RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PI4KAP2A4QPH2 592 aa11.19□□□□□ -0.62
SMG6-210ENST00000572205 C21orf2O43822 256 aa11.19□□□□□ -0.62
SMG6-210ENST00000572205 HCLS1P14317 486 aaPredicted RBP11.19□□□□□ -0.62
SMG6-210ENST00000572205 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
SMG6-210ENST00000572205 PI4KAP1Q8N8J0 262 aa11.19□□□□□ -0.62
SMG6-210ENST00000572205 ZNF622Q969S3 477 aaKnown RBP eCLIP11.19□□□□□ -0.624e-6■■■■□ 24.2
SMG6-210ENST00000572205 MAP3K2Q9Y2U5 619 aa11.19□□□□□ -0.62
SMG6-210ENST00000572205 GOLGA2Q08379 1002 aa11.18□□□□□ -0.62
SMG6-210ENST00000572205 C9orf131Q5VYM1 1079 aa11.18□□□□□ -0.62
SMG6-210ENST00000572205 KSR2Q6VAB6 950 aa11.18□□□□□ -0.62
SMG6-210ENST00000572205 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
SMG6-210ENST00000572205 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
SMG6-210ENST00000572205 FAM89AQ96GI7 184 aa11.18□□□□□ -0.62
SMG6-210ENST00000572205 CRAMP1Q96RY5 1269 aa11.18□□□□□ -0.62
SMG6-210ENST00000572205 MYD88Q99836 296 aa11.18□□□□□ -0.62
SMG6-210ENST00000572205 MYH16Q9H6N6 1097 aa11.18□□□□□ -0.62
SMG6-210ENST00000572205 CDHR2Q9BYE9 1310 aa11.17□□□□□ -0.62
SMG6-210ENST00000572205 ZC3H4Q9UPT8 1303 aaKnown RBP11.17□□□□□ -0.62
SMG6-210ENST00000572205 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
SMG6-210ENST00000572205 E9PSI1 815 aa11.17□□□□□ -0.62
SMG6-210ENST00000572205 CWF19L2Q2TBE0 894 aaKnown RBP11.17□□□□□ -0.62
SMG6-210ENST00000572205 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
SMG6-210ENST00000572205 TRMT112Q9UI30 125 aaKnown RBP11.17□□□□□ -0.62
SMG6-210ENST00000572205 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
SMG6-210ENST00000572205 KIF3CO14782 793 aa11.16□□□□□ -0.62
SMG6-210ENST00000572205 PCCAP05165 728 aaPredicted RBP11.16□□□□□ -0.62
SMG6-210ENST00000572205 SF3B3Q15393 1217 aaKnown RBP11.16□□□□□ -0.62
SMG6-210ENST00000572205 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
SMG6-210ENST00000572205 RNF181Q9P0P0 153 aa11.16□□□□□ -0.62
SMG6-210ENST00000572205 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.62
SMG6-210ENST00000572205 F6X3S4 739 aa11.15□□□□□ -0.62
SMG6-210ENST00000572205 LMNB1P20700 586 aa11.15□□□□□ -0.62
SMG6-210ENST00000572205 CCDC93Q567U6 631 aa11.15□□□□□ -0.62
SMG6-210ENST00000572205 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
SMG6-210ENST00000572205 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
SMG6-210ENST00000572205 STK31Q9BXU1 1019 aa11.15□□□□□ -0.62
SMG6-210ENST00000572205 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
SMG6-210ENST00000572205 POTECB2RU33 542 aa11.14□□□□□ -0.63
SMG6-210ENST00000572205 H7C1W4 665 aa11.14□□□□□ -0.63
SMG6-210ENST00000572205 IRS4O14654 1257 aaPredicted RBP11.14□□□□□ -0.63
SMG6-210ENST00000572205 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
SMG6-210ENST00000572205 FKBP4Q02790 459 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMG6-210ENST00000572205 BEND3Q5T5X7 828 aa11.14□□□□□ -0.63
SMG6-210ENST00000572205 DNAAF4Q8WXU2 420 aa11.14□□□□□ -0.63
SMG6-210ENST00000572205 SSH1Q8WYL5 1049 aa11.14□□□□□ -0.63
SMG6-210ENST00000572205 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
SMG6-210ENST00000572205 CELF1Q92879 486 aaKnown RBP11.14□□□□□ -0.63
SMG6-210ENST00000572205 PSMD1Q99460 953 aa11.14□□□□□ -0.63
SMG6-210ENST00000572205 CWC25Q9NXE8 425 aaPredicted RBP11.14□□□□□ -0.63
SMG6-210ENST00000572205 PCNTO95613 3336 aa11.14□□□□□ -0.63
SMG6-210ENST00000572205 ZNF541Q9H0D2 1346 aa11.13□□□□□ -0.63
SMG6-210ENST00000572205 TULP1O00294 542 aaPredicted RBP11.13□□□□□ -0.63
SMG6-210ENST00000572205 NPHP1O15259 732 aa11.13□□□□□ -0.63
SMG6-210ENST00000572205 DDX58O95786 925 aaKnown RBP11.13□□□□□ -0.63
SMG6-210ENST00000572205 ALDH1B1P30837 517 aa11.13□□□□□ -0.63
SMG6-210ENST00000572205 GRAPQ13588 217 aa11.13□□□□□ -0.63
SMG6-210ENST00000572205 GCKRQ14397 625 aa11.13□□□□□ -0.63
SMG6-210ENST00000572205 RTL5Q5HYW3 569 aaPredicted RBP11.13□□□□□ -0.63
SMG6-210ENST00000572205 GRAPLQ8TC17 118 aaPredicted RBP11.13□□□□□ -0.63
SMG6-210ENST00000572205 NLRP3Q96P20 1036 aa11.13□□□□□ -0.63
SMG6-210ENST00000572205 RTFDC1Q9BY42 306 aaPredicted RBP11.13□□□□□ -0.63
SMG6-210ENST00000572205 NMRK2Q9NPI5 230 aa11.13□□□□□ -0.63
SMG6-210ENST00000572205 ATP6V0A2Q9Y487 856 aa11.13□□□□□ -0.63
SMG6-210ENST00000572205 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
SMG6-210ENST00000572205 GTF2E1P29083 439 aaPredicted RBP11.12□□□□□ -0.63
SMG6-210ENST00000572205 BRPF1P55201 1214 aaPredicted RBP11.12□□□□□ -0.63
SMG6-210ENST00000572205 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
SMG6-210ENST00000572205 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
SMG6-210ENST00000572205 LINS1Q8NG48 757 aa11.12□□□□□ -0.63
SMG6-210ENST00000572205 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
SMG6-210ENST00000572205 KAZALD1Q96I82 304 aa11.12□□□□□ -0.63
SMG6-210ENST00000572205 PLA2G12BQ9BX93 195 aa11.12□□□□□ -0.63
SMG6-210ENST00000572205 CHMP4AQ9BY43 222 aa11.12□□□□□ -0.63
SMG6-210ENST00000572205 SEC31BQ9NQW1 1179 aa11.12□□□□□ -0.63
SMG6-210ENST00000572205 UTYO14607 1347 aa11.11□□□□□ -0.63
SMG6-210ENST00000572205 ZBED9Q6R2W3 1325 aa11.11□□□□□ -0.63
SMG6-210ENST00000572205 CTSWP56202 376 aa11.11□□□□□ -0.63
SMG6-210ENST00000572205 RBM17Q96I25 401 aaKnown RBP11.11□□□□□ -0.63
SMG6-210ENST00000572205 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
SMG6-210ENST00000572205 FZD9O00144 591 aa11.1□□□□□ -0.63
SMG6-210ENST00000572205 PDE8AO60658 829 aa11.1□□□□□ -0.63
SMG6-210ENST00000572205 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
SMG6-210ENST00000572205 EPHA10Q5JZY3 1008 aa11.1□□□□□ -0.63
SMG6-210ENST00000572205 UBE3BQ7Z3V4 1068 aa11.1□□□□□ -0.63
SMG6-210ENST00000572205 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
SMG6-210ENST00000572205 ZNF526Q8TF50 670 aaPredicted RBP11.1□□□□□ -0.63
SMG6-210ENST00000572205 BCL2L13Q9BXK5 485 aa11.1□□□□□ -0.63
SMG6-210ENST00000572205 IRS2Q9Y4H2 1338 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 GLTPD2A6NH11 291 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 CSF1RP07333 972 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 IARSP41252 1262 aaKnown RBP11.09□□□□□ -0.63
SMG6-210ENST00000572205 NUBP1P53384 320 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 FOXO4P98177 505 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 CC2D2BQ6DHV5 1058 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 SP8Q8IXZ3 490 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 RTKN2Q8IZC4 609 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 GREM2Q9H772 168 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 ZNF609O15014 1411 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 PTPRCP08575 1304 aa11.09□□□□□ -0.63
SMG6-210ENST00000572205 WTIPA6NIX2 430 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms