RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 ISCA1Q9BUE6 129 aa22■■□□□ 1.11
MBD3-204ENST00000585967 RTFDC1Q9BY42 306 aaPredicted RBP22■■□□□ 1.11
MBD3-204ENST00000585967 LTBP1Q14766 1721 aa22■■□□□ 1.11
MBD3-204ENST00000585967 TMEM88BA6NKF7 163 aa21.99■■□□□ 1.11
MBD3-204ENST00000585967 AOC3Q16853 763 aa21.99■■□□□ 1.11
MBD3-204ENST00000585967 ZNRF3Q9ULT6 936 aa21.99■■□□□ 1.11
MBD3-204ENST00000585967 CDHR2Q9BYE9 1310 aa21.99■■□□□ 1.11
MBD3-204ENST00000585967 TRIM28Q13263 835 aaKnown RBP21.98■■□□□ 1.11
MBD3-204ENST00000585967 CCDC30Q5VVM6 783 aa21.98■■□□□ 1.11
MBD3-204ENST00000585967 USP50Q70EL3 339 aaPredicted RBP21.98■■□□□ 1.11
MBD3-204ENST00000585967 ATP5J2-PTCD1G3V325 749 aa21.97■■□□□ 1.11
MBD3-204ENST00000585967 FAM89AQ96GI7 184 aa21.97■■□□□ 1.11
MBD3-204ENST00000585967 CNTNAP1P78357 1384 aa21.97■■□□□ 1.11
MBD3-204ENST00000585967 KIAA2012Q0VF49 1180 aa21.96■■□□□ 1.11
MBD3-204ENST00000585967 TNIP1Q15025 636 aa21.96■■□□□ 1.11
MBD3-204ENST00000585967 SF3B3Q15393 1217 aaKnown RBP21.96■■□□□ 1.11
MBD3-204ENST00000585967 CNTROBQ8N137 903 aa21.96■■□□□ 1.11
MBD3-204ENST00000585967 MKRN1Q9UHC7 482 aaKnown RBP21.96■■□□□ 1.11
MBD3-204ENST00000585967 IRS4O14654 1257 aaPredicted RBP21.95■■□□□ 1.1
MBD3-204ENST00000585967 HSPA1AP0DMV8 641 aaKnown RBP21.95■■□□□ 1.1
MBD3-204ENST00000585967 HSPA1BP0DMV9 641 aaKnown RBP21.95■■□□□ 1.1
MBD3-204ENST00000585967 SCNN1DP51172 638 aa21.95■■□□□ 1.1
MBD3-204ENST00000585967 STK31Q9BXU1 1019 aa21.95■■□□□ 1.1
MBD3-204ENST00000585967 DUOX1Q9NRD9 1551 aa21.95■■□□□ 1.1
MBD3-204ENST00000585967 ELL2O00472 640 aaPredicted RBP21.94■■□□□ 1.1
MBD3-204ENST00000585967 ITGBL1O95965 494 aaPredicted RBP21.94■■□□□ 1.1
MBD3-204ENST00000585967 CCDC27Q2M243 656 aa21.94■■□□□ 1.1
MBD3-204ENST00000585967 CIAPIN1Q6FI81 312 aa21.94■■□□□ 1.1
MBD3-204ENST00000585967 ZBTB38Q8NAP3 1195 aaPredicted RBP21.94■■□□□ 1.1
MBD3-204ENST00000585967 CCDC191Q8NCU4 936 aa21.94■■□□□ 1.1
MBD3-204ENST00000585967 ADARB2Q9NS39 739 aaKnown RBP21.94■■□□□ 1.1
MBD3-204ENST00000585967 MAP1SQ66K74 1059 aaPredicted RBP21.93■■□□□ 1.1
MBD3-204ENST00000585967 EYA3Q99504 573 aa21.93■■□□□ 1.1
MBD3-204ENST00000585967 BCL2L13Q9BXK5 485 aa21.93■■□□□ 1.1
MBD3-204ENST00000585967 GPRC5DQ9NZD1 345 aa21.93■■□□□ 1.1
MBD3-204ENST00000585967 SPEF2Q9C093 1822 aa21.92■■□□□ 1.1
MBD3-204ENST00000585967 ANP32CO43423 234 aa21.92■■□□□ 1.1
MBD3-204ENST00000585967 MYD88Q99836 296 aa21.92■■□□□ 1.1
MBD3-204ENST00000585967 CWC25Q9NXE8 425 aaPredicted RBP21.92■■□□□ 1.1
MBD3-204ENST00000585967 EPS15P42566 896 aa21.91■■□□□ 1.1
MBD3-204ENST00000585967 CXCL9Q07325 125 aa21.91■■□□□ 1.1
MBD3-204ENST00000585967 NEXNQ0ZGT2 675 aa21.91■■□□□ 1.1
MBD3-204ENST00000585967 CCDC152Q4G0S7 254 aa21.91■■□□□ 1.1
MBD3-204ENST00000585967 RTL5Q5HYW3 569 aaPredicted RBP21.91■■□□□ 1.1
MBD3-204ENST00000585967 PHAXQ9H814 394 aaKnown RBP21.91■■□□□ 1.1
MBD3-204ENST00000585967 NSFL1CQ9UNZ2 370 aaKnown RBP21.91■■□□□ 1.1
MBD3-204ENST00000585967 PSME4Q14997 1843 aa21.91■■□□□ 1.1
MBD3-204ENST00000585967 WASHC4Q2M389 1173 aa21.9■■□□□ 1.1
MBD3-204ENST00000585967 NCBP3Q53F19 620 aaKnown RBP21.9■■□□□ 1.1
MBD3-204ENST00000585967 C8orf58Q8NAV2 365 aa21.9■■□□□ 1.1
MBD3-204ENST00000585967 AIDAQ96BJ3 306 aa21.9■■□□□ 1.1
MBD3-204ENST00000585967 ABT1Q9ULW3 272 aaKnown RBP21.9■■□□□ 1.1
MBD3-204ENST00000585967 IL16Q14005 1332 aa21.89■■□□□ 1.1
MBD3-204ENST00000585967 C6orf229H3BNL8 230 aa21.89■■□□□ 1.09
MBD3-204ENST00000585967 PCCAP05165 728 aaPredicted RBP21.89■■□□□ 1.09
MBD3-204ENST00000585967 CELF1Q92879 486 aaKnown RBP21.89■■□□□ 1.09
MBD3-204ENST00000585967 ZNF428Q96B54 188 aa21.89■■□□□ 1.09
MBD3-204ENST00000585967 METTL22Q9BUU2 404 aaPredicted RBP21.89■■□□□ 1.09
MBD3-204ENST00000585967 MRS2Q9HD23 443 aa21.89■■□□□ 1.09
MBD3-204ENST00000585967 PDE8AO60658 829 aa21.88■■□□□ 1.09
MBD3-204ENST00000585967 GMPSP49915 693 aaPredicted RBP21.88■■□□□ 1.09
MBD3-204ENST00000585967 RPS8P62241 208 aaKnown RBP21.88■■□□□ 1.09
MBD3-204ENST00000585967 SLC51AQ86UW1 340 aa21.88■■□□□ 1.09
MBD3-204ENST00000585967 RASSF10A6NK89 507 aa21.87■■□□□ 1.09
MBD3-204ENST00000585967 RAD17O75943 681 aa21.87■■□□□ 1.09
MBD3-204ENST00000585967 DEFB115Q30KQ5 88 aa21.87■■□□□ 1.09
MBD3-204ENST00000585967 G3V3G9 751 aa21.86■■□□□ 1.09
MBD3-204ENST00000585967 H7C1D1 291 aa21.86■■□□□ 1.09
MBD3-204ENST00000585967 TWISTNBQ3B726 338 aaPredicted RBP21.86■■□□□ 1.09
MBD3-204ENST00000585967 DCAF8Q5TAQ9 597 aa21.86■■□□□ 1.09
MBD3-204ENST00000585967 KSR2Q6VAB6 950 aa21.86■■□□□ 1.09
MBD3-204ENST00000585967 WWC1Q8IX03 1113 aa21.86■■□□□ 1.09
MBD3-204ENST00000585967 TNS4Q8IZW8 715 aa21.86■■□□□ 1.09
MBD3-204ENST00000585967 ZC3H15Q8WU90 426 aaKnown RBP21.86■■□□□ 1.09
MBD3-204ENST00000585967 MAP3K2Q9Y2U5 619 aa21.86■■□□□ 1.09
MBD3-204ENST00000585967 THSD7BQ9C0I4 1608 aa21.85■■□□□ 1.09
MBD3-204ENST00000585967 ECE1P42892 770 aa21.85■■□□□ 1.09
MBD3-204ENST00000585967 COL13A1Q5TAT6 717 aaPredicted RBP21.85■■□□□ 1.09
MBD3-204ENST00000585967 TSR2Q969E8 191 aaKnown RBP21.85■■□□□ 1.09
MBD3-204ENST00000585967 ANKIB1Q9P2G1 1089 aa21.85■■□□□ 1.09
MBD3-204ENST00000585967 RPS12P25398 132 aaKnown RBP21.84■■□□□ 1.09
MBD3-204ENST00000585967 CDC5LQ99459 802 aaKnown RBP21.84■■□□□ 1.09
MBD3-204ENST00000585967 ZC3H12CQ9C0D7 883 aaKnown RBP21.84■■□□□ 1.09
MBD3-204ENST00000585967 POLR2AP24928 1970 aaKnown RBP21.84■■□□□ 1.09
MBD3-204ENST00000585967 ZNF316A6NFI3 1004 aaPredicted RBP21.83■■□□□ 1.09
MBD3-204ENST00000585967 VEGFBP49765 207 aa21.83■■□□□ 1.09
MBD3-204ENST00000585967 ANKRD18AQ8IVF6 992 aa21.83■■□□□ 1.09
MBD3-204ENST00000585967 DPF2Q92785 391 aa21.83■■□□□ 1.09
MBD3-204ENST00000585967 PODXL2Q9NZ53 605 aa21.83■■□□□ 1.09
MBD3-204ENST00000585967 SCN9AQ15858 1988 aa21.83■■□□□ 1.08
MBD3-204ENST00000585967 PI4KAP2A4QPH2 592 aa21.82■■□□□ 1.08
MBD3-204ENST00000585967 GPSM2P81274 684 aa21.82■■□□□ 1.08
MBD3-204ENST00000585967 PAXIP1Q6ZW49 1069 aaPredicted RBP21.82■■□□□ 1.08
MBD3-204ENST00000585967 PI4KAP1Q8N8J0 262 aa21.82■■□□□ 1.08
MBD3-204ENST00000585967 DBNDD1Q9H9R9 158 aa21.82■■□□□ 1.08
MBD3-204ENST00000585967 CNOT7Q9UIV1 285 aaKnown RBP21.82■■□□□ 1.08
MBD3-204ENST00000585967 GGA1Q9UJY5 639 aa21.82■■□□□ 1.08
MBD3-204ENST00000585967 RIMBP2O15034 1052 aa21.81■■□□□ 1.08
MBD3-204ENST00000585967 ECE2O60344 883 aa21.81■■□□□ 1.08
MBD3-204ENST00000585967 UFL1O94874 794 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms