RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 CNTNAP1P78357 1384 aa23.21■■□□□ 1.31
RPL28-210ENST00000560583 HSPA1AP0DMV8 641 aaKnown RBP23.2■■□□□ 1.3
RPL28-210ENST00000560583 HSPA1BP0DMV9 641 aaKnown RBP23.2■■□□□ 1.3
RPL28-210ENST00000560583 EPS15P42566 896 aa23.2■■□□□ 1.3
RPL28-210ENST00000560583 DPP8Q6V1X1 898 aaPredicted RBP23.2■■□□□ 1.3
RPL28-210ENST00000560583 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
RPL28-210ENST00000560583 VPS33BQ9H267 617 aa23.2■■□□□ 1.3
RPL28-210ENST00000560583 CLEC11AQ9Y240 323 aa23.2■■□□□ 1.3
RPL28-210ENST00000560583 CALD1Q05682 793 aaKnown RBP23.19■■□□□ 1.3
RPL28-210ENST00000560583 TRIM28Q13263 835 aaKnown RBP23.19■■□□□ 1.3
RPL28-210ENST00000560583 COL13A1Q5TAT6 717 aaPredicted RBP23.19■■□□□ 1.3
RPL28-210ENST00000560583 MPNDQ8N594 471 aa23.19■■□□□ 1.3
RPL28-210ENST00000560583 TRPM7Q96QT4 1865 aa23.19■■□□□ 1.3
RPL28-210ENST00000560583 KIAA2012Q0VF49 1180 aa23.18■■□□□ 1.3
RPL28-210ENST00000560583 SF3B3Q15393 1217 aaKnown RBP23.18■■□□□ 1.3
RPL28-210ENST00000560583 SUPT20HQ8NEM7 779 aa23.18■■□□□ 1.3
RPL28-210ENST00000560583 CELF1Q92879 486 aaKnown RBP23.18■■□□□ 1.3
RPL28-210ENST00000560583 TMX4Q9H1E5 349 aaPredicted RBP23.18■■□□□ 1.3
RPL28-210ENST00000560583 LMOD1P29536 600 aaPredicted RBP23.17■■□□□ 1.3
RPL28-210ENST00000560583 CXCL9Q07325 125 aa23.17■■□□□ 1.3
RPL28-210ENST00000560583 RTL5Q5HYW3 569 aaPredicted RBP23.17■■□□□ 1.3
RPL28-210ENST00000560583 CNTROBQ8N137 903 aa23.17■■□□□ 1.3
RPL28-210ENST00000560583 ZNRF3Q9ULT6 936 aa23.17■■□□□ 1.3
RPL28-210ENST00000560583 TMEM88BA6NKF7 163 aa23.16■■□□□ 1.3
RPL28-210ENST00000560583 GOLGA2Q08379 1002 aa23.16■■□□□ 1.3
RPL28-210ENST00000560583 TSPYL6Q8N831 410 aa23.16■■□□□ 1.3
RPL28-210ENST00000560583 THSD7BQ9C0I4 1608 aa23.15■■□□□ 1.3
RPL28-210ENST00000560583 TMC4Q7Z404 712 aa23.15■■□□□ 1.3
RPL28-210ENST00000560583 IRS4O14654 1257 aaPredicted RBP23.14■■□□□ 1.29
RPL28-210ENST00000560583 RIC3Q7Z5B4 369 aa23.14■■□□□ 1.29
RPL28-210ENST00000560583 TSR2Q969E8 191 aaKnown RBP23.14■■□□□ 1.29
RPL28-210ENST00000560583 GPRC5DQ9NZD1 345 aa23.14■■□□□ 1.29
RPL28-210ENST00000560583 YDJCA8MPS7 323 aa23.13■■□□□ 1.29
RPL28-210ENST00000560583 FMR1Q06787 632 aaKnown RBP eCLIP23.13■■□□□ 1.29
RPL28-210ENST00000560583 MYD88Q99836 296 aa23.13■■□□□ 1.29
RPL28-210ENST00000560583 MYH3P11055 1940 aa23.13■■□□□ 1.29
RPL28-210ENST00000560583 SCN9AQ15858 1988 aa23.12■■□□□ 1.29
RPL28-210ENST00000560583 GMPSP49915 693 aaPredicted RBP23.12■■□□□ 1.29
RPL28-210ENST00000560583 USP50Q70EL3 339 aaPredicted RBP23.12■■□□□ 1.29
RPL28-210ENST00000560583 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
RPL28-210ENST00000560583 SPEF2Q9C093 1822 aa23.12■■□□□ 1.29
RPL28-210ENST00000560583 VEGFBP49765 207 aa23.11■■□□□ 1.29
RPL28-210ENST00000560583 CCDC27Q2M243 656 aa23.11■■□□□ 1.29
RPL28-210ENST00000560583 CIAPIN1Q6FI81 312 aa23.11■■□□□ 1.29
RPL28-210ENST00000560583 CDHR2Q9BYE9 1310 aa23.1■■□□□ 1.29
RPL28-210ENST00000560583 RAD17O75943 681 aa23.1■■□□□ 1.29
RPL28-210ENST00000560583 GPSM2P81274 684 aa23.1■■□□□ 1.29
RPL28-210ENST00000560583 CCDC30Q5VVM6 783 aa23.1■■□□□ 1.29
RPL28-210ENST00000560583 ADARB2Q9NS39 739 aaKnown RBP23.1■■□□□ 1.29
RPL28-210ENST00000560583 RASSF10A6NK89 507 aa23.09■■□□□ 1.29
RPL28-210ENST00000560583 PCCAP05165 728 aaPredicted RBP23.09■■□□□ 1.29
RPL28-210ENST00000560583 WWC1Q8IX03 1113 aa23.09■■□□□ 1.29
RPL28-210ENST00000560583 CCDC191Q8NCU4 936 aa23.09■■□□□ 1.29
RPL28-210ENST00000560583 METTL22Q9BUU2 404 aaPredicted RBP23.09■■□□□ 1.29
RPL28-210ENST00000560583 SEC31BQ9NQW1 1179 aa23.09■■□□□ 1.29
RPL28-210ENST00000560583 POLLQ9UGP5 575 aa23.09■■□□□ 1.29
RPL28-210ENST00000560583 PSME4Q14997 1843 aa23.09■■□□□ 1.29
RPL28-210ENST00000560583 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.29
RPL28-210ENST00000560583 JARID2Q92833 1246 aaPredicted RBP23.08■■□□□ 1.29
RPL28-210ENST00000560583 NSFL1CQ9UNZ2 370 aaKnown RBP23.08■■□□□ 1.29
RPL28-210ENST00000560583 SHTN1A0MZ66 631 aa23.07■■□□□ 1.28
RPL28-210ENST00000560583 TRAF5O00463 557 aa23.07■■□□□ 1.28
RPL28-210ENST00000560583 GPR101Q96P66 508 aaPredicted RBP23.07■■□□□ 1.28
RPL28-210ENST00000560583 CWC25Q9NXE8 425 aaPredicted RBP23.07■■□□□ 1.28
RPL28-210ENST00000560583 MAP3K2Q9Y2U5 619 aa23.07■■□□□ 1.28
RPL28-210ENST00000560583 RPS8P62241 208 aaKnown RBP23.06■■□□□ 1.28
RPL28-210ENST00000560583 TRPM4Q8TD43 1214 aa23.06■■□□□ 1.28
RPL28-210ENST00000560583 DBNDD1Q9H9R9 158 aa23.06■■□□□ 1.28
RPL28-210ENST00000560583 RTL9Q8NET4 1388 aa23.05■■□□□ 1.28
RPL28-210ENST00000560583 DDX58O95786 925 aaKnown RBP23.05■■□□□ 1.28
RPL28-210ENST00000560583 IGKV5-2P06315 115 aa23.05■■□□□ 1.28
RPL28-210ENST00000560583 HIRAP54198 1017 aaPredicted RBP23.05■■□□□ 1.28
RPL28-210ENST00000560583 TNIP1Q15025 636 aa23.05■■□□□ 1.28
RPL28-210ENST00000560583 WASHC4Q2M389 1173 aa23.05■■□□□ 1.28
RPL28-210ENST00000560583 CACNA1FO60840 1977 aa23.05■■□□□ 1.28
RPL28-210ENST00000560583 ZNF646O15015 1829 aaPredicted RBP23.04■■□□□ 1.28
RPL28-210ENST00000560583 RIMBP2O15034 1052 aa23.04■■□□□ 1.28
RPL28-210ENST00000560583 FOXN1O15353 648 aa23.04■■□□□ 1.28
RPL28-210ENST00000560583 CST9Q5W186 159 aa23.04■■□□□ 1.28
RPL28-210ENST00000560583 KSR2Q6VAB6 950 aa23.04■■□□□ 1.28
RPL28-210ENST00000560583 G2E3Q7L622 706 aa23.04■■□□□ 1.28
RPL28-210ENST00000560583 TBC1D16Q8TBP0 767 aa23.04■■□□□ 1.28
RPL28-210ENST00000560583 MRS2Q9HD23 443 aa23.04■■□□□ 1.28
RPL28-210ENST00000560583 IL16Q14005 1332 aa23.04■■□□□ 1.28
RPL28-210ENST00000560583 PI4KAP2A4QPH2 592 aa23.03■■□□□ 1.28
RPL28-210ENST00000560583 C6orf229H3BNL8 230 aa23.03■■□□□ 1.28
RPL28-210ENST00000560583 PDE8AO60658 829 aa23.03■■□□□ 1.28
RPL28-210ENST00000560583 DEFB115Q30KQ5 88 aa23.03■■□□□ 1.28
RPL28-210ENST00000560583 TWISTNBQ3B726 338 aaPredicted RBP23.03■■□□□ 1.28
RPL28-210ENST00000560583 TNS4Q8IZW8 715 aa23.03■■□□□ 1.28
RPL28-210ENST00000560583 PI4KAP1Q8N8J0 262 aa23.03■■□□□ 1.28
RPL28-210ENST00000560583 CCDC85AQ96PX6 553 aaPredicted RBP23.03■■□□□ 1.28
RPL28-210ENST00000560583 BCL2L13Q9BXK5 485 aa23.03■■□□□ 1.28
RPL28-210ENST00000560583 PODXL2Q9NZ53 605 aa23.03■■□□□ 1.28
RPL28-210ENST00000560583 PGAP2Q9UHJ9 254 aa23.03■■□□□ 1.28
RPL28-210ENST00000560583 ABT1Q9ULW3 272 aaKnown RBP23.03■■□□□ 1.28
RPL28-210ENST00000560583 ZBTB12Q9Y330 459 aaPredicted RBP23.03■■□□□ 1.28
RPL28-210ENST00000560583 PSMD14O00487 310 aa23.02■■□□□ 1.28
RPL28-210ENST00000560583 ECE2O60344 883 aa23.02■■□□□ 1.28
RPL28-210ENST00000560583 CCDC152Q4G0S7 254 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms