RNA–Protein interactions for RNA: ENST00000617454.4

PDE4DIP-244, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 3

Gene PDE4DIP, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-244ENST00000617454 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
PDE4DIP-244ENST00000617454 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
PDE4DIP-244ENST00000617454 SBF1O95248 1867 aa13.64□□□□□ -0.23
PDE4DIP-244ENST00000617454 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
PDE4DIP-244ENST00000617454 ZNF784Q8NCA9 323 aaPredicted RBP13.64□□□□□ -0.23
PDE4DIP-244ENST00000617454 MYH3P11055 1940 aa13.64□□□□□ -0.23
PDE4DIP-244ENST00000617454 NFKBIEO00221 500 aa13.63□□□□□ -0.23
PDE4DIP-244ENST00000617454 CTSWP56202 376 aa13.63□□□□□ -0.23
PDE4DIP-244ENST00000617454 FKBP4Q02790 459 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDE4DIP-244ENST00000617454 BEND3Q5T5X7 828 aa13.63□□□□□ -0.23
PDE4DIP-244ENST00000617454 C7orf43Q8WVR3 580 aa13.63□□□□□ -0.23
PDE4DIP-244ENST00000617454 CDC5LQ99459 802 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-244ENST00000617454 GPBP1L1Q9HC44 474 aaPredicted RBP13.63□□□□□ -0.23
PDE4DIP-244ENST00000617454 ATP6V0A2Q9Y487 856 aa13.63□□□□□ -0.23
PDE4DIP-244ENST00000617454 CCDC88AQ3V6T2 1871 aa13.63□□□□□ -0.23
PDE4DIP-244ENST00000617454 H7C1W4 665 aa13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 SP8Q8IXZ3 490 aa13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 SUPT20HQ8NEM7 779 aa13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 JARID2Q92833 1246 aaPredicted RBP13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 PSMD1Q99460 953 aa13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 KDM2BQ8NHM5 1336 aa13.62□□□□□ -0.23
PDE4DIP-244ENST00000617454 GRM8O00222 908 aa13.61□□□□□ -0.23
PDE4DIP-244ENST00000617454 RPS8P62241 208 aaKnown RBP13.61□□□□□ -0.23
PDE4DIP-244ENST00000617454 PLA2G12BQ9BX93 195 aa13.61□□□□□ -0.23
PDE4DIP-244ENST00000617454 CCT4P50991 539 aaKnown RBP13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 ANKRD18AQ8IVF6 992 aa13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 MPNDQ8N594 471 aa13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 JDP2Q8WYK2 163 aa13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 CCDC85AQ96PX6 553 aaPredicted RBP13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
PDE4DIP-244ENST00000617454 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
PDE4DIP-244ENST00000617454 IARSP41252 1262 aaKnown RBP13.59□□□□□ -0.23
PDE4DIP-244ENST00000617454 OLFM4Q6UX06 510 aa13.59□□□□□ -0.23
PDE4DIP-244ENST00000617454 TTLL11Q8NHH1 800 aa13.59□□□□□ -0.23
PDE4DIP-244ENST00000617454 ARHGAP45Q92619 1136 aa13.59□□□□□ -0.23
PDE4DIP-244ENST00000617454 CELF1Q92879 486 aaKnown RBP13.59□□□□□ -0.23
PDE4DIP-244ENST00000617454 ZNF277Q9NRM2 450 aaPredicted RBP13.59□□□□□ -0.23
PDE4DIP-244ENST00000617454 HDAC5Q9UQL6 1122 aa13.59□□□□□ -0.23
PDE4DIP-244ENST00000617454 CHMP3Q9Y3E7 222 aa13.59□□□□□ -0.23
PDE4DIP-244ENST00000617454 RTL9Q8NET4 1388 aa13.58□□□□□ -0.23
PDE4DIP-244ENST00000617454 IGHMBP2P38935 993 aaKnown RBP13.58□□□□□ -0.24
PDE4DIP-244ENST00000617454 VPS33BQ9H267 617 aa13.58□□□□□ -0.24
PDE4DIP-244ENST00000617454 SEC31BQ9NQW1 1179 aa13.58□□□□□ -0.24
PDE4DIP-244ENST00000617454 TAF1P21675 1872 aa13.58□□□□□ -0.24
PDE4DIP-244ENST00000617454 ANKRD18BA2A2Z9 1011 aa13.57□□□□□ -0.24
PDE4DIP-244ENST00000617454 PPIP5K2O43314 1243 aa13.57□□□□□ -0.24
PDE4DIP-244ENST00000617454 TAF7LQ5H9L4 462 aa13.57□□□□□ -0.24
PDE4DIP-244ENST00000617454 LARGE2Q8N3Y3 721 aa13.57□□□□□ -0.24
PDE4DIP-244ENST00000617454 FRAT1Q92837 279 aaPredicted RBP13.57□□□□□ -0.24
PDE4DIP-244ENST00000617454 MPHOSPH8Q99549 860 aa13.57□□□□□ -0.24
PDE4DIP-244ENST00000617454 GREM2Q9H772 168 aa13.57□□□□□ -0.24
PDE4DIP-244ENST00000617454 ANKIB1Q9P2G1 1089 aa13.57□□□□□ -0.24
PDE4DIP-244ENST00000617454 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
PDE4DIP-244ENST00000617454 ITGA6P23229 1130 aa13.56□□□□□ -0.24
PDE4DIP-244ENST00000617454 CASP7P55210 303 aa13.56□□□□□ -0.24
PDE4DIP-244ENST00000617454 EIF6P56537 245 aaKnown RBP13.56□□□□□ -0.24
PDE4DIP-244ENST00000617454 IFIT5Q13325 482 aaKnown RBP13.56□□□□□ -0.24
PDE4DIP-244ENST00000617454 CCDC57Q2TAC2 916 aa13.56□□□□□ -0.24
PDE4DIP-244ENST00000617454 NIM1KQ8IY84 436 aa13.56□□□□□ -0.24
PDE4DIP-244ENST00000617454 EYA3Q99504 573 aa13.56□□□□□ -0.24
PDE4DIP-244ENST00000617454 LRRC37AA6NMS7 1700 aa13.56□□□□□ -0.24
PDE4DIP-244ENST00000617454 GLTPD2A6NH11 291 aa13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 C6orf229H3BNL8 230 aa13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 PRELPP51888 382 aa13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 ZKSCAN2Q63HK3 967 aa13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 ATF7IPQ6VMQ6 1270 aa13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 RTFDC1Q9BY42 306 aaPredicted RBP13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 BSDC1Q9NW68 430 aaPredicted RBP13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 SNED1Q8TER0 1413 aa13.55□□□□□ -0.24
PDE4DIP-244ENST00000617454 BCAR3O75815 825 aa13.54□□□□□ -0.24
PDE4DIP-244ENST00000617454 CSF1RP07333 972 aa13.54□□□□□ -0.24
PDE4DIP-244ENST00000617454 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
PDE4DIP-244ENST00000617454 LMBR1LQ6UX01 489 aa13.54□□□□□ -0.24
PDE4DIP-244ENST00000617454 FTSJ3Q8IY81 847 aaKnown RBP13.54□□□□□ -0.24
PDE4DIP-244ENST00000617454 GGA1Q9UJY5 639 aa13.54□□□□□ -0.24
PDE4DIP-244ENST00000617454 UTYO14607 1347 aa13.54□□□□□ -0.24
PDE4DIP-244ENST00000617454 XDHP47989 1333 aa13.54□□□□□ -0.24
PDE4DIP-244ENST00000617454 G3V3G9 751 aa13.53□□□□□ -0.24
PDE4DIP-244ENST00000617454 UBTFL1P0CB47 393 aaPredicted RBP13.53□□□□□ -0.24
PDE4DIP-244ENST00000617454 FOXO4P98177 505 aa13.53□□□□□ -0.24
PDE4DIP-244ENST00000617454 AOC3Q16853 763 aa13.53□□□□□ -0.24
PDE4DIP-244ENST00000617454 WASHC4Q2M389 1173 aa13.53□□□□□ -0.24
PDE4DIP-244ENST00000617454 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
PDE4DIP-244ENST00000617454 ANKRD2Q9GZV1 360 aa13.53□□□□□ -0.24
PDE4DIP-244ENST00000617454 SPEF2Q9C093 1822 aa13.53□□□□□ -0.24
PDE4DIP-244ENST00000617454 UFL1O94874 794 aa13.52□□□□□ -0.25
PDE4DIP-244ENST00000617454 TRIM27P14373 513 aa13.52□□□□□ -0.25
PDE4DIP-244ENST00000617454 GPSM2P81274 684 aa13.52□□□□□ -0.25
PDE4DIP-244ENST00000617454 KIAA2012Q0VF49 1180 aa13.52□□□□□ -0.25
PDE4DIP-244ENST00000617454 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms