RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 BEND3Q5T5X7 828 aa22.98■■□□□ 1.27
TRADD-205ENST00000566247 ZBED9Q6R2W3 1325 aa22.98■■□□□ 1.27
TRADD-205ENST00000566247 FER1L6Q2WGJ9 1857 aa22.97■■□□□ 1.27
TRADD-205ENST00000566247 PRELPP51888 382 aa22.97■■□□□ 1.27
TRADD-205ENST00000566247 GRIPAP1Q4V328 841 aa22.97■■□□□ 1.27
TRADD-205ENST00000566247 GPBP1L1Q9HC44 474 aaPredicted RBP22.97■■□□□ 1.27
TRADD-205ENST00000566247 ATP6V0A2Q9Y487 856 aa22.97■■□□□ 1.27
TRADD-205ENST00000566247 H7C1W4 665 aa22.96■■□□□ 1.27
TRADD-205ENST00000566247 CCDC85AQ96PX6 553 aaPredicted RBP22.96■■□□□ 1.27
TRADD-205ENST00000566247 CTSWP56202 376 aa22.95■■□□□ 1.26
TRADD-205ENST00000566247 TMC4Q7Z404 712 aa22.95■■□□□ 1.26
TRADD-205ENST00000566247 SRCIN1Q9C0H9 1055 aa22.95■■□□□ 1.26
TRADD-205ENST00000566247 ZNF277Q9NRM2 450 aaPredicted RBP22.95■■□□□ 1.26
TRADD-205ENST00000566247 ZC3H4Q9UPT8 1303 aaKnown RBP22.95■■□□□ 1.26
TRADD-205ENST00000566247 SBF1O95248 1867 aa22.94■■□□□ 1.26
TRADD-205ENST00000566247 SLC51AQ86UW1 340 aa22.94■■□□□ 1.26
TRADD-205ENST00000566247 CELF1Q92879 486 aaKnown RBP22.94■■□□□ 1.26
TRADD-205ENST00000566247 PSMD1Q99460 953 aa22.94■■□□□ 1.26
TRADD-205ENST00000566247 ALDH1L1O75891 902 aa22.93■■□□□ 1.26
TRADD-205ENST00000566247 SP8Q8IXZ3 490 aa22.93■■□□□ 1.26
TRADD-205ENST00000566247 RARSP54136 660 aaKnown RBP22.92■■□□□ 1.26
TRADD-205ENST00000566247 SEC31BQ9NQW1 1179 aa22.92■■□□□ 1.26
TRADD-205ENST00000566247 C9orf78Q9NZ63 289 aaPredicted RBP22.92■■□□□ 1.26
TRADD-205ENST00000566247 KDM2BQ8NHM5 1336 aa22.91■■□□□ 1.26
TRADD-205ENST00000566247 IARSP41252 1262 aaKnown RBP22.91■■□□□ 1.26
TRADD-205ENST00000566247 RPS8P62241 208 aaKnown RBP22.91■■□□□ 1.26
TRADD-205ENST00000566247 DPP8Q6V1X1 898 aaPredicted RBP22.91■■□□□ 1.26
TRADD-205ENST00000566247 TIAM2Q8IVF5 1701 aa22.91■■□□□ 1.26
TRADD-205ENST00000566247 SNED1Q8TER0 1413 aa22.91■■□□□ 1.26
TRADD-205ENST00000566247 GRM8O00222 908 aa22.9■■□□□ 1.26
TRADD-205ENST00000566247 CASP7P55210 303 aa22.9■■□□□ 1.26
TRADD-205ENST00000566247 MPNDQ8N594 471 aa22.9■■□□□ 1.26
TRADD-205ENST00000566247 SUPT20HQ8NEM7 779 aa22.9■■□□□ 1.26
TRADD-205ENST00000566247 TTLL11Q8NHH1 800 aa22.9■■□□□ 1.26
TRADD-205ENST00000566247 CDC5LQ99459 802 aaKnown RBP22.9■■□□□ 1.26
TRADD-205ENST00000566247 NOB1Q9ULX3 412 aaKnown RBP22.9■■□□□ 1.26
TRADD-205ENST00000566247 KIF16BQ96L93 1317 aa22.89■■□□□ 1.26
TRADD-205ENST00000566247 ANKRD18AQ8IVF6 992 aa22.89■■□□□ 1.25
TRADD-205ENST00000566247 PLA2G12BQ9BX93 195 aa22.89■■□□□ 1.25
TRADD-205ENST00000566247 CCDC88AQ3V6T2 1871 aa22.88■■□□□ 1.25
TRADD-205ENST00000566247 API5Q9BZZ5 524 aaKnown RBP22.88■■□□□ 1.25
TRADD-205ENST00000566247 GREM2Q9H772 168 aa22.88■■□□□ 1.25
TRADD-205ENST00000566247 TAF1P21675 1872 aa22.88■■□□□ 1.25
TRADD-205ENST00000566247 BRPF1P55201 1214 aaPredicted RBP22.87■■□□□ 1.25
TRADD-205ENST00000566247 DPY19L2Q6NUT2 758 aa22.87■■□□□ 1.25
TRADD-205ENST00000566247 LARGE2Q8N3Y3 721 aa22.87■■□□□ 1.25
TRADD-205ENST00000566247 JDP2Q8WYK2 163 aa22.87■■□□□ 1.25
TRADD-205ENST00000566247 NSFL1CQ9UNZ2 370 aaKnown RBP22.86■■□□□ 1.25
TRADD-205ENST00000566247 CHMP3Q9Y3E7 222 aa22.86■■□□□ 1.25
TRADD-205ENST00000566247 RTL9Q8NET4 1388 aa22.86■■□□□ 1.25
TRADD-205ENST00000566247 COL4A1P02462 1669 aa22.85■■□□□ 1.25
TRADD-205ENST00000566247 GLTPD2A6NH11 291 aa22.85■■□□□ 1.25
TRADD-205ENST00000566247 PPIP5K2O43314 1243 aa22.85■■□□□ 1.25
TRADD-205ENST00000566247 FAM161AQ3B820 660 aa22.85■■□□□ 1.25
TRADD-205ENST00000566247 MYH3P11055 1940 aa22.84■■□□□ 1.25
TRADD-205ENST00000566247 IGHMBP2P38935 993 aaKnown RBP22.84■■□□□ 1.25
TRADD-205ENST00000566247 RTFDC1Q9BY42 306 aaPredicted RBP22.84■■□□□ 1.25
TRADD-205ENST00000566247 NMRK2Q9NPI5 230 aa22.84■■□□□ 1.25
TRADD-205ENST00000566247 DICER1Q9UPY3 1922 aaKnown RBP22.84■■□□□ 1.25
TRADD-205ENST00000566247 LRRC37AA6NMS7 1700 aa22.83■■□□□ 1.25
TRADD-205ENST00000566247 IPO8O15397 1037 aaKnown RBP22.83■■□□□ 1.25
TRADD-205ENST00000566247 CSF1RP07333 972 aa22.83■■□□□ 1.25
TRADD-205ENST00000566247 ITGA6P23229 1130 aa22.83■■□□□ 1.25
TRADD-205ENST00000566247 CCT4P50991 539 aaKnown RBP22.83■■□□□ 1.25
TRADD-205ENST00000566247 GPSM2P81274 684 aa22.83■■□□□ 1.25
TRADD-205ENST00000566247 AOC3Q16853 763 aa22.83■■□□□ 1.25
TRADD-205ENST00000566247 NIM1KQ8IY84 436 aa22.83■■□□□ 1.25
TRADD-205ENST00000566247 FRAT1Q92837 279 aaPredicted RBP22.83■■□□□ 1.25
TRADD-205ENST00000566247 VPS33BQ9H267 617 aa22.83■■□□□ 1.25
TRADD-205ENST00000566247 ANKIB1Q9P2G1 1089 aa22.83■■□□□ 1.25
TRADD-205ENST00000566247 C6orf229H3BNL8 230 aa22.82■■□□□ 1.24
TRADD-205ENST00000566247 BCAR3O75815 825 aa22.82■■□□□ 1.24
TRADD-205ENST00000566247 FOXO4P98177 505 aa22.82■■□□□ 1.24
TRADD-205ENST00000566247 ANKRD18BA2A2Z9 1011 aa22.81■■□□□ 1.24
TRADD-205ENST00000566247 NBPF7P0C2Y1 421 aaPredicted RBP22.81■■□□□ 1.24
TRADD-205ENST00000566247 IFIT5Q13325 482 aaKnown RBP22.81■■□□□ 1.24
TRADD-205ENST00000566247 LMBR1LQ6UX01 489 aa22.81■■□□□ 1.24
TRADD-205ENST00000566247 ARHGAP45Q92619 1136 aa22.81■■□□□ 1.24
TRADD-205ENST00000566247 SUCLG2Q96I99 432 aa22.81■■□□□ 1.24
TRADD-205ENST00000566247 RRAGCQ9HB90 399 aa22.81■■□□□ 1.24
TRADD-205ENST00000566247 EIF6P56537 245 aaKnown RBP22.8■■□□□ 1.24
TRADD-205ENST00000566247 C16orf71Q8IYS4 520 aaPredicted RBP22.8■■□□□ 1.24
TRADD-205ENST00000566247 EYA3Q99504 573 aa22.8■■□□□ 1.24
TRADD-205ENST00000566247 MPHOSPH8Q99549 860 aa22.8■■□□□ 1.24
TRADD-205ENST00000566247 BSDC1Q9NW68 430 aaPredicted RBP22.8■■□□□ 1.24
TRADD-205ENST00000566247 UTYO14607 1347 aa22.8■■□□□ 1.24
TRADD-205ENST00000566247 ZNF541Q9H0D2 1346 aa22.8■■□□□ 1.24
TRADD-205ENST00000566247 FZD9O00144 591 aa22.79■■□□□ 1.24
TRADD-205ENST00000566247 KIF3CO14782 793 aa22.79■■□□□ 1.24
TRADD-205ENST00000566247 DDNO94850 711 aaPredicted RBP22.79■■□□□ 1.24
TRADD-205ENST00000566247 KIAA2012Q0VF49 1180 aa22.79■■□□□ 1.24
TRADD-205ENST00000566247 CCDC57Q2TAC2 916 aa22.79■■□□□ 1.24
TRADD-205ENST00000566247 TAF7LQ5H9L4 462 aa22.79■■□□□ 1.24
TRADD-205ENST00000566247 EPHA10Q5JZY3 1008 aa22.79■■□□□ 1.24
TRADD-205ENST00000566247 UFL1O94874 794 aa22.78■■□□□ 1.24
TRADD-205ENST00000566247 WASHC4Q2M389 1173 aa22.78■■□□□ 1.24
TRADD-205ENST00000566247 TBC1D16Q8TBP0 767 aa22.78■■□□□ 1.24
TRADD-205ENST00000566247 DUOX1Q9NRD9 1551 aa22.78■■□□□ 1.24
TRADD-205ENST00000566247 PODXL2Q9NZ53 605 aa22.78■■□□□ 1.24
TRADD-205ENST00000566247 POLLQ9UGP5 575 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms