RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 CDHR2Q9BYE9 1310 aa14.41□□□□□ -0.1
BMP4-204ENST00000558961 FZD9O00144 591 aa14.41□□□□□ -0.1
BMP4-204ENST00000558961 IRS4O14654 1257 aaPredicted RBP14.41□□□□□ -0.1
BMP4-204ENST00000558961 IGKV5-2P06315 115 aa14.41□□□□□ -0.1
BMP4-204ENST00000558961 VEGFAP15692 232 aaPredicted RBP14.41□□□□□ -0.1
BMP4-204ENST00000558961 HSPA6P17066 643 aa14.41□□□□□ -0.1
BMP4-204ENST00000558961 FLIIQ13045 1269 aa14.41□□□□□ -0.1
BMP4-204ENST00000558961 DDX46Q7L014 1031 aaKnown RBP14.41□□□□□ -0.1
BMP4-204ENST00000558961 SP8Q8IXZ3 490 aa14.41□□□□□ -0.1
BMP4-204ENST00000558961 L3MBTL3Q96JM7 780 aaPredicted RBP14.41□□□□□ -0.1
BMP4-204ENST00000558961 RTFDC1Q9BY42 306 aaPredicted RBP14.41□□□□□ -0.1
BMP4-204ENST00000558961 CWC25Q9NXE8 425 aaPredicted RBP14.41□□□□□ -0.1
BMP4-204ENST00000558961 TCERG1O14776 1098 aaKnown RBP14.4□□□□□ -0.1
BMP4-204ENST00000558961 HSP90B1P14625 803 aaKnown RBP14.4□□□□□ -0.1
BMP4-204ENST00000558961 VPS33BQ9H267 617 aa14.4□□□□□ -0.1
BMP4-204ENST00000558961 ZNF541Q9H0D2 1346 aa14.4□□□□□ -0.1
BMP4-204ENST00000558961 SPEF2Q9C093 1822 aa14.39□□□□□ -0.11
BMP4-204ENST00000558961 FSTL1Q12841 308 aa14.39□□□□□ -0.11
BMP4-204ENST00000558961 C16orf71Q8IYS4 520 aaPredicted RBP14.39□□□□□ -0.11
BMP4-204ENST00000558961 ZNF428Q96B54 188 aa14.39□□□□□ -0.11
BMP4-204ENST00000558961 NEURL1BA8MQ27 555 aa14.38□□□□□ -0.11
BMP4-204ENST00000558961 PDE8AO60658 829 aa14.38□□□□□ -0.11
BMP4-204ENST00000558961 DDNO94850 711 aaPredicted RBP14.38□□□□□ -0.11
BMP4-204ENST00000558961 NEXNQ0ZGT2 675 aa14.38□□□□□ -0.11
BMP4-204ENST00000558961 RTL5Q5HYW3 569 aaPredicted RBP14.38□□□□□ -0.11
BMP4-204ENST00000558961 RTL9Q8NET4 1388 aa14.37□□□□□ -0.11
BMP4-204ENST00000558961 SUPT20HQ8NEM7 779 aa14.37□□□□□ -0.11
BMP4-204ENST00000558961 DNAAF4Q8WXU2 420 aa14.37□□□□□ -0.11
BMP4-204ENST00000558961 JDP2Q8WYK2 163 aa14.37□□□□□ -0.11
BMP4-204ENST00000558961 CELF1Q92879 486 aaKnown RBP14.37□□□□□ -0.11
BMP4-204ENST00000558961 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
BMP4-204ENST00000558961 E9PSI1 815 aa14.36□□□□□ -0.11
BMP4-204ENST00000558961 FKBP5Q13451 457 aaPredicted RBP14.36□□□□□ -0.11
BMP4-204ENST00000558961 CWF19L2Q2TBE0 894 aaKnown RBP14.36□□□□□ -0.11
BMP4-204ENST00000558961 GPC2Q8N158 579 aa14.36□□□□□ -0.11
BMP4-204ENST00000558961 MPNDQ8N594 471 aa14.36□□□□□ -0.11
BMP4-204ENST00000558961 SMC1BQ8NDV3 1235 aa14.36□□□□□ -0.11
BMP4-204ENST00000558961 LINS1Q8NG48 757 aa14.36□□□□□ -0.11
BMP4-204ENST00000558961 PSME4Q14997 1843 aa14.36□□□□□ -0.11
BMP4-204ENST00000558961 IQCA1LA6NCM1 817 aa14.35□□□□□ -0.11
BMP4-204ENST00000558961 H7C1W4 665 aa14.35□□□□□ -0.11
BMP4-204ENST00000558961 CTSWP56202 376 aa14.35□□□□□ -0.11
BMP4-204ENST00000558961 KIAA2012Q0VF49 1180 aa14.35□□□□□ -0.11
BMP4-204ENST00000558961 AOC3Q16853 763 aa14.35□□□□□ -0.11
BMP4-204ENST00000558961 CCDC152Q4G0S7 254 aa14.35□□□□□ -0.11
BMP4-204ENST00000558961 DPP8Q6V1X1 898 aaPredicted RBP14.35□□□□□ -0.11
BMP4-204ENST00000558961 LARGE2Q8N3Y3 721 aa14.35□□□□□ -0.11
BMP4-204ENST00000558961 A0A1B0GUL6 1792 aa14.34□□□□□ -0.11
BMP4-204ENST00000558961 PPIP5K2O43314 1243 aa14.34□□□□□ -0.11
BMP4-204ENST00000558961 CASP7P55210 303 aa14.34□□□□□ -0.11
BMP4-204ENST00000558961 RPS8P62241 208 aaKnown RBP14.34□□□□□ -0.11
BMP4-204ENST00000558961 SLFN5Q08AF3 891 aa14.34□□□□□ -0.11
BMP4-204ENST00000558961 GCKRQ14397 625 aa14.34□□□□□ -0.11
BMP4-204ENST00000558961 PLA2G12BQ9BX93 195 aa14.34□□□□□ -0.11
BMP4-204ENST00000558961 CEP350Q5VT06 3117 aa14.34□□□□□ -0.11
BMP4-204ENST00000558961 APLP1P51693 650 aa14.33□□□□□ -0.12
BMP4-204ENST00000558961 NIM1KQ8IY84 436 aa14.33□□□□□ -0.12
BMP4-204ENST00000558961 TRMT2AQ8IZ69 625 aaKnown RBP14.33□□□□□ -0.12
BMP4-204ENST00000558961 SEC31BQ9NQW1 1179 aa14.33□□□□□ -0.12
BMP4-204ENST00000558961 PODXL2Q9NZ53 605 aa14.33□□□□□ -0.12
BMP4-204ENST00000558961 EIF6P56537 245 aaKnown RBP14.32□□□□□ -0.12
BMP4-204ENST00000558961 BEND3Q5T5X7 828 aa14.32□□□□□ -0.12
BMP4-204ENST00000558961 UBE3BQ7Z3V4 1068 aa14.32□□□□□ -0.12
BMP4-204ENST00000558961 TTLL11Q8NHH1 800 aa14.32□□□□□ -0.12
BMP4-204ENST00000558961 JARID2Q92833 1246 aaPredicted RBP14.32□□□□□ -0.12
BMP4-204ENST00000558961 TAF1DQ9H5J8 278 aaPredicted RBP14.32□□□□□ -0.12
BMP4-204ENST00000558961 ZNF646O15015 1829 aaPredicted RBP14.31□□□□□ -0.12
BMP4-204ENST00000558961 YTHDC1Q96MU7 727 aaKnown RBP14.31□□□□□ -0.12
BMP4-204ENST00000558961 HACL1Q9UJ83 578 aa14.31□□□□□ -0.12
BMP4-204ENST00000558961 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
BMP4-204ENST00000558961 SCN9AQ15858 1988 aa14.31□□□□□ -0.12
BMP4-204ENST00000558961 F6X3S4 739 aa14.3□□□□□ -0.12
BMP4-204ENST00000558961 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
BMP4-204ENST00000558961 POTEJP0CG39 1038 aa14.3□□□□□ -0.12
BMP4-204ENST00000558961 SCNN1DP51172 638 aa14.3□□□□□ -0.12
BMP4-204ENST00000558961 GPSM2P81274 684 aa14.3□□□□□ -0.12
BMP4-204ENST00000558961 LDHDQ86WU2 507 aa14.3□□□□□ -0.12
BMP4-204ENST00000558961 CDC5LQ99459 802 aaKnown RBP14.3□□□□□ -0.12
BMP4-204ENST00000558961 NSFL1CQ9UNZ2 370 aaKnown RBP14.3□□□□□ -0.12
BMP4-204ENST00000558961 CSF1RP07333 972 aa14.29□□□□□ -0.12
BMP4-204ENST00000558961 EPHX2P34913 555 aa14.29□□□□□ -0.12
BMP4-204ENST00000558961 CXCL9Q07325 125 aa14.29□□□□□ -0.12
BMP4-204ENST00000558961 CHADLQ6NUI6 762 aa14.29□□□□□ -0.12
BMP4-204ENST00000558961 ANKRD18AQ8IVF6 992 aa14.29□□□□□ -0.12
BMP4-204ENST00000558961 MRPL50Q8N5N7 158 aaKnown RBP14.29□□□□□ -0.12
BMP4-204ENST00000558961 CDCA7LQ96GN5 454 aa14.29□□□□□ -0.12
BMP4-204ENST00000558961 GREM2Q9H772 168 aa14.29□□□□□ -0.12
BMP4-204ENST00000558961 POLLQ9UGP5 575 aa14.29□□□□□ -0.12
BMP4-204ENST00000558961 YDJCA8MPS7 323 aa14.28□□□□□ -0.12
BMP4-204ENST00000558961 ZNF609O15014 1411 aa14.28□□□□□ -0.12
BMP4-204ENST00000558961 PTPRCP08575 1304 aa14.28□□□□□ -0.12
BMP4-204ENST00000558961 CT47B1P0C2W7 299 aaPredicted RBP14.28□□□□□ -0.12
BMP4-204ENST00000558961 XDHP47989 1333 aa14.28□□□□□ -0.12
BMP4-204ENST00000558961 WASHC4Q2M389 1173 aa14.28□□□□□ -0.12
BMP4-204ENST00000558961 PNMA8AQ86V59 439 aaPredicted RBP14.28□□□□□ -0.12
BMP4-204ENST00000558961 TBC1D16Q8TBP0 767 aa14.28□□□□□ -0.12
BMP4-204ENST00000558961 CCDC85AQ96PX6 553 aaPredicted RBP14.28□□□□□ -0.12
BMP4-204ENST00000558961 BSDC1Q9NW68 430 aaPredicted RBP14.28□□□□□ -0.12
BMP4-204ENST00000558961 GRM8O00222 908 aa14.27□□□□□ -0.13
BMP4-204ENST00000558961 ALDH1L1O75891 902 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms