RNA–Protein interactions for RNA: ENST00000558222.1

PBX4-203, Transcript of PBX homeobox 4, humanhuman

TSL 2

Gene PBX4, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-203ENST00000558222 DPP8Q6V1X1 898 aaPredicted RBP21.41■■□□□ 1.02
PBX4-203ENST00000558222 SP8Q8IXZ3 490 aa21.41■■□□□ 1.02
PBX4-203ENST00000558222 RTFDC1Q9BY42 306 aaPredicted RBP21.41■■□□□ 1.02
PBX4-203ENST00000558222 TMX4Q9H1E5 349 aaPredicted RBP21.41■■□□□ 1.02
PBX4-203ENST00000558222 BBOX1O75936 387 aa21.4■■□□□ 1.02
PBX4-203ENST00000558222 COL13A1Q5TAT6 717 aaPredicted RBP21.4■■□□□ 1.02
PBX4-203ENST00000558222 MPNDQ8N594 471 aa21.4■■□□□ 1.02
PBX4-203ENST00000558222 LMOD1P29536 600 aaPredicted RBP21.39■■□□□ 1.01
PBX4-203ENST00000558222 CALD1Q05682 793 aaKnown RBP21.39■■□□□ 1.01
PBX4-203ENST00000558222 RIC3Q7Z5B4 369 aa21.39■■□□□ 1.01
PBX4-203ENST00000558222 PNMA8AQ86V59 439 aaPredicted RBP21.39■■□□□ 1.01
PBX4-203ENST00000558222 TSPYL6Q8N831 410 aa21.39■■□□□ 1.01
PBX4-203ENST00000558222 CELF1Q92879 486 aaKnown RBP21.39■■□□□ 1.01
PBX4-203ENST00000558222 TSR2Q969E8 191 aaKnown RBP21.39■■□□□ 1.01
PBX4-203ENST00000558222 CNTNAP1P78357 1384 aa21.38■■□□□ 1.01
PBX4-203ENST00000558222 FMR1Q06787 632 aaKnown RBP eCLIP21.38■■□□□ 1.01
PBX4-203ENST00000558222 CXCL9Q07325 125 aa21.38■■□□□ 1.01
PBX4-203ENST00000558222 GOLGA2Q08379 1002 aa21.38■■□□□ 1.01
PBX4-203ENST00000558222 CNTROBQ8N137 903 aa21.38■■□□□ 1.01
PBX4-203ENST00000558222 SUPT20HQ8NEM7 779 aa21.38■■□□□ 1.01
PBX4-203ENST00000558222 MYD88Q99836 296 aa21.38■■□□□ 1.01
PBX4-203ENST00000558222 KIAA2012Q0VF49 1180 aa21.37■■□□□ 1.01
PBX4-203ENST00000558222 JARID2Q92833 1246 aaPredicted RBP21.37■■□□□ 1.01
PBX4-203ENST00000558222 TMEM88BA6NKF7 163 aa21.36■■□□□ 1.01
PBX4-203ENST00000558222 IRS4O14654 1257 aaPredicted RBP21.36■■□□□ 1.01
PBX4-203ENST00000558222 SF3B3Q15393 1217 aaKnown RBP21.36■■□□□ 1.01
PBX4-203ENST00000558222 ZNRF3Q9ULT6 936 aa21.36■■□□□ 1.01
PBX4-203ENST00000558222 YDJCA8MPS7 323 aa21.35■■□□□ 1.01
PBX4-203ENST00000558222 RAD17O75943 681 aa21.35■■□□□ 1.01
PBX4-203ENST00000558222 TRIM28Q13263 835 aaKnown RBP21.35■■□□□ 1.01
PBX4-203ENST00000558222 VPS33BQ9H267 617 aa21.35■■□□□ 1.01
PBX4-203ENST00000558222 PCNTO95613 3336 aa21.34■■□□□ 1.01
PBX4-203ENST00000558222 GMPSP49915 693 aaPredicted RBP21.34■■□□□ 1.01
PBX4-203ENST00000558222 GPR101Q96P66 508 aaPredicted RBP21.34■■□□□ 1.01
PBX4-203ENST00000558222 GPRC5DQ9NZD1 345 aa21.34■■□□□ 1.01
PBX4-203ENST00000558222 GPSM2P81274 684 aa21.33■■□□□ 1.01
PBX4-203ENST00000558222 CIAPIN1Q6FI81 312 aa21.33■■□□□ 1.01
PBX4-203ENST00000558222 ZBTB38Q8NAP3 1195 aaPredicted RBP21.33■■□□□ 1.01
PBX4-203ENST00000558222 SEC31BQ9NQW1 1179 aa21.33■■□□□ 1.01
PBX4-203ENST00000558222 SHTN1A0MZ66 631 aa21.32■■□□□ 1
PBX4-203ENST00000558222 VEGFBP49765 207 aa21.32■■□□□ 1
PBX4-203ENST00000558222 CCDC30Q5VVM6 783 aa21.32■■□□□ 1
PBX4-203ENST00000558222 TMC4Q7Z404 712 aa21.32■■□□□ 1
PBX4-203ENST00000558222 NSFL1CQ9UNZ2 370 aaKnown RBP21.32■■□□□ 1
PBX4-203ENST00000558222 TRAF5O00463 557 aa21.31■■□□□ 1
PBX4-203ENST00000558222 WWC1Q8IX03 1113 aa21.31■■□□□ 1
PBX4-203ENST00000558222 CCDC85AQ96PX6 553 aaPredicted RBP21.31■■□□□ 1
PBX4-203ENST00000558222 POLLQ9UGP5 575 aa21.31■■□□□ 1
PBX4-203ENST00000558222 RIMBP2O15034 1052 aa21.3■■□□□ 1
PBX4-203ENST00000558222 USP50Q70EL3 339 aaPredicted RBP21.3■■□□□ 1
PBX4-203ENST00000558222 METTL22Q9BUU2 404 aaPredicted RBP21.3■■□□□ 1
PBX4-203ENST00000558222 DBNDD1Q9H9R9 158 aa21.3■■□□□ 1
PBX4-203ENST00000558222 MRS2Q9HD23 443 aa21.3■■□□□ 1
PBX4-203ENST00000558222 ADARB2Q9NS39 739 aaKnown RBP21.3■■□□□ 1
PBX4-203ENST00000558222 PCCAP05165 728 aaPredicted RBP21.29■■□□□ 1
PBX4-203ENST00000558222 CCDC191Q8NCU4 936 aa21.29■■□□□ 1
PBX4-203ENST00000558222 TRPM4Q8TD43 1214 aa21.29■■□□□ 1
PBX4-203ENST00000558222 CWC25Q9NXE8 425 aaPredicted RBP21.29■■□□□ 1
PBX4-203ENST00000558222 MAP3K2Q9Y2U5 619 aa21.29■■□□□ 1
PBX4-203ENST00000558222 C6orf229H3BNL8 230 aa21.28■■□□□ 1
PBX4-203ENST00000558222 RPS8P62241 208 aaKnown RBP21.28■■□□□ 1
PBX4-203ENST00000558222 CCDC27Q2M243 656 aa21.28■■□□□ 1
PBX4-203ENST00000558222 WASHC4Q2M389 1173 aa21.28■■□□□ 1
PBX4-203ENST00000558222 G2E3Q7L622 706 aa21.28■■□□□ 1
PBX4-203ENST00000558222 BCL2L13Q9BXK5 485 aa21.28■■□□□ 1
PBX4-203ENST00000558222 ABT1Q9ULW3 272 aaKnown RBP21.28■■□□□ 1
PBX4-203ENST00000558222 ZBTB12Q9Y330 459 aaPredicted RBP21.28■■□□□ 1
PBX4-203ENST00000558222 TRPM7Q96QT4 1865 aa21.28■■□□□ 1
PBX4-203ENST00000558222 PI4KAP2A4QPH2 592 aa21.27■■□□□ 1
PBX4-203ENST00000558222 FOXN1O15353 648 aa21.27■■□□□ 1
PBX4-203ENST00000558222 DDX58O95786 925 aaKnown RBP21.27■■□□□ 1
PBX4-203ENST00000558222 IGKV5-2P06315 115 aa21.27■■□□□ 1
PBX4-203ENST00000558222 PI4KAP1Q8N8J0 262 aa21.27■■□□□ 1
PBX4-203ENST00000558222 SALL2Q9Y467 1007 aaPredicted RBP21.27■■□□□ 1
PBX4-203ENST00000558222 RASSF10A6NK89 507 aa21.26■□□□□ 0.99
PBX4-203ENST00000558222 PSMD14O00487 310 aa21.26■□□□□ 0.99
PBX4-203ENST00000558222 HIRAP54198 1017 aaPredicted RBP21.26■□□□□ 0.99
PBX4-203ENST00000558222 TNIP1Q15025 636 aa21.26■□□□□ 0.99
PBX4-203ENST00000558222 DOK7Q18PE1 504 aa21.26■□□□□ 0.99
PBX4-203ENST00000558222 TWISTNBQ3B726 338 aaPredicted RBP21.26■□□□□ 0.99
PBX4-203ENST00000558222 TNS4Q8IZW8 715 aa21.26■□□□□ 0.99
PBX4-203ENST00000558222 KCNQ5Q9NR82 932 aa21.26■□□□□ 0.99
PBX4-203ENST00000558222 SCN9AQ15858 1988 aa21.26■□□□□ 0.99
PBX4-203ENST00000558222 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
PBX4-203ENST00000558222 ECE2O60344 883 aa21.25■□□□□ 0.99
PBX4-203ENST00000558222 PDE8AO60658 829 aa21.25■□□□□ 0.99
PBX4-203ENST00000558222 DEFB115Q30KQ5 88 aa21.25■□□□□ 0.99
PBX4-203ENST00000558222 KSR2Q6VAB6 950 aa21.25■□□□□ 0.99
PBX4-203ENST00000558222 TBC1D16Q8TBP0 767 aa21.25■□□□□ 0.99
PBX4-203ENST00000558222 GLIS2Q9BZE0 524 aaPredicted RBP21.25■□□□□ 0.99
PBX4-203ENST00000558222 CDHR2Q9BYE9 1310 aa21.25■□□□□ 0.99
PBX4-203ENST00000558222 SPEF2Q9C093 1822 aa21.25■□□□□ 0.99
PBX4-203ENST00000558222 RTL9Q8NET4 1388 aa21.24■□□□□ 0.99
PBX4-203ENST00000558222 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
PBX4-203ENST00000558222 CWF19L2Q2TBE0 894 aaKnown RBP21.24■□□□□ 0.99
PBX4-203ENST00000558222 CCDC152Q4G0S7 254 aa21.24■□□□□ 0.99
PBX4-203ENST00000558222 CST9Q5W186 159 aa21.24■□□□□ 0.99
PBX4-203ENST00000558222 MICALL2Q8IY33 904 aa21.24■□□□□ 0.99
PBX4-203ENST00000558222 STK31Q9BXU1 1019 aa21.24■□□□□ 0.99
PBX4-203ENST00000558222 CNOT7Q9UIV1 285 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms