RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 PTPRCP08575 1304 aa32.2■■■□□ 2.74
SURF1-205ENST00000615505 ZNF526Q8TF50 670 aaPredicted RBP32.19■■■□□ 2.74
SURF1-205ENST00000615505 BCL2L13Q9BXK5 485 aa32.19■■■□□ 2.74
SURF1-205ENST00000615505 GPBP1L1Q9HC44 474 aaPredicted RBP32.19■■■□□ 2.74
SURF1-205ENST00000615505 ATP6V0A2Q9Y487 856 aa32.19■■■□□ 2.74
SURF1-205ENST00000615505 ZC3H4Q9UPT8 1303 aaKnown RBP32.19■■■□□ 2.74
SURF1-205ENST00000615505 CCDC152Q4G0S7 254 aa32.18■■■□□ 2.74
SURF1-205ENST00000615505 SLC4A10Q6U841 1118 aa32.18■■■□□ 2.74
SURF1-205ENST00000615505 UBE3BQ7Z3V4 1068 aa32.18■■■□□ 2.74
SURF1-205ENST00000615505 TMC4Q7Z404 712 aa32.18■■■□□ 2.74
SURF1-205ENST00000615505 SP8Q8IXZ3 490 aa32.17■■■□□ 2.74
SURF1-205ENST00000615505 PSMD1Q99460 953 aa32.16■■■□□ 2.74
SURF1-205ENST00000615505 ZBED9Q6R2W3 1325 aa32.16■■■□□ 2.74
SURF1-205ENST00000615505 SRCIN1Q9C0H9 1055 aa32.14■■■□□ 2.74
SURF1-205ENST00000615505 CCDC88AQ3V6T2 1871 aa32.14■■■□□ 2.74
SURF1-205ENST00000615505 ALDH1L1O75891 902 aa32.13■■■□□ 2.73
SURF1-205ENST00000615505 CTSWP56202 376 aa32.13■■■□□ 2.73
SURF1-205ENST00000615505 CELF1Q92879 486 aaKnown RBP32.13■■■□□ 2.73
SURF1-205ENST00000615505 ZNF277Q9NRM2 450 aaPredicted RBP32.13■■■□□ 2.73
SURF1-205ENST00000615505 SNED1Q8TER0 1413 aa32.12■■■□□ 2.73
SURF1-205ENST00000615505 RPS8P62241 208 aaKnown RBP32.12■■■□□ 2.73
SURF1-205ENST00000615505 KDM2BQ8NHM5 1336 aa32.11■■■□□ 2.73
SURF1-205ENST00000615505 RARSP54136 660 aaKnown RBP32.11■■■□□ 2.73
SURF1-205ENST00000615505 CCDC85AQ96PX6 553 aaPredicted RBP32.11■■■□□ 2.73
SURF1-205ENST00000615505 PLA2G12BQ9BX93 195 aa32.11■■■□□ 2.73
SURF1-205ENST00000615505 BRPF1P55201 1214 aaPredicted RBP32.1■■■□□ 2.73
SURF1-205ENST00000615505 CASP7P55210 303 aa32.1■■■□□ 2.73
SURF1-205ENST00000615505 TTLL11Q8NHH1 800 aa32.1■■■□□ 2.73
SURF1-205ENST00000615505 SEC31BQ9NQW1 1179 aa32.1■■■□□ 2.73
SURF1-205ENST00000615505 C9orf78Q9NZ63 289 aaPredicted RBP32.1■■■□□ 2.73
SURF1-205ENST00000615505 IARSP41252 1262 aaKnown RBP32.09■■■□□ 2.73
SURF1-205ENST00000615505 MPNDQ8N594 471 aa32.09■■■□□ 2.73
SURF1-205ENST00000615505 DPY19L2Q6NUT2 758 aa32.08■■■□□ 2.73
SURF1-205ENST00000615505 DPP8Q6V1X1 898 aaPredicted RBP32.08■■■□□ 2.73
SURF1-205ENST00000615505 SLC51AQ86UW1 340 aa32.08■■■□□ 2.73
SURF1-205ENST00000615505 SUPT20HQ8NEM7 779 aa32.08■■■□□ 2.73
SURF1-205ENST00000615505 TAF1P21675 1872 aa32.08■■■□□ 2.73
SURF1-205ENST00000615505 GRM8O00222 908 aa32.07■■■□□ 2.72
SURF1-205ENST00000615505 DICER1Q9UPY3 1922 aaKnown RBP32.06■■■□□ 2.72
SURF1-205ENST00000615505 CDC5LQ99459 802 aaKnown RBP32.06■■■□□ 2.72
SURF1-205ENST00000615505 NOB1Q9ULX3 412 aaKnown RBP32.06■■■□□ 2.72
SURF1-205ENST00000615505 GLTPD2A6NH11 291 aa32.05■■■□□ 2.72
SURF1-205ENST00000615505 ANKRD18AQ8IVF6 992 aa32.05■■■□□ 2.72
SURF1-205ENST00000615505 JDP2Q8WYK2 163 aa32.05■■■□□ 2.72
SURF1-205ENST00000615505 TIAM2Q8IVF5 1701 aa32.05■■■□□ 2.72
SURF1-205ENST00000615505 RTFDC1Q9BY42 306 aaPredicted RBP32.04■■■□□ 2.72
SURF1-205ENST00000615505 VPS33BQ9H267 617 aa32.04■■■□□ 2.72
SURF1-205ENST00000615505 GREM2Q9H772 168 aa32.04■■■□□ 2.72
SURF1-205ENST00000615505 RTL9Q8NET4 1388 aa32.04■■■□□ 2.72
SURF1-205ENST00000615505 API5Q9BZZ5 524 aaKnown RBP32.03■■■□□ 2.72
SURF1-205ENST00000615505 KIF16BQ96L93 1317 aa32.02■■■□□ 2.72
SURF1-205ENST00000615505 MYH3P11055 1940 aa32.02■■■□□ 2.72
SURF1-205ENST00000615505 CSF1RP07333 972 aa32.02■■■□□ 2.72
SURF1-205ENST00000615505 LARGE2Q8N3Y3 721 aa32.02■■■□□ 2.72
SURF1-205ENST00000615505 NSFL1CQ9UNZ2 370 aaKnown RBP32.02■■■□□ 2.72
SURF1-205ENST00000615505 PPIP5K2O43314 1243 aa32■■■□□ 2.71
SURF1-205ENST00000615505 NMRK2Q9NPI5 230 aa32■■■□□ 2.71
SURF1-205ENST00000615505 ARHGAP45Q92619 1136 aa31.99■■■□□ 2.71
SURF1-205ENST00000615505 COL4A1P02462 1669 aa31.99■■■□□ 2.71
SURF1-205ENST00000615505 LRRC37AA6NMS7 1700 aa31.98■■■□□ 2.71
SURF1-205ENST00000615505 ITGA6P23229 1130 aa31.98■■■□□ 2.71
SURF1-205ENST00000615505 GPSM2P81274 684 aa31.98■■■□□ 2.71
SURF1-205ENST00000615505 FOXO4P98177 505 aa31.98■■■□□ 2.71
SURF1-205ENST00000615505 IPO8O15397 1037 aaKnown RBP31.97■■■□□ 2.71
SURF1-205ENST00000615505 CCT4P50991 539 aaKnown RBP31.97■■■□□ 2.71
SURF1-205ENST00000615505 AOC3Q16853 763 aa31.97■■■□□ 2.71
SURF1-205ENST00000615505 FAM161AQ3B820 660 aa31.97■■■□□ 2.71
SURF1-205ENST00000615505 RRAGCQ9HB90 399 aa31.97■■■□□ 2.71
SURF1-205ENST00000615505 BSDC1Q9NW68 430 aaPredicted RBP31.97■■■□□ 2.71
SURF1-205ENST00000615505 UTYO14607 1347 aa31.97■■■□□ 2.71
SURF1-205ENST00000615505 FZD9O00144 591 aa31.96■■■□□ 2.71
SURF1-205ENST00000615505 KIF3CO14782 793 aa31.96■■■□□ 2.71
SURF1-205ENST00000615505 NBPF7P0C2Y1 421 aaPredicted RBP31.96■■■□□ 2.71
SURF1-205ENST00000615505 IGHMBP2P38935 993 aaKnown RBP31.96■■■□□ 2.71
SURF1-205ENST00000615505 NIM1KQ8IY84 436 aa31.96■■■□□ 2.71
SURF1-205ENST00000615505 ANKIB1Q9P2G1 1089 aa31.96■■■□□ 2.71
SURF1-205ENST00000615505 ANKRD18BA2A2Z9 1011 aa31.95■■■□□ 2.71
SURF1-205ENST00000615505 C6orf229H3BNL8 230 aa31.95■■■□□ 2.71
SURF1-205ENST00000615505 BCAR3O75815 825 aa31.95■■■□□ 2.71
SURF1-205ENST00000615505 CHMP3Q9Y3E7 222 aa31.95■■■□□ 2.71
SURF1-205ENST00000615505 EIF6P56537 245 aaKnown RBP31.94■■■□□ 2.7
SURF1-205ENST00000615505 KIAA2012Q0VF49 1180 aa31.94■■■□□ 2.7
SURF1-205ENST00000615505 IFIT5Q13325 482 aaKnown RBP31.94■■■□□ 2.7
SURF1-205ENST00000615505 LMBR1LQ6UX01 489 aa31.94■■■□□ 2.7
SURF1-205ENST00000615505 PODXL2Q9NZ53 605 aa31.94■■■□□ 2.7
SURF1-205ENST00000615505 DDNO94850 711 aaPredicted RBP31.93■■■□□ 2.7
SURF1-205ENST00000615505 WASHC4Q2M389 1173 aa31.93■■■□□ 2.7
SURF1-205ENST00000615505 EPHA10Q5JZY3 1008 aa31.93■■■□□ 2.7
SURF1-205ENST00000615505 SUCLG2Q96I99 432 aa31.93■■■□□ 2.7
SURF1-205ENST00000615505 EYA3Q99504 573 aa31.93■■■□□ 2.7
SURF1-205ENST00000615505 MPHOSPH8Q99549 860 aa31.93■■■□□ 2.7
SURF1-205ENST00000615505 VEGFAP15692 232 aaPredicted RBP31.92■■■□□ 2.7
SURF1-205ENST00000615505 C16orf71Q8IYS4 520 aaPredicted RBP31.92■■■□□ 2.7
SURF1-205ENST00000615505 FRAT1Q92837 279 aaPredicted RBP31.92■■■□□ 2.7
SURF1-205ENST00000615505 USP44Q9H0E7 712 aa31.92■■■□□ 2.7
SURF1-205ENST00000615505 POLLQ9UGP5 575 aa31.92■■■□□ 2.7
SURF1-205ENST00000615505 TBC1D16Q8TBP0 767 aa31.91■■■□□ 2.7
SURF1-205ENST00000615505 GGA1Q9UJY5 639 aa31.91■■■□□ 2.7
SURF1-205ENST00000615505 XDHP47989 1333 aa31.91■■■□□ 2.7
SURF1-205ENST00000615505 ZNF541Q9H0D2 1346 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms