RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 TMX4Q9H1E5 349 aaPredicted RBP28.7■■■□□ 2.18
SNF8-216ENST00000573795 ZNRF3Q9ULT6 936 aa28.7■■■□□ 2.18
SNF8-216ENST00000573795 THSD7BQ9C0I4 1608 aa28.69■■■□□ 2.18
SNF8-216ENST00000573795 DEFB115Q30KQ5 88 aa28.69■■■□□ 2.18
SNF8-216ENST00000573795 DPP8Q6V1X1 898 aaPredicted RBP28.69■■■□□ 2.18
SNF8-216ENST00000573795 PLBD2Q8NHP8 589 aa28.69■■■□□ 2.18
SNF8-216ENST00000573795 ISCA1Q9BUE6 129 aa28.69■■■□□ 2.18
SNF8-216ENST00000573795 GPRC5DQ9NZD1 345 aa28.69■■■□□ 2.18
SNF8-216ENST00000573795 KIAA2012Q0VF49 1180 aa28.68■■■□□ 2.18
SNF8-216ENST00000573795 DDX46Q7L014 1031 aaKnown RBP28.68■■■□□ 2.18
SNF8-216ENST00000573795 MPNDQ8N594 471 aa28.68■■■□□ 2.18
SNF8-216ENST00000573795 WBP1LQ9NX94 342 aa28.68■■■□□ 2.18
SNF8-216ENST00000573795 CFAP44Q96MT7 982 aa28.66■■■□□ 2.18
SNF8-216ENST00000573795 ADARB2Q9NS39 739 aaKnown RBP28.66■■■□□ 2.18
SNF8-216ENST00000573795 DBF4Q9UBU7 674 aaPredicted RBP28.66■■■□□ 2.18
SNF8-216ENST00000573795 TRAF5O00463 557 aa28.65■■■□□ 2.18
SNF8-216ENST00000573795 GMPSP49915 693 aaPredicted RBP28.65■■■□□ 2.18
SNF8-216ENST00000573795 ANKRD13DQ6ZTN6 518 aa28.65■■■□□ 2.18
SNF8-216ENST00000573795 ABT1Q9ULW3 272 aaKnown RBP28.65■■■□□ 2.18
SNF8-216ENST00000573795 DUSP27Q5VZP5 1158 aa28.64■■■□□ 2.18
SNF8-216ENST00000573795 FAM89AQ96GI7 184 aa28.64■■■□□ 2.18
SNF8-216ENST00000573795 PRDM10Q9NQV6 1147 aa28.64■■■□□ 2.18
SNF8-216ENST00000573795 MBIPQ9NS73 344 aa28.64■■■□□ 2.18
SNF8-216ENST00000573795 WDR33Q9C0J8 1336 aaKnown RBP28.64■■■□□ 2.17
SNF8-216ENST00000573795 YDJCA8MPS7 323 aa28.63■■■□□ 2.17
SNF8-216ENST00000573795 ATP5J2-PTCD1G3V325 749 aa28.63■■■□□ 2.17
SNF8-216ENST00000573795 ZNF853P0CG23 659 aa28.63■■■□□ 2.17
SNF8-216ENST00000573795 CST9Q5W186 159 aa28.63■■■□□ 2.17
SNF8-216ENST00000573795 PRKRIP1Q9H875 184 aaPredicted RBP28.63■■■□□ 2.17
SNF8-216ENST00000573795 CTCFP49711 727 aaPredicted RBP28.62■■■□□ 2.17
SNF8-216ENST00000573795 CIAPIN1Q6FI81 312 aa28.62■■■□□ 2.17
SNF8-216ENST00000573795 AIDAQ96BJ3 306 aa28.62■■■□□ 2.17
SNF8-216ENST00000573795 RAD17O75943 681 aa28.61■■■□□ 2.17
SNF8-216ENST00000573795 SF3B3Q15393 1217 aaKnown RBP28.61■■■□□ 2.17
SNF8-216ENST00000573795 TMC4Q7Z404 712 aa28.61■■■□□ 2.17
SNF8-216ENST00000573795 CELF1Q92879 486 aaKnown RBP28.61■■■□□ 2.17
SNF8-216ENST00000573795 HYPKQ9NX55 129 aa28.61■■■□□ 2.17
SNF8-216ENST00000573795 CDHR2Q9BYE9 1310 aa28.61■■■□□ 2.17
SNF8-216ENST00000573795 HIRAP54198 1017 aaPredicted RBP28.58■■■□□ 2.17
SNF8-216ENST00000573795 TRIM28Q13263 835 aaKnown RBP28.58■■■□□ 2.17
SNF8-216ENST00000573795 PGAP2Q9UHJ9 254 aa28.58■■■□□ 2.17
SNF8-216ENST00000573795 SHTN1A0MZ66 631 aa28.57■■■□□ 2.16
SNF8-216ENST00000573795 HSPA8P11142 646 aaKnown RBP28.57■■■□□ 2.16
SNF8-216ENST00000573795 LBX1P52954 281 aa28.57■■■□□ 2.16
SNF8-216ENST00000573795 RTL5Q5HYW3 569 aaPredicted RBP28.57■■■□□ 2.16
SNF8-216ENST00000573795 TRPM4Q8TD43 1214 aa28.57■■■□□ 2.16
SNF8-216ENST00000573795 TLL2Q9Y6L7 1015 aa28.57■■■□□ 2.16
SNF8-216ENST00000573795 TNIP1Q15025 636 aa28.56■■■□□ 2.16
SNF8-216ENST00000573795 CYP4F22Q6NT55 531 aa28.56■■■□□ 2.16
SNF8-216ENST00000573795 CAPNS2Q96L46 248 aa28.56■■■□□ 2.16
SNF8-216ENST00000573795 APAF1O14727 1248 aa28.55■■■□□ 2.16
SNF8-216ENST00000573795 BCL2L13Q9BXK5 485 aa28.55■■■□□ 2.16
SNF8-216ENST00000573795 GLIS2Q9BZE0 524 aaPredicted RBP28.55■■■□□ 2.16
SNF8-216ENST00000573795 PHAXQ9H814 394 aaKnown RBP28.55■■■□□ 2.16
SNF8-216ENST00000573795 IFT57Q9NWB7 429 aa28.55■■■□□ 2.16
SNF8-216ENST00000573795 IRS4O14654 1257 aaPredicted RBP28.54■■■□□ 2.16
SNF8-216ENST00000573795 GPSM2P81274 684 aa28.54■■■□□ 2.16
SNF8-216ENST00000573795 MAP2K1Q02750 393 aaPredicted RBP28.54■■■□□ 2.16
SNF8-216ENST00000573795 POLLQ9UGP5 575 aa28.54■■■□□ 2.16
SNF8-216ENST00000573795 NSFL1CQ9UNZ2 370 aaKnown RBP28.53■■■□□ 2.16
SNF8-216ENST00000573795 WASHC4Q2M389 1173 aa28.52■■■□□ 2.16
SNF8-216ENST00000573795 DBNDD1Q9H9R9 158 aa28.52■■■□□ 2.16
SNF8-216ENST00000573795 CNOT7Q9UIV1 285 aaKnown RBP28.52■■■□□ 2.16
SNF8-216ENST00000573795 ZBTB12Q9Y330 459 aaPredicted RBP28.52■■■□□ 2.16
SNF8-216ENST00000573795 SCN9AQ15858 1988 aa28.51■■■□□ 2.16
SNF8-216ENST00000573795 ELL2O00472 640 aaPredicted RBP28.51■■■□□ 2.15
SNF8-216ENST00000573795 PAXIP1Q6ZW49 1069 aaPredicted RBP28.51■■■□□ 2.15
SNF8-216ENST00000573795 ZC3H15Q8WU90 426 aaKnown RBP28.51■■■□□ 2.15
SNF8-216ENST00000573795 PSMD14O00487 310 aa28.5■■■□□ 2.15
SNF8-216ENST00000573795 CELF2O95319 508 aaKnown RBP28.5■■■□□ 2.15
SNF8-216ENST00000573795 ECE1P42892 770 aa28.5■■■□□ 2.15
SNF8-216ENST00000573795 GNAI1P63096 354 aa28.5■■■□□ 2.15
SNF8-216ENST00000573795 GOLGA2Q08379 1002 aa28.5■■■□□ 2.15
SNF8-216ENST00000573795 RIC3Q7Z5B4 369 aa28.5■■■□□ 2.15
SNF8-216ENST00000573795 SAPCD2Q86UD0 394 aa28.5■■■□□ 2.15
SNF8-216ENST00000573795 MICALL2Q8IY33 904 aa28.5■■■□□ 2.15
SNF8-216ENST00000573795 ZBTB38Q8NAP3 1195 aaPredicted RBP28.5■■■□□ 2.15
SNF8-216ENST00000573795 C8orf58Q8NAV2 365 aa28.5■■■□□ 2.15
SNF8-216ENST00000573795 GPR101Q96P66 508 aaPredicted RBP28.5■■■□□ 2.15
SNF8-216ENST00000573795 RIMBP2O15034 1052 aa28.49■■■□□ 2.15
SNF8-216ENST00000573795 GRM1Q13255 1194 aa28.49■■■□□ 2.15
SNF8-216ENST00000573795 RTL9Q8NET4 1388 aa28.49■■■□□ 2.15
SNF8-216ENST00000573795 RPS8P62241 208 aaKnown RBP28.48■■■□□ 2.15
SNF8-216ENST00000573795 TBC1D16Q8TBP0 767 aa28.48■■■□□ 2.15
SNF8-216ENST00000573795 MYD88Q99836 296 aa28.48■■■□□ 2.15
SNF8-216ENST00000573795 SEC31BQ9NQW1 1179 aa28.48■■■□□ 2.15
SNF8-216ENST00000573795 KCNQ5Q9NR82 932 aa28.48■■■□□ 2.15
SNF8-216ENST00000573795 C6orf229H3BNL8 230 aa28.47■■■□□ 2.15
SNF8-216ENST00000573795 AOC2O75106 756 aa28.47■■■□□ 2.15
SNF8-216ENST00000573795 DPF2Q92785 391 aa28.47■■■□□ 2.15
SNF8-216ENST00000573795 ECE2O60344 883 aa28.46■■■□□ 2.15
SNF8-216ENST00000573795 EGFRP00533 1210 aa28.46■■■□□ 2.15
SNF8-216ENST00000573795 POLR2AP24928 1970 aaKnown RBP28.45■■■□□ 2.14
SNF8-216ENST00000573795 H7C1D1 291 aa28.45■■■□□ 2.14
SNF8-216ENST00000573795 CALD1Q05682 793 aaKnown RBP28.45■■■□□ 2.14
SNF8-216ENST00000573795 DOK7Q18PE1 504 aa28.45■■■□□ 2.14
SNF8-216ENST00000573795 DLK2Q6UY11 383 aa28.45■■■□□ 2.14
SNF8-216ENST00000573795 CDC37L1Q7L3B6 337 aa28.45■■■□□ 2.14
SNF8-216ENST00000573795 SAMD7Q7Z3H4 446 aa28.45■■■□□ 2.14
SNF8-216ENST00000573795 PCCAP05165 728 aaPredicted RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms