RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 KIAA2012Q0VF49 1180 aa14.77□□□□□ -0.05
HIF3A-217ENST00000600236 TRIM28Q13263 835 aaKnown RBP14.77□□□□□ -0.05
HIF3A-217ENST00000600236 USP50Q70EL3 339 aaPredicted RBP14.77□□□□□ -0.05
HIF3A-217ENST00000600236 FAM89AQ96GI7 184 aa14.77□□□□□ -0.05
HIF3A-217ENST00000600236 ELL2O00472 640 aaPredicted RBP14.76□□□□□ -0.05
HIF3A-217ENST00000600236 SCNN1DP51172 638 aa14.76□□□□□ -0.05
HIF3A-217ENST00000600236 SF3B3Q15393 1217 aaKnown RBP14.76□□□□□ -0.05
HIF3A-217ENST00000600236 CCDC30Q5VVM6 783 aa14.76□□□□□ -0.05
HIF3A-217ENST00000600236 MAP1SQ66K74 1059 aaPredicted RBP14.76□□□□□ -0.05
HIF3A-217ENST00000600236 CNTNAP1P78357 1384 aa14.75□□□□□ -0.05
HIF3A-217ENST00000600236 COL4A5P29400 1685 aa14.75□□□□□ -0.05
HIF3A-217ENST00000600236 IRS4O14654 1257 aaPredicted RBP14.75□□□□□ -0.05
HIF3A-217ENST00000600236 TNIP1Q15025 636 aa14.75□□□□□ -0.05
HIF3A-217ENST00000600236 CIAPIN1Q6FI81 312 aa14.75□□□□□ -0.05
HIF3A-217ENST00000600236 SLC51AQ86UW1 340 aa14.75□□□□□ -0.05
HIF3A-217ENST00000600236 ZBTB38Q8NAP3 1195 aaPredicted RBP14.75□□□□□ -0.05
HIF3A-217ENST00000600236 ZNF428Q96B54 188 aa14.75□□□□□ -0.05
HIF3A-217ENST00000600236 CEP350Q5VT06 3117 aa14.75□□□□□ -0.05
HIF3A-217ENST00000600236 CDHR2Q9BYE9 1310 aa14.74□□□□□ -0.05
HIF3A-217ENST00000600236 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
HIF3A-217ENST00000600236 EPS15P42566 896 aa14.74□□□□□ -0.05
HIF3A-217ENST00000600236 MYD88Q99836 296 aa14.74□□□□□ -0.05
HIF3A-217ENST00000600236 BCL2L13Q9BXK5 485 aa14.74□□□□□ -0.05
HIF3A-217ENST00000600236 PHAXQ9H814 394 aaKnown RBP14.74□□□□□ -0.05
HIF3A-217ENST00000600236 ADARB2Q9NS39 739 aaKnown RBP14.74□□□□□ -0.05
HIF3A-217ENST00000600236 CXCL9Q07325 125 aa14.73□□□□□ -0.05
HIF3A-217ENST00000600236 CCDC27Q2M243 656 aa14.73□□□□□ -0.05
HIF3A-217ENST00000600236 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
HIF3A-217ENST00000600236 C8orf58Q8NAV2 365 aa14.73□□□□□ -0.05
HIF3A-217ENST00000600236 CCDC191Q8NCU4 936 aa14.73□□□□□ -0.05
HIF3A-217ENST00000600236 CELF1Q92879 486 aaKnown RBP14.73□□□□□ -0.05
HIF3A-217ENST00000600236 EYA3Q99504 573 aa14.73□□□□□ -0.05
HIF3A-217ENST00000600236 STK31Q9BXU1 1019 aa14.73□□□□□ -0.05
HIF3A-217ENST00000600236 GPRC5DQ9NZD1 345 aa14.73□□□□□ -0.05
HIF3A-217ENST00000600236 NSFL1CQ9UNZ2 370 aaKnown RBP14.73□□□□□ -0.05
HIF3A-217ENST00000600236 ADAMTSL1Q8N6G6 1762 aa14.73□□□□□ -0.05
HIF3A-217ENST00000600236 WASHC4Q2M389 1173 aa14.72□□□□□ -0.05
HIF3A-217ENST00000600236 COL13A1Q5TAT6 717 aaPredicted RBP14.72□□□□□ -0.05
HIF3A-217ENST00000600236 CWC25Q9NXE8 425 aaPredicted RBP14.72□□□□□ -0.05
HIF3A-217ENST00000600236 ABT1Q9ULW3 272 aaKnown RBP14.72□□□□□ -0.05
HIF3A-217ENST00000600236 C6orf229H3BNL8 230 aa14.71□□□□□ -0.05
HIF3A-217ENST00000600236 ANP32CO43423 234 aa14.71□□□□□ -0.05
HIF3A-217ENST00000600236 PCCAP05165 728 aaPredicted RBP14.71□□□□□ -0.05
HIF3A-217ENST00000600236 GMPSP49915 693 aaPredicted RBP14.71□□□□□ -0.05
HIF3A-217ENST00000600236 RPS8P62241 208 aaKnown RBP14.71□□□□□ -0.05
HIF3A-217ENST00000600236 DEFB115Q30KQ5 88 aa14.71□□□□□ -0.05
HIF3A-217ENST00000600236 CCDC152Q4G0S7 254 aa14.71□□□□□ -0.05
HIF3A-217ENST00000600236 TNS4Q8IZW8 715 aa14.71□□□□□ -0.05
HIF3A-217ENST00000600236 AIDAQ96BJ3 306 aa14.71□□□□□ -0.05
HIF3A-217ENST00000600236 METTL22Q9BUU2 404 aaPredicted RBP14.71□□□□□ -0.05
HIF3A-217ENST00000600236 RASSF10A6NK89 507 aa14.7□□□□□ -0.06
HIF3A-217ENST00000600236 RAD17O75943 681 aa14.7□□□□□ -0.06
HIF3A-217ENST00000600236 NEXNQ0ZGT2 675 aa14.7□□□□□ -0.06
HIF3A-217ENST00000600236 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
HIF3A-217ENST00000600236 MRS2Q9HD23 443 aa14.7□□□□□ -0.06
HIF3A-217ENST00000600236 H7C1D1 291 aa14.69□□□□□ -0.06
HIF3A-217ENST00000600236 PDE8AO60658 829 aa14.69□□□□□ -0.06
HIF3A-217ENST00000600236 VEGFBP49765 207 aa14.69□□□□□ -0.06
HIF3A-217ENST00000600236 KSR2Q6VAB6 950 aa14.69□□□□□ -0.06
HIF3A-217ENST00000600236 WWC1Q8IX03 1113 aa14.69□□□□□ -0.06
HIF3A-217ENST00000600236 MAP3K2Q9Y2U5 619 aa14.69□□□□□ -0.06
HIF3A-217ENST00000600236 LAMB2P55268 1798 aa14.69□□□□□ -0.06
HIF3A-217ENST00000600236 LTBP1Q14766 1721 aa14.69□□□□□ -0.06
HIF3A-217ENST00000600236 IL16Q14005 1332 aa14.68□□□□□ -0.06
HIF3A-217ENST00000600236 G3V3G9 751 aa14.68□□□□□ -0.06
HIF3A-217ENST00000600236 RIMBP2O15034 1052 aa14.68□□□□□ -0.06
HIF3A-217ENST00000600236 GPSM2P81274 684 aa14.68□□□□□ -0.06
HIF3A-217ENST00000600236 TWISTNBQ3B726 338 aaPredicted RBP14.68□□□□□ -0.06
HIF3A-217ENST00000600236 DCAF8Q5TAQ9 597 aa14.68□□□□□ -0.06
HIF3A-217ENST00000600236 PAXIP1Q6ZW49 1069 aaPredicted RBP14.68□□□□□ -0.06
HIF3A-217ENST00000600236 ZC3H15Q8WU90 426 aaKnown RBP14.68□□□□□ -0.06
HIF3A-217ENST00000600236 TSR2Q969E8 191 aaKnown RBP14.68□□□□□ -0.06
HIF3A-217ENST00000600236 ZC3H12CQ9C0D7 883 aaKnown RBP14.68□□□□□ -0.06
HIF3A-217ENST00000600236 DDX60Q8IY21 1712 aaKnown RBP14.67□□□□□ -0.06
HIF3A-217ENST00000600236 ECE1P42892 770 aa14.67□□□□□ -0.06
HIF3A-217ENST00000600236 CCDC184Q52MB2 194 aa14.67□□□□□ -0.06
HIF3A-217ENST00000600236 TSPYL6Q8N831 410 aa14.67□□□□□ -0.06
HIF3A-217ENST00000600236 DPF2Q92785 391 aa14.67□□□□□ -0.06
HIF3A-217ENST00000600236 DBNDD1Q9H9R9 158 aa14.67□□□□□ -0.06
HIF3A-217ENST00000600236 PODXL2Q9NZ53 605 aa14.67□□□□□ -0.06
HIF3A-217ENST00000600236 ANKIB1Q9P2G1 1089 aa14.67□□□□□ -0.06
HIF3A-217ENST00000600236 POLLQ9UGP5 575 aa14.67□□□□□ -0.06
HIF3A-217ENST00000600236 CNOT7Q9UIV1 285 aaKnown RBP14.67□□□□□ -0.06
HIF3A-217ENST00000600236 DUOX1Q9NRD9 1551 aa14.67□□□□□ -0.06
HIF3A-217ENST00000600236 LRRC37AA6NMS7 1700 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 PI4KAP2A4QPH2 592 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 YDJCA8MPS7 323 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 ECE2O60344 883 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 RPS12P25398 132 aaKnown RBP14.66□□□□□ -0.06
HIF3A-217ENST00000600236 MAP2K1Q02750 393 aaPredicted RBP14.66□□□□□ -0.06
HIF3A-217ENST00000600236 ANKRD18AQ8IVF6 992 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 MICALL2Q8IY33 904 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 PI4KAP1Q8N8J0 262 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 TBC1D16Q8TBP0 767 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 CDC5LQ99459 802 aaKnown RBP14.66□□□□□ -0.06
HIF3A-217ENST00000600236 SEC31BQ9NQW1 1179 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 GGA1Q9UJY5 639 aa14.66□□□□□ -0.06
HIF3A-217ENST00000600236 WDR33Q9C0J8 1336 aaKnown RBP14.66□□□□□ -0.06
HIF3A-217ENST00000600236 PSMD14O00487 310 aa14.65□□□□□ -0.06
HIF3A-217ENST00000600236 UFL1O94874 794 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms