RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 BBOX1O75936 387 aa17.59■□□□□ 0.41
SOX2-OT-241ENST00000626948 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-241ENST00000626948 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-241ENST00000626948 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-241ENST00000626948 GNAI1P63096 354 aa17.58■□□□□ 0.4
SOX2-OT-241ENST00000626948 CXCL9Q07325 125 aa17.58■□□□□ 0.4
SOX2-OT-241ENST00000626948 TRIM28Q13263 835 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-241ENST00000626948 SF3B3Q15393 1217 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-241ENST00000626948 CNTNAP1P78357 1384 aa17.57■□□□□ 0.4
SOX2-OT-241ENST00000626948 YDJCA8MPS7 323 aa17.57■□□□□ 0.4
SOX2-OT-241ENST00000626948 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
SOX2-OT-241ENST00000626948 CNTROBQ8N137 903 aa17.57■□□□□ 0.4
SOX2-OT-241ENST00000626948 KIAA2012Q0VF49 1180 aa17.56■□□□□ 0.4
SOX2-OT-241ENST00000626948 DPP8Q6V1X1 898 aaPredicted RBP17.56■□□□□ 0.4
SOX2-OT-241ENST00000626948 PNMA8AQ86V59 439 aaPredicted RBP17.56■□□□□ 0.4
SOX2-OT-241ENST00000626948 NIM1KQ8IY84 436 aa17.56■□□□□ 0.4
SOX2-OT-241ENST00000626948 MPNDQ8N594 471 aa17.56■□□□□ 0.4
SOX2-OT-241ENST00000626948 TSR2Q969E8 191 aaKnown RBP17.56■□□□□ 0.4
SOX2-OT-241ENST00000626948 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
SOX2-OT-241ENST00000626948 SHTN1A0MZ66 631 aa17.55■□□□□ 0.4
SOX2-OT-241ENST00000626948 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
SOX2-OT-241ENST00000626948 VPS33BQ9H267 617 aa17.55■□□□□ 0.4
SOX2-OT-241ENST00000626948 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
SOX2-OT-241ENST00000626948 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
SOX2-OT-241ENST00000626948 IRS4O14654 1257 aaPredicted RBP17.54■□□□□ 0.4
SOX2-OT-241ENST00000626948 MYD88Q99836 296 aa17.54■□□□□ 0.4
SOX2-OT-241ENST00000626948 SEC31BQ9NQW1 1179 aa17.54■□□□□ 0.4
SOX2-OT-241ENST00000626948 GPRC5DQ9NZD1 345 aa17.54■□□□□ 0.4
SOX2-OT-241ENST00000626948 VEGFBP49765 207 aa17.53■□□□□ 0.4
SOX2-OT-241ENST00000626948 RIC3Q7Z5B4 369 aa17.53■□□□□ 0.4
SOX2-OT-241ENST00000626948 WWC1Q8IX03 1113 aa17.53■□□□□ 0.4
SOX2-OT-241ENST00000626948 POLLQ9UGP5 575 aa17.53■□□□□ 0.4
SOX2-OT-241ENST00000626948 TRAF5O00463 557 aa17.52■□□□□ 0.4
SOX2-OT-241ENST00000626948 RAD17O75943 681 aa17.52■□□□□ 0.4
SOX2-OT-241ENST00000626948 GMPSP49915 693 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-241ENST00000626948 HIRAP54198 1017 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-241ENST00000626948 GPSM2P81274 684 aa17.52■□□□□ 0.4
SOX2-OT-241ENST00000626948 ZBTB38Q8NAP3 1195 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-241ENST00000626948 SUPT20HQ8NEM7 779 aa17.52■□□□□ 0.4
SOX2-OT-241ENST00000626948 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-241ENST00000626948 KCNQ5Q9NR82 932 aa17.52■□□□□ 0.4
SOX2-OT-241ENST00000626948 SCN9AQ15858 1988 aa17.51■□□□□ 0.39
SOX2-OT-241ENST00000626948 IGKV5-2P06315 115 aa17.51■□□□□ 0.39
SOX2-OT-241ENST00000626948 CCDC27Q2M243 656 aa17.51■□□□□ 0.39
SOX2-OT-241ENST00000626948 CST9Q5W186 159 aa17.51■□□□□ 0.39
SOX2-OT-241ENST00000626948 USP50Q70EL3 339 aaPredicted RBP17.51■□□□□ 0.39
SOX2-OT-241ENST00000626948 G2E3Q7L622 706 aa17.51■□□□□ 0.39
SOX2-OT-241ENST00000626948 METTL22Q9BUU2 404 aaPredicted RBP17.51■□□□□ 0.39
SOX2-OT-241ENST00000626948 RASSF10A6NK89 507 aa17.5■□□□□ 0.39
SOX2-OT-241ENST00000626948 LMOD1P29536 600 aaPredicted RBP17.5■□□□□ 0.39
SOX2-OT-241ENST00000626948 CALD1Q05682 793 aaKnown RBP17.5■□□□□ 0.39
SOX2-OT-241ENST00000626948 GOLGA2Q08379 1002 aa17.5■□□□□ 0.39
SOX2-OT-241ENST00000626948 CIAPIN1Q6FI81 312 aa17.5■□□□□ 0.39
SOX2-OT-241ENST00000626948 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 TMC4Q7Z404 712 aa17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 TRPM4Q8TD43 1214 aa17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 ADARB2Q9NS39 739 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 MAP3K2Q9Y2U5 619 aa17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 ZBTB12Q9Y330 459 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 TRPM7Q96QT4 1865 aa17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 RTL9Q8NET4 1388 aa17.49■□□□□ 0.39
SOX2-OT-241ENST00000626948 WTIPA6NIX2 430 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-241ENST00000626948 FOXN1O15353 648 aa17.48■□□□□ 0.39
SOX2-OT-241ENST00000626948 CCDC30Q5VVM6 783 aa17.48■□□□□ 0.39
SOX2-OT-241ENST00000626948 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
SOX2-OT-241ENST00000626948 DBNDD1Q9H9R9 158 aa17.48■□□□□ 0.39
SOX2-OT-241ENST00000626948 PGAP2Q9UHJ9 254 aa17.48■□□□□ 0.39
SOX2-OT-241ENST00000626948 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
SOX2-OT-241ENST00000626948 PSMD14O00487 310 aa17.47■□□□□ 0.39
SOX2-OT-241ENST00000626948 RIMBP2O15034 1052 aa17.47■□□□□ 0.39
SOX2-OT-241ENST00000626948 EGFRP00533 1210 aa17.47■□□□□ 0.39
SOX2-OT-241ENST00000626948 WASHC4Q2M389 1173 aa17.47■□□□□ 0.39
SOX2-OT-241ENST00000626948 DLK2Q6UY11 383 aa17.47■□□□□ 0.39
SOX2-OT-241ENST00000626948 PI4KAP1Q8N8J0 262 aa17.47■□□□□ 0.39
SOX2-OT-241ENST00000626948 CCDC85AQ96PX6 553 aaPredicted RBP17.47■□□□□ 0.39
SOX2-OT-241ENST00000626948 DOK7Q18PE1 504 aa17.46■□□□□ 0.39
SOX2-OT-241ENST00000626948 CWF19L2Q2TBE0 894 aaKnown RBP17.46■□□□□ 0.39
SOX2-OT-241ENST00000626948 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
SOX2-OT-241ENST00000626948 GLIS2Q9BZE0 524 aaPredicted RBP17.46■□□□□ 0.39
SOX2-OT-241ENST00000626948 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
SOX2-OT-241ENST00000626948 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
SOX2-OT-241ENST00000626948 PODXL2Q9NZ53 605 aa17.46■□□□□ 0.39
SOX2-OT-241ENST00000626948 THSD7BQ9C0I4 1608 aa17.46■□□□□ 0.39
SOX2-OT-241ENST00000626948 PDE8AO60658 829 aa17.45■□□□□ 0.38
SOX2-OT-241ENST00000626948 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
SOX2-OT-241ENST00000626948 TWISTNBQ3B726 338 aaPredicted RBP17.45■□□□□ 0.38
SOX2-OT-241ENST00000626948 CNOT7Q9UIV1 285 aaKnown RBP17.45■□□□□ 0.38
SOX2-OT-241ENST00000626948 CDHR2Q9BYE9 1310 aa17.45■□□□□ 0.38
SOX2-OT-241ENST00000626948 C6orf229H3BNL8 230 aa17.44■□□□□ 0.38
SOX2-OT-241ENST00000626948 MRS2Q9HD23 443 aa17.44■□□□□ 0.38
SOX2-OT-241ENST00000626948 WBP1LQ9NX94 342 aa17.44■□□□□ 0.38
SOX2-OT-241ENST00000626948 ZNF646O15015 1829 aaPredicted RBP17.44■□□□□ 0.38
SOX2-OT-241ENST00000626948 SPEF2Q9C093 1822 aa17.44■□□□□ 0.38
SOX2-OT-241ENST00000626948 IL16Q14005 1332 aa17.44■□□□□ 0.38
SOX2-OT-241ENST00000626948 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
SOX2-OT-241ENST00000626948 MYH3P11055 1940 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms