RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
LITAF-216ENST00000574848 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
LITAF-216ENST00000574848 DDX46Q7L014 1031 aaKnown RBP13.58□□□□□ -0.24
LITAF-216ENST00000574848 SP8Q8IXZ3 490 aa13.58□□□□□ -0.24
LITAF-216ENST00000574848 ZBTB38Q8NAP3 1195 aaPredicted RBP13.58□□□□□ -0.24
LITAF-216ENST00000574848 METTL22Q9BUU2 404 aaPredicted RBP13.58□□□□□ -0.24
LITAF-216ENST00000574848 MYH3P11055 1940 aa13.57□□□□□ -0.24
LITAF-216ENST00000574848 PCCAP05165 728 aaPredicted RBP13.57□□□□□ -0.24
LITAF-216ENST00000574848 GPC2Q8N158 579 aa13.57□□□□□ -0.24
LITAF-216ENST00000574848 SUPT20HQ8NEM7 779 aa13.57□□□□□ -0.24
LITAF-216ENST00000574848 JDP2Q8WYK2 163 aa13.57□□□□□ -0.24
LITAF-216ENST00000574848 MYD88Q99836 296 aa13.57□□□□□ -0.24
LITAF-216ENST00000574848 STK31Q9BXU1 1019 aa13.57□□□□□ -0.24
LITAF-216ENST00000574848 ZNF521Q96K83 1311 aa13.57□□□□□ -0.24
LITAF-216ENST00000574848 IRS4O14654 1257 aaPredicted RBP13.56□□□□□ -0.24
LITAF-216ENST00000574848 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
LITAF-216ENST00000574848 KSR2Q6VAB6 950 aa13.56□□□□□ -0.24
LITAF-216ENST00000574848 TMX4Q9H1E5 349 aaPredicted RBP13.56□□□□□ -0.24
LITAF-216ENST00000574848 TAF1DQ9H5J8 278 aaPredicted RBP13.56□□□□□ -0.24
LITAF-216ENST00000574848 CWC25Q9NXE8 425 aaPredicted RBP13.56□□□□□ -0.24
LITAF-216ENST00000574848 CDHR2Q9BYE9 1310 aa13.56□□□□□ -0.24
LITAF-216ENST00000574848 IGKV5-2P06315 115 aa13.55□□□□□ -0.24
LITAF-216ENST00000574848 LARGE2Q8N3Y3 721 aa13.55□□□□□ -0.24
LITAF-216ENST00000574848 DNAJC5GQ8N7S2 189 aa13.55□□□□□ -0.24
LITAF-216ENST00000574848 MAP3K2Q9Y2U5 619 aa13.55□□□□□ -0.24
LITAF-216ENST00000574848 PI4KAP2A4QPH2 592 aa13.54□□□□□ -0.24
LITAF-216ENST00000574848 TCERG1O14776 1098 aaKnown RBP13.54□□□□□ -0.24
LITAF-216ENST00000574848 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
LITAF-216ENST00000574848 EIF6P56537 245 aaKnown RBP13.54□□□□□ -0.24
LITAF-216ENST00000574848 KIAA2012Q0VF49 1180 aa13.54□□□□□ -0.24
LITAF-216ENST00000574848 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
LITAF-216ENST00000574848 DPP8Q6V1X1 898 aaPredicted RBP13.54□□□□□ -0.24
LITAF-216ENST00000574848 LDHDQ86WU2 507 aa13.54□□□□□ -0.24
LITAF-216ENST00000574848 NIM1KQ8IY84 436 aa13.54□□□□□ -0.24
LITAF-216ENST00000574848 MPNDQ8N594 471 aa13.54□□□□□ -0.24
LITAF-216ENST00000574848 PI4KAP1Q8N8J0 262 aa13.54□□□□□ -0.24
LITAF-216ENST00000574848 CELF1Q92879 486 aaKnown RBP13.54□□□□□ -0.24
LITAF-216ENST00000574848 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
LITAF-216ENST00000574848 HACL1Q9UJ83 578 aa13.54□□□□□ -0.24
LITAF-216ENST00000574848 PDE8AO60658 829 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 VAMP4O75379 141 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 FLIIQ13045 1269 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 AOC3Q16853 763 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 G2E3Q7L622 706 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 ZNF428Q96B54 188 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 MYH16Q9H6N6 1097 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 RTL9Q8NET4 1388 aa13.53□□□□□ -0.24
LITAF-216ENST00000574848 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.25
LITAF-216ENST00000574848 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
LITAF-216ENST00000574848 EPHX2P34913 555 aa13.52□□□□□ -0.25
LITAF-216ENST00000574848 SCNN1DP51172 638 aa13.52□□□□□ -0.25
LITAF-216ENST00000574848 EXOSC9Q06265 439 aaKnown RBP13.52□□□□□ -0.25
LITAF-216ENST00000574848 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.25
LITAF-216ENST00000574848 RTL5Q5HYW3 569 aaPredicted RBP13.52□□□□□ -0.25
LITAF-216ENST00000574848 PASKQ96RG2 1323 aa13.51□□□□□ -0.25
LITAF-216ENST00000574848 CCDC152Q4G0S7 254 aa13.51□□□□□ -0.25
LITAF-216ENST00000574848 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
LITAF-216ENST00000574848 KLRG1Q96E93 195 aa13.51□□□□□ -0.25
LITAF-216ENST00000574848 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
LITAF-216ENST00000574848 ZNRF3Q9ULT6 936 aa13.51□□□□□ -0.25
LITAF-216ENST00000574848 CTSWP56202 376 aa13.5□□□□□ -0.25
LITAF-216ENST00000574848 RPS8P62241 208 aaKnown RBP13.5□□□□□ -0.25
LITAF-216ENST00000574848 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
LITAF-216ENST00000574848 SALL2Q9Y467 1007 aaPredicted RBP13.5□□□□□ -0.25
LITAF-216ENST00000574848 PSME4Q14997 1843 aa13.5□□□□□ -0.25
LITAF-216ENST00000574848 SPEF2Q9C093 1822 aa13.5□□□□□ -0.25
LITAF-216ENST00000574848 H7C1W4 665 aa13.49□□□□□ -0.25
LITAF-216ENST00000574848 CASP7P55210 303 aa13.49□□□□□ -0.25
LITAF-216ENST00000574848 HTRA3P83110 453 aa13.49□□□□□ -0.25
LITAF-216ENST00000574848 CXCL9Q07325 125 aa13.49□□□□□ -0.25
LITAF-216ENST00000574848 FKBP5Q13451 457 aaPredicted RBP13.49□□□□□ -0.25
LITAF-216ENST00000574848 CWF19L2Q2TBE0 894 aaKnown RBP13.49□□□□□ -0.25
LITAF-216ENST00000574848 LINS1Q8NG48 757 aa13.49□□□□□ -0.25
LITAF-216ENST00000574848 DNAAF4Q8WXU2 420 aa13.49□□□□□ -0.25
LITAF-216ENST00000574848 PLA2G12BQ9BX93 195 aa13.49□□□□□ -0.25
LITAF-216ENST00000574848 SEC31BQ9NQW1 1179 aa13.49□□□□□ -0.25
LITAF-216ENST00000574848 ZNF609O15014 1411 aa13.48□□□□□ -0.25
LITAF-216ENST00000574848 ITGBL1O95965 494 aaPredicted RBP13.48□□□□□ -0.25
LITAF-216ENST00000574848 LMOD1P29536 600 aaPredicted RBP13.48□□□□□ -0.25
LITAF-216ENST00000574848 GPSM2P81274 684 aa13.48□□□□□ -0.25
LITAF-216ENST00000574848 GCKRQ14397 625 aa13.48□□□□□ -0.25
LITAF-216ENST00000574848 ERICH6BQ5W0A0 696 aa13.48□□□□□ -0.25
LITAF-216ENST00000574848 POLLQ9UGP5 575 aa13.48□□□□□ -0.25
LITAF-216ENST00000574848 SUPT16HQ9Y5B9 1047 aaKnown RBP13.48□□□□□ -0.25
LITAF-216ENST00000574848 GJA3Q9Y6H8 435 aa13.48□□□□□ -0.25
LITAF-216ENST00000574848 YDJCA8MPS7 323 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 WASHC4Q2M389 1173 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 CIAPIN1Q6FI81 312 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 USP50Q70EL3 339 aaPredicted RBP13.47□□□□□ -0.25
LITAF-216ENST00000574848 TTLL11Q8NHH1 800 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 TBC1D16Q8TBP0 767 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 EYA3Q99504 573 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 NSFL1CQ9UNZ2 370 aaKnown RBP13.47□□□□□ -0.25
LITAF-216ENST00000574848 A0A1B0GUL6 1792 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 SCN9AQ15858 1988 aa13.47□□□□□ -0.25
LITAF-216ENST00000574848 ZNF646O15015 1829 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms