RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 CHMP4AQ9BY43 222 aa17.42■□□□□ 0.38
USB1-205ENST00000561743 IRS4O14654 1257 aaPredicted RBP17.41■□□□□ 0.38
USB1-205ENST00000561743 PPIP5K2O43314 1243 aa17.41■□□□□ 0.38
USB1-205ENST00000561743 EIF6P56537 245 aaKnown RBP17.41■□□□□ 0.38
USB1-205ENST00000561743 SF3B3Q15393 1217 aaKnown RBP17.41■□□□□ 0.38
USB1-205ENST00000561743 AOC3Q16853 763 aa17.41■□□□□ 0.38
USB1-205ENST00000561743 KLRG1Q96E93 195 aa17.41■□□□□ 0.38
USB1-205ENST00000561743 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
USB1-205ENST00000561743 TWISTNBQ3B726 338 aaPredicted RBP17.4■□□□□ 0.38
USB1-205ENST00000561743 DPP8Q6V1X1 898 aaPredicted RBP17.4■□□□□ 0.38
USB1-205ENST00000561743 LDHDQ86WU2 507 aa17.4■□□□□ 0.38
USB1-205ENST00000561743 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
USB1-205ENST00000561743 MPNDQ8N594 471 aa17.4■□□□□ 0.38
USB1-205ENST00000561743 ZBTB38Q8NAP3 1195 aaPredicted RBP17.4■□□□□ 0.38
USB1-205ENST00000561743 SUPT20HQ8NEM7 779 aa17.4■□□□□ 0.38
USB1-205ENST00000561743 METTL22Q9BUU2 404 aaPredicted RBP17.4■□□□□ 0.38
USB1-205ENST00000561743 VPS33BQ9H267 617 aa17.4■□□□□ 0.38
USB1-205ENST00000561743 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
USB1-205ENST00000561743 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
USB1-205ENST00000561743 EPHX2P34913 555 aa17.39■□□□□ 0.37
USB1-205ENST00000561743 TMC4Q7Z404 712 aa17.39■□□□□ 0.37
USB1-205ENST00000561743 CCDC191Q8NCU4 936 aa17.39■□□□□ 0.37
USB1-205ENST00000561743 CELF1Q92879 486 aaKnown RBP17.39■□□□□ 0.37
USB1-205ENST00000561743 GJA3Q9Y6H8 435 aa17.39■□□□□ 0.37
USB1-205ENST00000561743 SPEF2Q9C093 1822 aa17.39■□□□□ 0.37
USB1-205ENST00000561743 EAPPQ56P03 285 aaPredicted RBP17.38■□□□□ 0.37
USB1-205ENST00000561743 STK31Q9BXU1 1019 aa17.38■□□□□ 0.37
USB1-205ENST00000561743 MAP3K2Q9Y2U5 619 aa17.38■□□□□ 0.37
USB1-205ENST00000561743 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
USB1-205ENST00000561743 PI4KAP2A4QPH2 592 aa17.37■□□□□ 0.37
USB1-205ENST00000561743 PCCAP05165 728 aaPredicted RBP17.37■□□□□ 0.37
USB1-205ENST00000561743 SCNN1DP51172 638 aa17.37■□□□□ 0.37
USB1-205ENST00000561743 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
USB1-205ENST00000561743 KSR2Q6VAB6 950 aa17.37■□□□□ 0.37
USB1-205ENST00000561743 WDR63Q8IWG1 891 aa17.37■□□□□ 0.37
USB1-205ENST00000561743 PI4KAP1Q8N8J0 262 aa17.37■□□□□ 0.37
USB1-205ENST00000561743 JMYQ8N9B5 988 aa17.37■□□□□ 0.37
USB1-205ENST00000561743 CWC25Q9NXE8 425 aaPredicted RBP17.37■□□□□ 0.37
USB1-205ENST00000561743 PCNTO95613 3336 aa17.36■□□□□ 0.37
USB1-205ENST00000561743 G2E3Q7L622 706 aa17.36■□□□□ 0.37
USB1-205ENST00000561743 PNMA8AQ86V59 439 aaPredicted RBP17.36■□□□□ 0.37
USB1-205ENST00000561743 ZNRF3Q9ULT6 936 aa17.36■□□□□ 0.37
USB1-205ENST00000561743 PASKQ96RG2 1323 aa17.36■□□□□ 0.37
USB1-205ENST00000561743 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
USB1-205ENST00000561743 IGKV5-2P06315 115 aa17.35■□□□□ 0.37
USB1-205ENST00000561743 FAM9BQ8IZU0 186 aa17.35■□□□□ 0.37
USB1-205ENST00000561743 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
USB1-205ENST00000561743 PDE8AO60658 829 aa17.34■□□□□ 0.37
USB1-205ENST00000561743 ITGBL1O95965 494 aaPredicted RBP17.34■□□□□ 0.37
USB1-205ENST00000561743 HSP90B1P14625 803 aaKnown RBP17.34■□□□□ 0.37
USB1-205ENST00000561743 LMOD1P29536 600 aaPredicted RBP17.34■□□□□ 0.37
USB1-205ENST00000561743 CXCL9Q07325 125 aa17.34■□□□□ 0.37
USB1-205ENST00000561743 CDHR2Q9BYE9 1310 aa17.34■□□□□ 0.37
USB1-205ENST00000561743 SEC31BQ9NQW1 1179 aa17.34■□□□□ 0.37
USB1-205ENST00000561743 CREBZFQ9NS37 354 aa17.34■□□□□ 0.37
USB1-205ENST00000561743 EPS15P42566 896 aa17.33■□□□□ 0.36
USB1-205ENST00000561743 RPS8P62241 208 aaKnown RBP17.33■□□□□ 0.36
USB1-205ENST00000561743 GPSM2P81274 684 aa17.33■□□□□ 0.36
USB1-205ENST00000561743 CWF19L2Q2TBE0 894 aaKnown RBP17.33■□□□□ 0.36
USB1-205ENST00000561743 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
USB1-205ENST00000561743 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
USB1-205ENST00000561743 CLEC11AQ9Y240 323 aa17.33■□□□□ 0.36
USB1-205ENST00000561743 SCN9AQ15858 1988 aa17.32■□□□□ 0.36
USB1-205ENST00000561743 YDJCA8MPS7 323 aa17.32■□□□□ 0.36
USB1-205ENST00000561743 VAMP4O75379 141 aa17.32■□□□□ 0.36
USB1-205ENST00000561743 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
USB1-205ENST00000561743 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
USB1-205ENST00000561743 FLIIQ13045 1269 aa17.32■□□□□ 0.36
USB1-205ENST00000561743 CCDC152Q4G0S7 254 aa17.32■□□□□ 0.36
USB1-205ENST00000561743 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
USB1-205ENST00000561743 POLLQ9UGP5 575 aa17.32■□□□□ 0.36
USB1-205ENST00000561743 TRPM7Q96QT4 1865 aa17.32■□□□□ 0.36
USB1-205ENST00000561743 PSME4Q14997 1843 aa17.31■□□□□ 0.36
USB1-205ENST00000561743 NEURL1BA8MQ27 555 aa17.31■□□□□ 0.36
USB1-205ENST00000561743 WASHC4Q2M389 1173 aa17.31■□□□□ 0.36
USB1-205ENST00000561743 CCDC85AQ96PX6 553 aaPredicted RBP17.31■□□□□ 0.36
USB1-205ENST00000561743 GPRC5DQ9NZD1 345 aa17.31■□□□□ 0.36
USB1-205ENST00000561743 RAD17O75943 681 aa17.3■□□□□ 0.36
USB1-205ENST00000561743 CIAPIN1Q6FI81 312 aa17.3■□□□□ 0.36
USB1-205ENST00000561743 CNTROBQ8N137 903 aa17.3■□□□□ 0.36
USB1-205ENST00000561743 C6orf229H3BNL8 230 aa17.29■□□□□ 0.36
USB1-205ENST00000561743 GMPSP49915 693 aaPredicted RBP17.29■□□□□ 0.36
USB1-205ENST00000561743 CTSWP56202 376 aa17.29■□□□□ 0.36
USB1-205ENST00000561743 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
USB1-205ENST00000561743 USP50Q70EL3 339 aaPredicted RBP17.29■□□□□ 0.36
USB1-205ENST00000561743 TBC1D16Q8TBP0 767 aa17.29■□□□□ 0.36
USB1-205ENST00000561743 PODXL2Q9NZ53 605 aa17.29■□□□□ 0.36
USB1-205ENST00000561743 RIMBP2O15034 1052 aa17.28■□□□□ 0.36
USB1-205ENST00000561743 TNIP1Q15025 636 aa17.28■□□□□ 0.36
USB1-205ENST00000561743 TTLL11Q8NHH1 800 aa17.28■□□□□ 0.36
USB1-205ENST00000561743 GPR101Q96P66 508 aaPredicted RBP17.28■□□□□ 0.36
USB1-205ENST00000561743 DBNDD1Q9H9R9 158 aa17.28■□□□□ 0.36
USB1-205ENST00000561743 ADARB2Q9NS39 739 aaKnown RBP17.28■□□□□ 0.36
USB1-205ENST00000561743 ZNF521Q96K83 1311 aa17.27■□□□□ 0.36
USB1-205ENST00000561743 TMEM88BA6NKF7 163 aa17.27■□□□□ 0.36
USB1-205ENST00000561743 H7C1W4 665 aa17.27■□□□□ 0.36
USB1-205ENST00000561743 GCKRQ14397 625 aa17.27■□□□□ 0.36
USB1-205ENST00000561743 UBE3BQ7Z3V4 1068 aa17.27■□□□□ 0.36
USB1-205ENST00000561743 ANKRD18AQ8IVF6 992 aa17.27■□□□□ 0.36
USB1-205ENST00000561743 DNAAF4Q8WXU2 420 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms