q86UL3 456 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 ADGRG3Q86Y34 549 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 OR51D1Q8NGF3 324 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 OR51S1Q8NGJ8 323 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 OR10AC1Q8NH08 325 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 SMIM4Q8WVI0 70 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 KISS1RQ969F8 398 aaPredicted RBP15.41■□□□□ 0.06
CTDP1-201ENST00000075430 RSPRY1Q96DX4 576 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 SLC6A20Q9NP91 592 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 CPNE7Q9UBL6 633 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 SLC35A3Q9Y2D2 325 aa15.41■□□□□ 0.06
CTDP1-201ENST00000075430 MCRIP1C9JLW8 97 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 M0QYG6 137 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 KHNYNO15037 678 aaKnown RBP15.4■□□□□ 0.06
CTDP1-201ENST00000075430 PLPP2O43688 288 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 SUSD5O60279 629 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 LILRB3O75022 631 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 F13BP05160 661 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 DDX6P26196 483 aaKnown RBP eCLIP15.4■□□□□ 0.06
CTDP1-201ENST00000075430 NRG3P56975 720 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 DEFB110Q30KQ9 67 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 ZNF627Q7L945 461 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 PDZD9Q8IXQ8 264 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 SLC35F2Q8IXU6 374 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 FRMD1Q8N878 549 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 BRIX1Q8TDN6 353 aaKnown RBP15.4■□□□□ 0.06
CTDP1-201ENST00000075430 THEM6Q8WUY1 208 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 ZNF514Q96K75 400 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-201ENST00000075430 GPN1Q9HCN4 374 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-201ENST00000075430 G3V3Q6 166 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 BHLHE40O14503 412 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 RAB28P51157 221 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 GSG1LQ6UXU4 331 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 LRRC25Q8N386 305 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-201ENST00000075430 OR2L5Q8NG80 312 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 CASTOR1Q8WTX7 329 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 ARHGDIGQ99819 225 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 PCDHGA9Q9Y5G4 932 aaKnown RBP15.4■□□□□ 0.06
CTDP1-201ENST00000075430 MCIDASD6RGH6 385 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 SEC61A1P61619 476 aaKnown RBP15.4■□□□□ 0.06
CTDP1-201ENST00000075430 ERV3-1Q14264 604 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 AMZ1Q400G9 498 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 ZNF676Q8N7Q3 588 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 ELF4Q99607 663 aaPredicted RBP15.4■□□□□ 0.06
CTDP1-201ENST00000075430 PRSS27Q9BQR3 290 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms