RNA–Protein interactions for RNA: ENST00000554338.1

RIPK3-202, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 5

Gene RIPK3, Length 500 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-202ENST00000554338 CNTNAP1P78357 1384 aa17.79■□□□□ 0.44
RIPK3-202ENST00000554338 COL13A1Q5TAT6 717 aaPredicted RBP17.78■□□□□ 0.44
RIPK3-202ENST00000554338 DPP8Q6V1X1 898 aaPredicted RBP17.78■□□□□ 0.44
RIPK3-202ENST00000554338 TMX4Q9H1E5 349 aaPredicted RBP17.78■□□□□ 0.44
RIPK3-202ENST00000554338 ELL2O00472 640 aaPredicted RBP17.77■□□□□ 0.44
RIPK3-202ENST00000554338 LMOD1P29536 600 aaPredicted RBP17.77■□□□□ 0.44
RIPK3-202ENST00000554338 EPS15P42566 896 aa17.77■□□□□ 0.44
RIPK3-202ENST00000554338 CALD1Q05682 793 aaKnown RBP17.77■□□□□ 0.44
RIPK3-202ENST00000554338 MPNDQ8N594 471 aa17.77■□□□□ 0.44
RIPK3-202ENST00000554338 SUPT20HQ8NEM7 779 aa17.77■□□□□ 0.44
RIPK3-202ENST00000554338 PHAXQ9H814 394 aaKnown RBP17.77■□□□□ 0.44
RIPK3-202ENST00000554338 TMEM88BA6NKF7 163 aa17.76■□□□□ 0.43
RIPK3-202ENST00000554338 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
RIPK3-202ENST00000554338 CNTROBQ8N137 903 aa17.76■□□□□ 0.43
RIPK3-202ENST00000554338 C8orf58Q8NAV2 365 aa17.76■□□□□ 0.43
RIPK3-202ENST00000554338 VPS33BQ9H267 617 aa17.76■□□□□ 0.43
RIPK3-202ENST00000554338 CXCL9Q07325 125 aa17.75■□□□□ 0.43
RIPK3-202ENST00000554338 GOLGA2Q08379 1002 aa17.75■□□□□ 0.43
RIPK3-202ENST00000554338 KIAA2012Q0VF49 1180 aa17.75■□□□□ 0.43
RIPK3-202ENST00000554338 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
RIPK3-202ENST00000554338 SF3B3Q15393 1217 aaKnown RBP17.75■□□□□ 0.43
RIPK3-202ENST00000554338 CELF1Q92879 486 aaKnown RBP17.75■□□□□ 0.43
RIPK3-202ENST00000554338 ZNRF3Q9ULT6 936 aa17.75■□□□□ 0.43
RIPK3-202ENST00000554338 IRS4O14654 1257 aaPredicted RBP17.74■□□□□ 0.43
RIPK3-202ENST00000554338 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
RIPK3-202ENST00000554338 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
RIPK3-202ENST00000554338 TSPYL6Q8N831 410 aa17.73■□□□□ 0.43
RIPK3-202ENST00000554338 MYD88Q99836 296 aa17.73■□□□□ 0.43
RIPK3-202ENST00000554338 GPRC5DQ9NZD1 345 aa17.73■□□□□ 0.43
RIPK3-202ENST00000554338 YDJCA8MPS7 323 aa17.72■□□□□ 0.43
RIPK3-202ENST00000554338 GMPSP49915 693 aaPredicted RBP17.72■□□□□ 0.43
RIPK3-202ENST00000554338 FMR1Q06787 632 aaKnown RBP eCLIP17.72■□□□□ 0.43
RIPK3-202ENST00000554338 USP50Q70EL3 339 aaPredicted RBP17.72■□□□□ 0.43
RIPK3-202ENST00000554338 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
RIPK3-202ENST00000554338 RAD17O75943 681 aa17.71■□□□□ 0.43
RIPK3-202ENST00000554338 VEGFBP49765 207 aa17.71■□□□□ 0.43
RIPK3-202ENST00000554338 CIAPIN1Q6FI81 312 aa17.71■□□□□ 0.43
RIPK3-202ENST00000554338 ZBTB38Q8NAP3 1195 aaPredicted RBP17.71■□□□□ 0.43
RIPK3-202ENST00000554338 ADARB2Q9NS39 739 aaKnown RBP17.7■□□□□ 0.42
RIPK3-202ENST00000554338 RASSF10A6NK89 507 aa17.69■□□□□ 0.42
RIPK3-202ENST00000554338 GPSM2P81274 684 aa17.69■□□□□ 0.42
RIPK3-202ENST00000554338 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
RIPK3-202ENST00000554338 CDHR2Q9BYE9 1310 aa17.69■□□□□ 0.42
RIPK3-202ENST00000554338 SHTN1A0MZ66 631 aa17.68■□□□□ 0.42
RIPK3-202ENST00000554338 TRAF5O00463 557 aa17.68■□□□□ 0.42
RIPK3-202ENST00000554338 CCDC27Q2M243 656 aa17.68■□□□□ 0.42
RIPK3-202ENST00000554338 CCDC191Q8NCU4 936 aa17.68■□□□□ 0.42
RIPK3-202ENST00000554338 JARID2Q92833 1246 aaPredicted RBP17.68■□□□□ 0.42
RIPK3-202ENST00000554338 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
RIPK3-202ENST00000554338 METTL22Q9BUU2 404 aaPredicted RBP17.68■□□□□ 0.42
RIPK3-202ENST00000554338 SEC31BQ9NQW1 1179 aa17.68■□□□□ 0.42
RIPK3-202ENST00000554338 CWC25Q9NXE8 425 aaPredicted RBP17.68■□□□□ 0.42
RIPK3-202ENST00000554338 POLLQ9UGP5 575 aa17.68■□□□□ 0.42
RIPK3-202ENST00000554338 NSFL1CQ9UNZ2 370 aaKnown RBP17.68■□□□□ 0.42
RIPK3-202ENST00000554338 PCCAP05165 728 aaPredicted RBP17.67■□□□□ 0.42
RIPK3-202ENST00000554338 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
RIPK3-202ENST00000554338 TRPM4Q8TD43 1214 aa17.67■□□□□ 0.42
RIPK3-202ENST00000554338 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
RIPK3-202ENST00000554338 DBNDD1Q9H9R9 158 aa17.67■□□□□ 0.42
RIPK3-202ENST00000554338 MAP3K2Q9Y2U5 619 aa17.67■□□□□ 0.42
RIPK3-202ENST00000554338 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
RIPK3-202ENST00000554338 RIMBP2O15034 1052 aa17.66■□□□□ 0.42
RIPK3-202ENST00000554338 FOXN1O15353 648 aa17.66■□□□□ 0.42
RIPK3-202ENST00000554338 DDX58O95786 925 aaKnown RBP17.66■□□□□ 0.42
RIPK3-202ENST00000554338 RPS8P62241 208 aaKnown RBP17.66■□□□□ 0.42
RIPK3-202ENST00000554338 TNIP1Q15025 636 aa17.66■□□□□ 0.42
RIPK3-202ENST00000554338 WASHC4Q2M389 1173 aa17.66■□□□□ 0.42
RIPK3-202ENST00000554338 TNS4Q8IZW8 715 aa17.66■□□□□ 0.42
RIPK3-202ENST00000554338 ABT1Q9ULW3 272 aaKnown RBP17.66■□□□□ 0.42
RIPK3-202ENST00000554338 THSD7BQ9C0I4 1608 aa17.65■□□□□ 0.42
RIPK3-202ENST00000554338 TRPM7Q96QT4 1865 aa17.65■□□□□ 0.42
RIPK3-202ENST00000554338 PSMD14O00487 310 aa17.65■□□□□ 0.42
RIPK3-202ENST00000554338 IGKV5-2P06315 115 aa17.65■□□□□ 0.42
RIPK3-202ENST00000554338 HIRAP54198 1017 aaPredicted RBP17.65■□□□□ 0.42
RIPK3-202ENST00000554338 DEFB115Q30KQ5 88 aa17.65■□□□□ 0.42
RIPK3-202ENST00000554338 TBC1D16Q8TBP0 767 aa17.65■□□□□ 0.42
RIPK3-202ENST00000554338 CCDC85AQ96PX6 553 aaPredicted RBP17.65■□□□□ 0.42
RIPK3-202ENST00000554338 MRS2Q9HD23 443 aa17.65■□□□□ 0.42
RIPK3-202ENST00000554338 ZBTB12Q9Y330 459 aaPredicted RBP17.65■□□□□ 0.42
RIPK3-202ENST00000554338 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
RIPK3-202ENST00000554338 PI4KAP2A4QPH2 592 aa17.64■□□□□ 0.41
RIPK3-202ENST00000554338 ECE2O60344 883 aa17.64■□□□□ 0.41
RIPK3-202ENST00000554338 PDE8AO60658 829 aa17.64■□□□□ 0.41
RIPK3-202ENST00000554338 HSP90B1P14625 803 aaKnown RBP17.64■□□□□ 0.41
RIPK3-202ENST00000554338 CCDC152Q4G0S7 254 aa17.64■□□□□ 0.41
RIPK3-202ENST00000554338 CST9Q5W186 159 aa17.64■□□□□ 0.41
RIPK3-202ENST00000554338 PI4KAP1Q8N8J0 262 aa17.64■□□□□ 0.41
RIPK3-202ENST00000554338 GLIS2Q9BZE0 524 aaPredicted RBP17.64■□□□□ 0.41
RIPK3-202ENST00000554338 SCN9AQ15858 1988 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 DOK7Q18PE1 504 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 TWISTNBQ3B726 338 aaPredicted RBP17.63■□□□□ 0.41
RIPK3-202ENST00000554338 KSR2Q6VAB6 950 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 G2E3Q7L622 706 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 MICALL2Q8IY33 904 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 EYA3Q99504 573 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 CHMP4AQ9BY43 222 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 KCNQ5Q9NR82 932 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 PODXL2Q9NZ53 605 aa17.63■□□□□ 0.41
RIPK3-202ENST00000554338 PGAP2Q9UHJ9 254 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms