RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
CHD2-223ENST00000636306 ZNF215Q9UL58 517 aaPredicted RBP12.67□□□□□ -0.38
CHD2-223ENST00000636306 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
CHD2-223ENST00000636306 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 PLEKHM2Q8IWE5 1019 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 LGR6Q9HBX8 967 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 FHOD1Q9Y613 1164 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 RPAP1Q9BWH6 1393 aaPredicted RBP12.66□□□□□ -0.38
CHD2-223ENST00000636306 DDX58O95786 925 aaKnown RBP12.66□□□□□ -0.38
CHD2-223ENST00000636306 GSPT1P15170 499 aaKnown RBP12.66□□□□□ -0.38
CHD2-223ENST00000636306 CDC25BP30305 580 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 PLA2G4AP47712 749 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 ZSCAN25Q6NSZ9 544 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 SRLQ86TD4 932 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 SPC24Q8NBT2 197 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 NFATC2IPQ8NCF5 419 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 MNS1Q8NEH6 495 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 FBXO18Q8NFZ0 1043 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 NECTIN2Q92692 538 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 JRKLQ9Y4A0 524 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 ELP1O95163 1332 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 HEG1Q9ULI3 1381 aa12.66□□□□□ -0.38
CHD2-223ENST00000636306 TUBB4AP04350 444 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 CCDC192P0DO97 292 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 ATP8B2P98198 1209 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 HSP90AB4PQ58FF6 505 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 SWT1Q5T5J6 900 aaKnown RBP12.65□□□□□ -0.38
CHD2-223ENST00000636306 CCDC186Q7Z3E2 898 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 CCDC91Q7Z6B0 441 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 CCDC191Q8NCU4 936 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 FAM200AQ8TCP9 573 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 UBXN6Q9BZV1 441 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 LRRCC1Q9C099 1032 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 ST7Q9NRC1 585 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 HYPKQ9NX55 129 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 DONSONQ9NYP3 566 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 AOX1Q06278 1338 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 MEGF6O75095 1541 aa12.65□□□□□ -0.38
CHD2-223ENST00000636306 RAB11FIP3O75154 756 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 ALDH1L1O75891 902 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 PNMA6AP0CW24 399 aaPredicted RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 ELF2Q15723 593 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 ZSCAN26Q16670 478 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 TTC31Q49AM3 519 aaPredicted RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 SUGP1Q8IWZ8 645 aaKnown RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 C10orf67Q8IYJ2 551 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 IL17RAQ96F46 866 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 AK7Q96M32 723 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 OSBPL3Q9H4L5 887 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 ARGLU1Q9NWB6 273 aaPredicted RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 KCNG1Q9UIX4 513 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 LRRFIP2Q9Y608 721 aaKnown RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 C5P01031 1676 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 TUBGCP6Q96RT7 1819 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 SMARCA5O60264 1052 aaPredicted RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 HSP90B1P14625 803 aaKnown RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 MAGEA9P43362 315 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 HSPA2P54652 639 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 PTPN14Q15678 1187 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
CHD2-223ENST00000636306 DEF6Q9H4E7 631 aa12.64□□□□□ -0.39
CHD2-223ENST00000636306 IVLP07476 585 aa12.63□□□□□ -0.39
CHD2-223ENST00000636306 PHKG2P15735 406 aa12.63□□□□□ -0.39
CHD2-223ENST00000636306 SATB1Q01826 763 aa12.63□□□□□ -0.39
CHD2-223ENST00000636306 FILIP1Q7Z7B0 1213 aa12.63□□□□□ -0.39
CHD2-223ENST00000636306 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
CHD2-223ENST00000636306 PLA2G4DQ86XP0 818 aa12.63□□□□□ -0.39
CHD2-223ENST00000636306 DCAF5Q96JK2 942 aa12.63□□□□□ -0.39
CHD2-223ENST00000636306 SLC52A2Q9HAB3 445 aa12.63□□□□□ -0.39
CHD2-223ENST00000636306 RRP15Q9Y3B9 282 aaKnown RBP12.63□□□□□ -0.39
CHD2-223ENST00000636306 KDM6AO15550 1401 aaPredicted RBP12.62□□□□□ -0.39
CHD2-223ENST00000636306 ERC2O15083 957 aa12.62□□□□□ -0.39
CHD2-223ENST00000636306 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
CHD2-223ENST00000636306 ZRANB2O95218 330 aaKnown RBP eCLIP12.62□□□□□ -0.393e-21■■■■■ 49.8
CHD2-223ENST00000636306 ZNF75DP51815 510 aa12.62□□□□□ -0.39
CHD2-223ENST00000636306 GSCP56915 257 aaPredicted RBP12.62□□□□□ -0.39
CHD2-223ENST00000636306 ANAPC15P60006 121 aa12.62□□□□□ -0.39
CHD2-223ENST00000636306 BRINP3Q76B58 766 aa12.62□□□□□ -0.39
CHD2-223ENST00000636306 NEK11Q8NG66 645 aa12.62□□□□□ -0.39
CHD2-223ENST00000636306 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
CHD2-223ENST00000636306 SOS2Q07890 1332 aaPredicted RBP12.61□□□□□ -0.39
CHD2-223ENST00000636306 TPM1P09493 284 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 EXOC4Q96A65 974 aa12.61□□□□□ -0.39
CHD2-223ENST00000636306 PHAXQ9H814 394 aaKnown RBP12.61□□□□□ -0.39
CHD2-223ENST00000636306 L2HGDHQ9H9P8 463 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms