RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 NIM1KQ8IY84 436 aa20.41■□□□□ 0.86
SMG9-208ENST00000598886 CNTROBQ8N137 903 aa20.41■□□□□ 0.86
SMG9-208ENST00000598886 ZNF428Q96B54 188 aa20.41■□□□□ 0.86
SMG9-208ENST00000598886 HYPKQ9NX55 129 aa20.41■□□□□ 0.86
SMG9-208ENST00000598886 ATP5J2-PTCD1G3V325 749 aa20.4■□□□□ 0.86
SMG9-208ENST00000598886 CXCL9Q07325 125 aa20.4■□□□□ 0.86
SMG9-208ENST00000598886 PSME4Q14997 1843 aa20.4■□□□□ 0.86
SMG9-208ENST00000598886 SF3B3Q15393 1217 aaKnown RBP20.4■□□□□ 0.86
SMG9-208ENST00000598886 SCN9AQ15858 1988 aa20.39■□□□□ 0.86
SMG9-208ENST00000598886 CCDC184Q52MB2 194 aa20.39■□□□□ 0.85
SMG9-208ENST00000598886 DPP8Q6V1X1 898 aaPredicted RBP20.39■□□□□ 0.85
SMG9-208ENST00000598886 DDX46Q7L014 1031 aaKnown RBP20.39■□□□□ 0.85
SMG9-208ENST00000598886 FAM89AQ96GI7 184 aa20.39■□□□□ 0.85
SMG9-208ENST00000598886 GPRC5DQ9NZD1 345 aa20.39■□□□□ 0.85
SMG9-208ENST00000598886 ZNRF3Q9ULT6 936 aa20.39■□□□□ 0.85
SMG9-208ENST00000598886 MYH3P11055 1940 aa20.38■□□□□ 0.85
SMG9-208ENST00000598886 RASSF10A6NK89 507 aa20.38■□□□□ 0.85
SMG9-208ENST00000598886 MPNDQ8N594 471 aa20.38■□□□□ 0.85
SMG9-208ENST00000598886 SUPT20HQ8NEM7 779 aa20.38■□□□□ 0.85
SMG9-208ENST00000598886 CELF1Q92879 486 aaKnown RBP20.38■□□□□ 0.85
SMG9-208ENST00000598886 PHAXQ9H814 394 aaKnown RBP20.38■□□□□ 0.85
SMG9-208ENST00000598886 CLEC11AQ9Y240 323 aa20.38■□□□□ 0.85
SMG9-208ENST00000598886 ZNF646O15015 1829 aaPredicted RBP20.38■□□□□ 0.85
SMG9-208ENST00000598886 YDJCA8MPS7 323 aa20.37■□□□□ 0.85
SMG9-208ENST00000598886 VEGFBP49765 207 aa20.37■□□□□ 0.85
SMG9-208ENST00000598886 GNAI1P63096 354 aa20.37■□□□□ 0.85
SMG9-208ENST00000598886 FMR1Q06787 632 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMG9-208ENST00000598886 USP50Q70EL3 339 aaPredicted RBP20.37■□□□□ 0.85
SMG9-208ENST00000598886 TMC4Q7Z404 712 aa20.37■□□□□ 0.85
SMG9-208ENST00000598886 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
SMG9-208ENST00000598886 CDHR2Q9BYE9 1310 aa20.36■□□□□ 0.85
SMG9-208ENST00000598886 LMOD1P29536 600 aaPredicted RBP20.36■□□□□ 0.85
SMG9-208ENST00000598886 SPEF2Q9C093 1822 aa20.36■□□□□ 0.85
SMG9-208ENST00000598886 GMPSP49915 693 aaPredicted RBP20.34■□□□□ 0.85
SMG9-208ENST00000598886 ADARB2Q9NS39 739 aaKnown RBP20.34■□□□□ 0.85
SMG9-208ENST00000598886 PGAP2Q9UHJ9 254 aa20.34■□□□□ 0.85
SMG9-208ENST00000598886 IRS4O14654 1257 aaPredicted RBP20.33■□□□□ 0.85
SMG9-208ENST00000598886 FOXN1O15353 648 aa20.33■□□□□ 0.85
SMG9-208ENST00000598886 CALD1Q05682 793 aaKnown RBP20.33■□□□□ 0.85
SMG9-208ENST00000598886 CST9Q5W186 159 aa20.33■□□□□ 0.85
SMG9-208ENST00000598886 TSPYL6Q8N831 410 aa20.33■□□□□ 0.85
SMG9-208ENST00000598886 TMX4Q9H1E5 349 aaPredicted RBP20.33■□□□□ 0.85
SMG9-208ENST00000598886 TRAF5O00463 557 aa20.32■□□□□ 0.84
SMG9-208ENST00000598886 ELL2O00472 640 aaPredicted RBP20.32■□□□□ 0.84
SMG9-208ENST00000598886 RTL5Q5HYW3 569 aaPredicted RBP20.32■□□□□ 0.84
SMG9-208ENST00000598886 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
SMG9-208ENST00000598886 ZBTB38Q8NAP3 1195 aaPredicted RBP20.32■□□□□ 0.84
SMG9-208ENST00000598886 POLLQ9UGP5 575 aa20.32■□□□□ 0.84
SMG9-208ENST00000598886 SHTN1A0MZ66 631 aa20.31■□□□□ 0.84
SMG9-208ENST00000598886 RAD17O75943 681 aa20.31■□□□□ 0.84
SMG9-208ENST00000598886 HIRAP54198 1017 aaPredicted RBP20.31■□□□□ 0.84
SMG9-208ENST00000598886 GPSM2P81274 684 aa20.31■□□□□ 0.84
SMG9-208ENST00000598886 GOLGA2Q08379 1002 aa20.31■□□□□ 0.84
SMG9-208ENST00000598886 TNS4Q8IZW8 715 aa20.31■□□□□ 0.84
SMG9-208ENST00000598886 CACNA1FO60840 1977 aa20.31■□□□□ 0.84
SMG9-208ENST00000598886 RIC3Q7Z5B4 369 aa20.3■□□□□ 0.84
SMG9-208ENST00000598886 WBP1LQ9NX94 342 aa20.3■□□□□ 0.84
SMG9-208ENST00000598886 RTL9Q8NET4 1388 aa20.3■□□□□ 0.84
SMG9-208ENST00000598886 POLR2AP24928 1970 aaKnown RBP20.29■□□□□ 0.84
SMG9-208ENST00000598886 PCCAP05165 728 aaPredicted RBP20.29■□□□□ 0.84
SMG9-208ENST00000598886 CCDC27Q2M243 656 aa20.29■□□□□ 0.84
SMG9-208ENST00000598886 DEFB115Q30KQ5 88 aa20.29■□□□□ 0.84
SMG9-208ENST00000598886 CCDC191Q8NCU4 936 aa20.29■□□□□ 0.84
SMG9-208ENST00000598886 TRPM4Q8TD43 1214 aa20.29■□□□□ 0.84
SMG9-208ENST00000598886 MYD88Q99836 296 aa20.29■□□□□ 0.84
SMG9-208ENST00000598886 SEC31BQ9NQW1 1179 aa20.29■□□□□ 0.84
SMG9-208ENST00000598886 ZNF609O15014 1411 aa20.28■□□□□ 0.84
SMG9-208ENST00000598886 TNIP1Q15025 636 aa20.28■□□□□ 0.84
SMG9-208ENST00000598886 TSR2Q969E8 191 aaKnown RBP20.28■□□□□ 0.84
SMG9-208ENST00000598886 METTL22Q9BUU2 404 aaPredicted RBP20.28■□□□□ 0.84
SMG9-208ENST00000598886 WDR33Q9C0J8 1336 aaKnown RBP20.27■□□□□ 0.84
SMG9-208ENST00000598886 A0A1B0GUL6 1792 aa20.27■□□□□ 0.84
SMG9-208ENST00000598886 RPS8P62241 208 aaKnown RBP20.27■□□□□ 0.84
SMG9-208ENST00000598886 WASHC4Q2M389 1173 aa20.27■□□□□ 0.84
SMG9-208ENST00000598886 TBC1D16Q8TBP0 767 aa20.27■□□□□ 0.84
SMG9-208ENST00000598886 PODXL2Q9NZ53 605 aa20.27■□□□□ 0.84
SMG9-208ENST00000598886 NSFL1CQ9UNZ2 370 aaKnown RBP20.27■□□□□ 0.84
SMG9-208ENST00000598886 IGKV5-2P06315 115 aa20.26■□□□□ 0.83
SMG9-208ENST00000598886 CCDC30Q5VVM6 783 aa20.26■□□□□ 0.83
SMG9-208ENST00000598886 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
SMG9-208ENST00000598886 GPR101Q96P66 508 aaPredicted RBP20.26■□□□□ 0.83
SMG9-208ENST00000598886 DBNDD1Q9H9R9 158 aa20.26■□□□□ 0.83
SMG9-208ENST00000598886 KCNQ5Q9NR82 932 aa20.26■□□□□ 0.83
SMG9-208ENST00000598886 TLL2Q9Y6L7 1015 aa20.26■□□□□ 0.83
SMG9-208ENST00000598886 PSMD14O00487 310 aa20.25■□□□□ 0.83
SMG9-208ENST00000598886 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
SMG9-208ENST00000598886 ZC3H15Q8WU90 426 aaKnown RBP20.25■□□□□ 0.83
SMG9-208ENST00000598886 DPF2Q92785 391 aa20.25■□□□□ 0.83
SMG9-208ENST00000598886 JARID2Q92833 1246 aaPredicted RBP20.25■□□□□ 0.83
SMG9-208ENST00000598886 GLIS2Q9BZE0 524 aaPredicted RBP20.25■□□□□ 0.83
SMG9-208ENST00000598886 PRDM10Q9NQV6 1147 aa20.25■□□□□ 0.83
SMG9-208ENST00000598886 CWC25Q9NXE8 425 aaPredicted RBP20.25■□□□□ 0.83
SMG9-208ENST00000598886 CNOT7Q9UIV1 285 aaKnown RBP20.25■□□□□ 0.83
SMG9-208ENST00000598886 ABT1Q9ULW3 272 aaKnown RBP20.25■□□□□ 0.83
SMG9-208ENST00000598886 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
SMG9-208ENST00000598886 PDE8AO60658 829 aa20.24■□□□□ 0.83
SMG9-208ENST00000598886 EGFRP00533 1210 aa20.24■□□□□ 0.83
SMG9-208ENST00000598886 MICALL2Q8IY33 904 aa20.24■□□□□ 0.83
SMG9-208ENST00000598886 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
SMG9-208ENST00000598886 IL16Q14005 1332 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms