RNA–Protein interactions for RNA: ENST00000634620.1

ATP7B-213, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 5,653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-213ENST00000634620 KDM5DQ9BY66 1539 aa12.66□□□□□ -0.38
ATP7B-213ENST00000634620 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
ATP7B-213ENST00000634620 VAMP4O75379 141 aa12.66□□□□□ -0.38
ATP7B-213ENST00000634620 SSFA2P28290 1259 aa12.66□□□□□ -0.38
ATP7B-213ENST00000634620 PRPF40BQ6NWY9 871 aaKnown RBP12.66□□□□□ -0.38
ATP7B-213ENST00000634620 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
ATP7B-213ENST00000634620 BRINP3Q76B58 766 aa12.66□□□□□ -0.38
ATP7B-213ENST00000634620 LUC7LQ9NQ29 371 aaKnown RBP12.66□□□□□ -0.38
ATP7B-213ENST00000634620 TTC37Q6PGP7 1564 aa12.65□□□□□ -0.38
ATP7B-213ENST00000634620 KIF2AO00139 706 aaPredicted RBP12.65□□□□□ -0.38
ATP7B-213ENST00000634620 SLC4A8Q2Y0W8 1093 aa12.65□□□□□ -0.38
ATP7B-213ENST00000634620 SPATA32Q96LK8 384 aa12.65□□□□□ -0.38
ATP7B-213ENST00000634620 UPF3BQ9BZI7 483 aaKnown RBP12.65□□□□□ -0.38
ATP7B-213ENST00000634620 ZBTB40Q9NUA8 1239 aa12.65□□□□□ -0.38
ATP7B-213ENST00000634620 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
ATP7B-213ENST00000634620 TRERF1Q96PN7 1200 aa12.65□□□□□ -0.38
ATP7B-213ENST00000634620 SH2B1Q9NRF2 756 aaPredicted RBP12.65□□□□□ -0.38
ATP7B-213ENST00000634620 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
ATP7B-213ENST00000634620 SEPT7Q16181 437 aaKnown RBP12.65□□□□□ -0.38
ATP7B-213ENST00000634620 C2orf69Q8N8R5 385 aa12.65□□□□□ -0.38
ATP7B-213ENST00000634620 ECE1P42892 770 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 PTPN14Q15678 1187 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 MEIS3Q99687 375 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 FLT4P35916 1363 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 TXLNBQ8N3L3 684 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 GBP3Q9H0R5 595 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 SYNMO15061 1565 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 PPIP5K2O43314 1243 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 CCDC152Q4G0S7 254 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 NACAP1Q9BZK3 213 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 LDHCP07864 332 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 TNIP1Q15025 636 aa12.64□□□□□ -0.39
ATP7B-213ENST00000634620 DZIP3Q86Y13 1208 aaKnown RBP12.64□□□□□ -0.39
ATP7B-213ENST00000634620 ANKRD62A6NC57 917 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 PHACTR3Q96KR7 559 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 EDC4Q6P2E9 1401 aaKnown RBP12.63□□□□□ -0.39
ATP7B-213ENST00000634620 CCDC83Q8IWF9 413 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 EVI5LQ96CN4 794 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 CCDC85AQ96PX6 553 aaPredicted RBP12.63□□□□□ -0.39
ATP7B-213ENST00000634620 CDK5RAP3Q96JB5 506 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 BOLA2Q9H3K6 86 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 IVNS1ABPQ9Y6Y0 642 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 SDSP20132 328 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 SYCP1Q15431 976 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 MAP3K11Q16584 847 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 DPP8Q6V1X1 898 aaPredicted RBP12.63□□□□□ -0.39
ATP7B-213ENST00000634620 TSPYL6Q8N831 410 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 SNX21Q969T3 373 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
ATP7B-213ENST00000634620 NSFL1CQ9UNZ2 370 aaKnown RBP12.63□□□□□ -0.39
ATP7B-213ENST00000634620 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 CSADQ9Y600 493 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 SBNO2Q9Y2G9 1366 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 PI4KAP2A4QPH2 592 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
ATP7B-213ENST00000634620 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 EP400NLQ6ZTU2 488 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 PI4KAP1Q8N8J0 262 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 KIF18AQ8NI77 898 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 SCLT1Q96NL6 688 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 CDKL5O76039 1030 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 ANKRD18AQ8IVF6 992 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 PICK1Q9NRD5 415 aa12.62□□□□□ -0.39
ATP7B-213ENST00000634620 SMTNL1A8MU46 457 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 ERFEQ4G0M1 354 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 GPATCH11Q8N954 259 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 CCDC8Q9H0W5 538 aaPredicted RBP12.61□□□□□ -0.39
ATP7B-213ENST00000634620 STIM1Q13586 685 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 ARHGAP29Q52LW3 1261 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 MYOM2P54296 1465 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
ATP7B-213ENST00000634620 UTP14AQ9BVJ6 771 aaKnown RBP12.61□□□□□ -0.39
ATP7B-213ENST00000634620 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 DCTPP1Q9H773 170 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 LRP2BPQ9P2M1 347 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 A2ML1A8K2U0 1454 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 CCDC69A6NI79 296 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 B4DLN1 442 aa12.61□□□□□ -0.39
ATP7B-213ENST00000634620 SNRPA1P09661 255 aaKnown RBP12.61□□□□□ -0.39
ATP7B-213ENST00000634620 GTF2F1P35269 517 aaKnown RBP eCLIP12.61□□□□□ -0.39
ATP7B-213ENST00000634620 MRPL12P52815 198 aaKnown RBP12.61□□□□□ -0.39
ATP7B-213ENST00000634620 IMMTQ16891 758 aaKnown RBP12.61□□□□□ -0.39
ATP7B-213ENST00000634620 PRDM15P57071 1507 aaPredicted RBP12.61□□□□□ -0.39
ATP7B-213ENST00000634620 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
ATP7B-213ENST00000634620 EPB41L2O43491 1005 aaKnown RBP12.6□□□□□ -0.39
ATP7B-213ENST00000634620 PDE1AP54750 535 aa12.6□□□□□ -0.39
ATP7B-213ENST00000634620 ATP8B2P98198 1209 aa12.6□□□□□ -0.39
ATP7B-213ENST00000634620 TRIM22Q8IYM9 498 aa12.6□□□□□ -0.39
ATP7B-213ENST00000634620 KCNQ2O43526 872 aa12.6□□□□□ -0.39
ATP7B-213ENST00000634620 ZNF804AQ7Z570 1209 aa12.6□□□□□ -0.39
ATP7B-213ENST00000634620 DEFB132Q7Z7B7 95 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms