RNA–Protein interactions for RNA: ENST00000626960.2

BCAS3-233, Transcript of BCAS3, microtubule associated cell migration factor, human

TSL 5 BASIC

Gene BCAS3, Length 227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-233	ENST00000626960	DNAAF4	Q8WXU2	420 aa		11.94	□□□□□ -0.5
BCAS3-233	ENST00000626960	CDCA7L	Q96GN5	454 aa		11.94	□□□□□ -0.5
BCAS3-233	ENST00000626960	VPS33B	Q9H267	617 aa		11.94	□□□□□ -0.5
BCAS3-233	ENST00000626960	NMRK2	Q9NPI5	230 aa		11.94	□□□□□ -0.5
BCAS3-233	ENST00000626960	CEP350	Q5VT06	3117 aa		11.94	□□□□□ -0.5
BCAS3-233	ENST00000626960	WDR90	Q96KV7	1748 aa		11.94	□□□□□ -0.5
BCAS3-233	ENST00000626960	KDM2B	Q8NHM5	1336 aa		11.93	□□□□□ -0.5
BCAS3-233	ENST00000626960	FZD9	O00144	591 aa		11.93	□□□□□ -0.5
BCAS3-233	ENST00000626960	PDE8A	O60658	829 aa		11.93	□□□□□ -0.5
BCAS3-233	ENST00000626960	HSP90B1	P14625	803 aa	Known RBP	11.93	□□□□□ -0.5
BCAS3-233	ENST00000626960	GCKR	Q14397	625 aa		11.93	□□□□□ -0.5
BCAS3-233	ENST00000626960	CWF19L2	Q2TBE0	894 aa	Known RBP	11.93	□□□□□ -0.5
BCAS3-233	ENST00000626960	ZNF526	Q8TF50	670 aa	Predicted RBP	11.93	□□□□□ -0.5
BCAS3-233	ENST00000626960	PLA2G12B	Q9BX93	195 aa		11.93	□□□□□ -0.5
BCAS3-233	ENST00000626960	TAF1	P21675	1872 aa		11.93	□□□□□ -0.5
BCAS3-233	ENST00000626960	RTL9	Q8NET4	1388 aa		11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	DUOX1	Q9NRD9	1551 aa		11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	LTBP1	Q14766	1721 aa		11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	IARS	P41252	1262 aa	Known RBP	11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	NEXN	Q0ZGT2	675 aa		11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	FKBP5	Q13451	457 aa	Predicted RBP	11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	BEND3	Q5T5X7	828 aa		11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	DDX46	Q7L014	1031 aa	Known RBP	11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	CELF1	Q92879	486 aa	Known RBP	11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.92	□□□□□ -0.5
BCAS3-233	ENST00000626960	TOMM70	O94826	608 aa		11.91	□□□□□ -0.5
BCAS3-233	ENST00000626960	CT47B1	P0C2W7	299 aa	Predicted RBP	11.91	□□□□□ -0.5
BCAS3-233	ENST00000626960	BRPF1	P55201	1214 aa	Predicted RBP	11.91	□□□□□ -0.5
BCAS3-233	ENST00000626960	MRPL50	Q8N5N7	158 aa	Known RBP	11.91	□□□□□ -0.5
BCAS3-233	ENST00000626960	TTLL11	Q8NHH1	800 aa		11.91	□□□□□ -0.5
BCAS3-233	ENST00000626960	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.91	□□□□□ -0.5
BCAS3-233	ENST00000626960	CSF1R	P07333	972 aa		11.9	□□□□□ -0.5
BCAS3-233	ENST00000626960	RPS8	P62241	208 aa	Known RBP	11.9	□□□□□ -0.5
BCAS3-233	ENST00000626960	ALDH1L2	Q3SY69	923 aa		11.9	□□□□□ -0.5
BCAS3-233	ENST00000626960	RTL5	Q5HYW3	569 aa	Predicted RBP	11.9	□□□□□ -0.5
BCAS3-233	ENST00000626960	SEC31B	Q9NQW1	1179 aa		11.9	□□□□□ -0.5
BCAS3-233	ENST00000626960		F6X3S4	739 aa		11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	VEGFA	P15692	232 aa	Predicted RBP	11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	CTSW	P56202	376 aa		11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	CCDC152	Q4G0S7	254 aa		11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	DPY19L2	Q6NUT2	758 aa		11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	RBM46	Q8TBY0	533 aa	Known RBP	11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	SSH1	Q8WYL5	1049 aa		11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	JARID2	Q92833	1246 aa	Predicted RBP	11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	RRAGC	Q9HB90	399 aa		11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	PODXL2	Q9NZ53	605 aa		11.89	□□□□□ -0.51
BCAS3-233	ENST00000626960	UTY	O14607	1347 aa		11.88	□□□□□ -0.51
BCAS3-233	ENST00000626960	ZNF541	Q9H0D2	1346 aa		11.88	□□□□□ -0.51
BCAS3-233	ENST00000626960	MYH3	P11055	1940 aa		11.88	□□□□□ -0.51
BCAS3-233	ENST00000626960	ALDH1L1	O75891	902 aa		11.88	□□□□□ -0.51
BCAS3-233	ENST00000626960	DDN	O94850	711 aa	Predicted RBP	11.88	□□□□□ -0.51
BCAS3-233	ENST00000626960	KIAA2012	Q0VF49	1180 aa		11.88	□□□□□ -0.51
BCAS3-233	ENST00000626960	UBE3B	Q7Z3V4	1068 aa		11.88	□□□□□ -0.51
BCAS3-233	ENST00000626960	MPND	Q8N594	471 aa		11.88	□□□□□ -0.51
BCAS3-233	ENST00000626960	SUPT20H	Q8NEM7	779 aa		11.88	□□□□□ -0.51
BCAS3-233	ENST00000626960	PTPRC	P08575	1304 aa		11.87	□□□□□ -0.51
BCAS3-233	ENST00000626960	DPP8	Q6V1X1	898 aa	Predicted RBP	11.87	□□□□□ -0.51
BCAS3-233	ENST00000626960	FOXO4	P98177	505 aa		11.86	□□□□□ -0.51
BCAS3-233	ENST00000626960	FSTL1	Q12841	308 aa		11.86	□□□□□ -0.51
BCAS3-233	ENST00000626960	GPC2	Q8N158	579 aa		11.86	□□□□□ -0.51
BCAS3-233	ENST00000626960	BSDC1	Q9NW68	430 aa	Predicted RBP	11.86	□□□□□ -0.51
BCAS3-233	ENST00000626960	POLL	Q9UGP5	575 aa		11.86	□□□□□ -0.51
BCAS3-233	ENST00000626960	SCN4A	P35499	1836 aa		11.86	□□□□□ -0.51
BCAS3-233	ENST00000626960	GRM8	O00222	908 aa		11.85	□□□□□ -0.51
BCAS3-233	ENST00000626960	GPSM2	P81274	684 aa		11.85	□□□□□ -0.51
BCAS3-233	ENST00000626960	AOC3	Q16853	763 aa		11.85	□□□□□ -0.51
BCAS3-233	ENST00000626960	LARGE2	Q8N3Y3	721 aa		11.85	□□□□□ -0.51
BCAS3-233	ENST00000626960	JDP2	Q8WYK2	163 aa		11.85	□□□□□ -0.51
BCAS3-233	ENST00000626960	KAZALD1	Q96I82	304 aa		11.85	□□□□□ -0.51
BCAS3-233	ENST00000626960	TMX4	Q9H1E5	349 aa	Predicted RBP	11.85	□□□□□ -0.51
BCAS3-233	ENST00000626960	GREM2	Q9H772	168 aa		11.85	□□□□□ -0.51
BCAS3-233	ENST00000626960	ADAMTSL1	Q8N6G6	1762 aa		11.84	□□□□□ -0.51
BCAS3-233	ENST00000626960	PPIP5K2	O43314	1243 aa		11.84	□□□□□ -0.51
BCAS3-233	ENST00000626960	HSPA6	P17066	643 aa		11.84	□□□□□ -0.51
BCAS3-233	ENST00000626960	RARS	P54136	660 aa	Known RBP	11.84	□□□□□ -0.51
BCAS3-233	ENST00000626960	EPHA10	Q5JZY3	1008 aa		11.84	□□□□□ -0.51
BCAS3-233	ENST00000626960	TBC1D16	Q8TBP0	767 aa		11.84	□□□□□ -0.51
BCAS3-233	ENST00000626960	CDC5L	Q99459	802 aa	Known RBP	11.84	□□□□□ -0.51
BCAS3-233	ENST00000626960	SRCIN1	Q9C0H9	1055 aa		11.84	□□□□□ -0.51
BCAS3-233	ENST00000626960	ZNRF3	Q9ULT6	936 aa		11.84	□□□□□ -0.51
BCAS3-233	ENST00000626960	IQCA1L	A6NCM1	817 aa		11.83	□□□□□ -0.52
BCAS3-233	ENST00000626960	YDJC	A8MPS7	323 aa		11.83	□□□□□ -0.52
BCAS3-233	ENST00000626960	CXCL9	Q07325	125 aa		11.83	□□□□□ -0.52
BCAS3-233	ENST00000626960	ANKRD18A	Q8IVF6	992 aa		11.83	□□□□□ -0.52
BCAS3-233	ENST00000626960	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.83	□□□□□ -0.52
BCAS3-233	ENST00000626960	MINPP1	Q9UNW1	487 aa		11.83	□□□□□ -0.52
BCAS3-233	ENST00000626960	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.83	□□□□□ -0.52
BCAS3-233	ENST00000626960	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	ITGA6	P23229	1130 aa		11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	SCNN1D	P51172	638 aa		11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	EIF6	P56537	245 aa	Known RBP	11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	FAM161A	Q3B820	660 aa		11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	RABL6	Q3YEC7	729 aa	Predicted RBP	11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	NIM1K	Q8IY84	436 aa		11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	SMC1B	Q8NDV3	1235 aa		11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	ARHGAP45	Q92619	1136 aa		11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	USP44	Q9H0E7	712 aa		11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	XDH	P47989	1333 aa		11.82	□□□□□ -0.52
BCAS3-233	ENST00000626960	ZNF609	O15014	1411 aa		11.81	□□□□□ -0.52

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