RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 ZNF428Q96B54 188 aa30.86■■■□□ 2.53
LSM7-205ENST00000589532 ATP5J2-PTCD1G3V325 749 aa30.85■■■□□ 2.53
LSM7-205ENST00000589532 GNAI1P63096 354 aa30.85■■■□□ 2.53
LSM7-205ENST00000589532 TRIM28Q13263 835 aaKnown RBP30.85■■■□□ 2.53
LSM7-205ENST00000589532 SUPT20HQ8NEM7 779 aa30.85■■■□□ 2.53
LSM7-205ENST00000589532 TMEM88BA6NKF7 163 aa30.84■■■□□ 2.53
LSM7-205ENST00000589532 EPS15P42566 896 aa30.84■■■□□ 2.53
LSM7-205ENST00000589532 KIAA2012Q0VF49 1180 aa30.84■■■□□ 2.53
LSM7-205ENST00000589532 DPP8Q6V1X1 898 aaPredicted RBP30.84■■■□□ 2.53
LSM7-205ENST00000589532 CNTROBQ8N137 903 aa30.84■■■□□ 2.53
LSM7-205ENST00000589532 FAM89AQ96GI7 184 aa30.84■■■□□ 2.53
LSM7-205ENST00000589532 CLEC11AQ9Y240 323 aa30.84■■■□□ 2.53
LSM7-205ENST00000589532 CALD1Q05682 793 aaKnown RBP30.83■■■□□ 2.53
LSM7-205ENST00000589532 SF3B3Q15393 1217 aaKnown RBP30.83■■■□□ 2.53
LSM7-205ENST00000589532 TMX4Q9H1E5 349 aaPredicted RBP30.83■■■□□ 2.53
LSM7-205ENST00000589532 LMOD1P29536 600 aaPredicted RBP30.82■■■□□ 2.52
LSM7-205ENST00000589532 TMC4Q7Z404 712 aa30.82■■■□□ 2.52
LSM7-205ENST00000589532 MPNDQ8N594 471 aa30.82■■■□□ 2.52
LSM7-205ENST00000589532 ZNRF3Q9ULT6 936 aa30.82■■■□□ 2.52
LSM7-205ENST00000589532 THSD7BQ9C0I4 1608 aa30.81■■■□□ 2.52
LSM7-205ENST00000589532 CXCL9Q07325 125 aa30.81■■■□□ 2.52
LSM7-205ENST00000589532 CCDC184Q52MB2 194 aa30.81■■■□□ 2.52
LSM7-205ENST00000589532 PHAXQ9H814 394 aaKnown RBP30.81■■■□□ 2.52
LSM7-205ENST00000589532 C8orf58Q8NAV2 365 aa30.8■■■□□ 2.52
LSM7-205ENST00000589532 CELF1Q92879 486 aaKnown RBP30.8■■■□□ 2.52
LSM7-205ENST00000589532 USP50Q70EL3 339 aaPredicted RBP30.79■■■□□ 2.52
LSM7-205ENST00000589532 GPRC5DQ9NZD1 345 aa30.79■■■□□ 2.52
LSM7-205ENST00000589532 CDHR2Q9BYE9 1310 aa30.78■■■□□ 2.52
LSM7-205ENST00000589532 RASSF10A6NK89 507 aa30.77■■■□□ 2.52
LSM7-205ENST00000589532 TRPM7Q96QT4 1865 aa30.77■■■□□ 2.52
LSM7-205ENST00000589532 ELL2O00472 640 aaPredicted RBP30.76■■■□□ 2.51
LSM7-205ENST00000589532 GOLGA2Q08379 1002 aa30.76■■■□□ 2.51
LSM7-205ENST00000589532 YDJCA8MPS7 323 aa30.75■■■□□ 2.51
LSM7-205ENST00000589532 IRS4O14654 1257 aaPredicted RBP30.75■■■□□ 2.51
LSM7-205ENST00000589532 VEGFBP49765 207 aa30.75■■■□□ 2.51
LSM7-205ENST00000589532 ADARB2Q9NS39 739 aaKnown RBP30.75■■■□□ 2.51
LSM7-205ENST00000589532 GMPSP49915 693 aaPredicted RBP30.74■■■□□ 2.51
LSM7-205ENST00000589532 RTL5Q5HYW3 569 aaPredicted RBP30.74■■■□□ 2.51
LSM7-205ENST00000589532 RIC3Q7Z5B4 369 aa30.74■■■□□ 2.51
LSM7-205ENST00000589532 ZBTB38Q8NAP3 1195 aaPredicted RBP30.74■■■□□ 2.51
LSM7-205ENST00000589532 CIAPIN1Q6FI81 312 aa30.73■■■□□ 2.51
LSM7-205ENST00000589532 FMR1Q06787 632 aaKnown RBP eCLIP30.72■■■□□ 2.51
LSM7-205ENST00000589532 CCDC27Q2M243 656 aa30.72■■■□□ 2.51
LSM7-205ENST00000589532 TSPYL6Q8N831 410 aa30.72■■■□□ 2.51
LSM7-205ENST00000589532 MYD88Q99836 296 aa30.71■■■□□ 2.51
LSM7-205ENST00000589532 RAD17O75943 681 aa30.7■■■□□ 2.51
LSM7-205ENST00000589532 CCDC191Q8NCU4 936 aa30.7■■■□□ 2.51
LSM7-205ENST00000589532 PCCAP05165 728 aaPredicted RBP30.69■■■□□ 2.5
LSM7-205ENST00000589532 GPSM2P81274 684 aa30.69■■■□□ 2.5
LSM7-205ENST00000589532 TSR2Q969E8 191 aaKnown RBP30.69■■■□□ 2.5
LSM7-205ENST00000589532 POLLQ9UGP5 575 aa30.69■■■□□ 2.5
LSM7-205ENST00000589532 SCN9AQ15858 1988 aa30.68■■■□□ 2.5
LSM7-205ENST00000589532 TRAF5O00463 557 aa30.68■■■□□ 2.5
LSM7-205ENST00000589532 CCDC30Q5VVM6 783 aa30.68■■■□□ 2.5
LSM7-205ENST00000589532 TNS4Q8IZW8 715 aa30.68■■■□□ 2.5
LSM7-205ENST00000589532 METTL22Q9BUU2 404 aaPredicted RBP30.68■■■□□ 2.5
LSM7-205ENST00000589532 PGAP2Q9UHJ9 254 aa30.68■■■□□ 2.5
LSM7-205ENST00000589532 FOXN1O15353 648 aa30.67■■■□□ 2.5
LSM7-205ENST00000589532 TNIP1Q15025 636 aa30.67■■■□□ 2.5
LSM7-205ENST00000589532 NSFL1CQ9UNZ2 370 aaKnown RBP30.67■■■□□ 2.5
LSM7-205ENST00000589532 HIRAP54198 1017 aaPredicted RBP30.66■■■□□ 2.5
LSM7-205ENST00000589532 SEC31BQ9NQW1 1179 aa30.66■■■□□ 2.5
LSM7-205ENST00000589532 RPS8P62241 208 aaKnown RBP30.65■■■□□ 2.5
LSM7-205ENST00000589532 WASHC4Q2M389 1173 aa30.65■■■□□ 2.5
LSM7-205ENST00000589532 DEFB115Q30KQ5 88 aa30.65■■■□□ 2.5
LSM7-205ENST00000589532 CST9Q5W186 159 aa30.65■■■□□ 2.5
LSM7-205ENST00000589532 WWC1Q8IX03 1113 aa30.65■■■□□ 2.5
LSM7-205ENST00000589532 TRPM4Q8TD43 1214 aa30.65■■■□□ 2.5
LSM7-205ENST00000589532 CWC25Q9NXE8 425 aaPredicted RBP30.65■■■□□ 2.5
LSM7-205ENST00000589532 PODXL2Q9NZ53 605 aa30.65■■■□□ 2.5
LSM7-205ENST00000589532 MYH3P11055 1940 aa30.65■■■□□ 2.5
LSM7-205ENST00000589532 RTL9Q8NET4 1388 aa30.65■■■□□ 2.5
LSM7-205ENST00000589532 SHTN1A0MZ66 631 aa30.64■■■□□ 2.5
LSM7-205ENST00000589532 NCBP3Q53F19 620 aaKnown RBP30.64■■■□□ 2.5
LSM7-205ENST00000589532 TBC1D16Q8TBP0 767 aa30.64■■■□□ 2.5
LSM7-205ENST00000589532 WBP1LQ9NX94 342 aa30.64■■■□□ 2.5
LSM7-205ENST00000589532 PSME4Q14997 1843 aa30.63■■■□□ 2.49
LSM7-205ENST00000589532 IGKV5-2P06315 115 aa30.63■■■□□ 2.49
LSM7-205ENST00000589532 CHMP4AQ9BY43 222 aa30.63■■■□□ 2.49
LSM7-205ENST00000589532 DBNDD1Q9H9R9 158 aa30.63■■■□□ 2.49
LSM7-205ENST00000589532 ABT1Q9ULW3 272 aaKnown RBP30.63■■■□□ 2.49
LSM7-205ENST00000589532 DDX58O95786 925 aaKnown RBP30.62■■■□□ 2.49
LSM7-205ENST00000589532 GPR101Q96P66 508 aaPredicted RBP30.62■■■□□ 2.49
LSM7-205ENST00000589532 BCL2L13Q9BXK5 485 aa30.62■■■□□ 2.49
LSM7-205ENST00000589532 MAP3K2Q9Y2U5 619 aa30.62■■■□□ 2.49
LSM7-205ENST00000589532 IL16Q14005 1332 aa30.62■■■□□ 2.49
LSM7-205ENST00000589532 WDR33Q9C0J8 1336 aaKnown RBP30.62■■■□□ 2.49
LSM7-205ENST00000589532 PSMD14O00487 310 aa30.61■■■□□ 2.49
LSM7-205ENST00000589532 PDE8AO60658 829 aa30.61■■■□□ 2.49
LSM7-205ENST00000589532 HSP90B1P14625 803 aaKnown RBP30.61■■■□□ 2.49
LSM7-205ENST00000589532 ZC3H15Q8WU90 426 aaKnown RBP30.61■■■□□ 2.49
LSM7-205ENST00000589532 C6orf229H3BNL8 230 aa30.6■■■□□ 2.49
LSM7-205ENST00000589532 ZNF609O15014 1411 aa30.6■■■□□ 2.49
LSM7-205ENST00000589532 ECE2O60344 883 aa30.6■■■□□ 2.49
LSM7-205ENST00000589532 KSR2Q6VAB6 950 aa30.6■■■□□ 2.49
LSM7-205ENST00000589532 DPF2Q92785 391 aa30.6■■■□□ 2.49
LSM7-205ENST00000589532 JARID2Q92833 1246 aaPredicted RBP30.6■■■□□ 2.49
LSM7-205ENST00000589532 CNOT7Q9UIV1 285 aaKnown RBP30.6■■■□□ 2.49
LSM7-205ENST00000589532 ZBTB12Q9Y330 459 aaPredicted RBP30.6■■■□□ 2.49
LSM7-205ENST00000589532 TLL2Q9Y6L7 1015 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms