RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CASP7P55210 303 aa24.7■■□□□ 1.54
PTCH1-227ENST00000553256 GRIPAP1Q4V328 841 aa24.7■■□□□ 1.54
PTCH1-227ENST00000553256 SP8Q8IXZ3 490 aa24.7■■□□□ 1.54
PTCH1-227ENST00000553256 H7C1W4 665 aa24.69■■□□□ 1.54
PTCH1-227ENST00000553256 DNAAF4Q8WXU2 420 aa24.69■■□□□ 1.54
PTCH1-227ENST00000553256 JARID2Q92833 1246 aaPredicted RBP24.69■■□□□ 1.54
PTCH1-227ENST00000553256 CELF1Q92879 486 aaKnown RBP24.69■■□□□ 1.54
PTCH1-227ENST00000553256 RTFDC1Q9BY42 306 aaPredicted RBP24.69■■□□□ 1.54
PTCH1-227ENST00000553256 FKBP5Q13451 457 aaPredicted RBP24.68■■□□□ 1.54
PTCH1-227ENST00000553256 DDX46Q7L014 1031 aaKnown RBP24.68■■□□□ 1.54
PTCH1-227ENST00000553256 DUOX1Q9NRD9 1551 aa24.67■■□□□ 1.54
PTCH1-227ENST00000553256 KDM2BQ8NHM5 1336 aa24.67■■□□□ 1.54
PTCH1-227ENST00000553256 WDR90Q96KV7 1748 aa24.67■■□□□ 1.54
PTCH1-227ENST00000553256 IARSP41252 1262 aaKnown RBP24.67■■□□□ 1.54
PTCH1-227ENST00000553256 GCKRQ14397 625 aa24.67■■□□□ 1.54
PTCH1-227ENST00000553256 FZD9O00144 591 aa24.66■■□□□ 1.54
PTCH1-227ENST00000553256 PDE8AO60658 829 aa24.66■■□□□ 1.54
PTCH1-227ENST00000553256 BEND3Q5T5X7 828 aa24.66■■□□□ 1.54
PTCH1-227ENST00000553256 MRPL50Q8N5N7 158 aaKnown RBP24.66■■□□□ 1.54
PTCH1-227ENST00000553256 LINS1Q8NG48 757 aa24.66■■□□□ 1.54
PTCH1-227ENST00000553256 F6X3S4 739 aa24.65■■□□□ 1.54
PTCH1-227ENST00000553256 LTBP1Q14766 1721 aa24.65■■□□□ 1.54
PTCH1-227ENST00000553256 NEXNQ0ZGT2 675 aa24.64■■□□□ 1.54
PTCH1-227ENST00000553256 TMC4Q7Z404 712 aa24.64■■□□□ 1.54
PTCH1-227ENST00000553256 PLA2G12BQ9BX93 195 aa24.64■■□□□ 1.54
PTCH1-227ENST00000553256 RRAGCQ9HB90 399 aa24.64■■□□□ 1.54
PTCH1-227ENST00000553256 SEC31BQ9NQW1 1179 aa24.64■■□□□ 1.54
PTCH1-227ENST00000553256 ZNF541Q9H0D2 1346 aa24.62■■□□□ 1.53
PTCH1-227ENST00000553256 TTLL11Q8NHH1 800 aa24.62■■□□□ 1.53
PTCH1-227ENST00000553256 SSH1Q8WYL5 1049 aa24.62■■□□□ 1.53
PTCH1-227ENST00000553256 RTL9Q8NET4 1388 aa24.62■■□□□ 1.53
PTCH1-227ENST00000553256 TOMM70O94826 608 aa24.61■■□□□ 1.53
PTCH1-227ENST00000553256 DDNO94850 711 aaPredicted RBP24.61■■□□□ 1.53
PTCH1-227ENST00000553256 HSP90B1P14625 803 aaKnown RBP24.61■■□□□ 1.53
PTCH1-227ENST00000553256 L3MBTL3Q96JM7 780 aaPredicted RBP24.61■■□□□ 1.53
PTCH1-227ENST00000553256 VPS33BQ9H267 617 aa24.61■■□□□ 1.53
PTCH1-227ENST00000553256 CEP350Q5VT06 3117 aa24.6■■□□□ 1.53
PTCH1-227ENST00000553256 CTSWP56202 376 aa24.6■■□□□ 1.53
PTCH1-227ENST00000553256 RPS8P62241 208 aaKnown RBP24.6■■□□□ 1.53
PTCH1-227ENST00000553256 CCDC152Q4G0S7 254 aa24.59■■□□□ 1.53
PTCH1-227ENST00000553256 UBE3BQ7Z3V4 1068 aa24.59■■□□□ 1.53
PTCH1-227ENST00000553256 MPNDQ8N594 471 aa24.59■■□□□ 1.53
PTCH1-227ENST00000553256 CSF1RP07333 972 aa24.58■■□□□ 1.53
PTCH1-227ENST00000553256 DPY19L2Q6NUT2 758 aa24.58■■□□□ 1.53
PTCH1-227ENST00000553256 RBM46Q8TBY0 533 aaKnown RBP24.58■■□□□ 1.53
PTCH1-227ENST00000553256 VEGFAP15692 232 aaPredicted RBP24.57■■□□□ 1.52
PTCH1-227ENST00000553256 ALDH1L2Q3SY69 923 aa24.57■■□□□ 1.52
PTCH1-227ENST00000553256 CT47B1P0C2W7 299 aaPredicted RBP24.56■■□□□ 1.52
PTCH1-227ENST00000553256 BRPF1P55201 1214 aaPredicted RBP24.56■■□□□ 1.52
PTCH1-227ENST00000553256 GPSM2P81274 684 aa24.56■■□□□ 1.52
PTCH1-227ENST00000553256 KIAA2012Q0VF49 1180 aa24.56■■□□□ 1.52
PTCH1-227ENST00000553256 DPP8Q6V1X1 898 aaPredicted RBP24.56■■□□□ 1.52
PTCH1-227ENST00000553256 GREM2Q9H772 168 aa24.56■■□□□ 1.52
PTCH1-227ENST00000553256 PODXL2Q9NZ53 605 aa24.56■■□□□ 1.52
PTCH1-227ENST00000553256 POLLQ9UGP5 575 aa24.56■■□□□ 1.52
PTCH1-227ENST00000553256 AOC3Q16853 763 aa24.55■■□□□ 1.52
PTCH1-227ENST00000553256 CCDC85AQ96PX6 553 aaPredicted RBP24.55■■□□□ 1.52
PTCH1-227ENST00000553256 MYH3P11055 1940 aa24.55■■□□□ 1.52
PTCH1-227ENST00000553256 FOXO4P98177 505 aa24.54■■□□□ 1.52
PTCH1-227ENST00000553256 LARGE2Q8N3Y3 721 aa24.54■■□□□ 1.52
PTCH1-227ENST00000553256 SUPT20HQ8NEM7 779 aa24.54■■□□□ 1.52
PTCH1-227ENST00000553256 PTPRCP08575 1304 aa24.54■■□□□ 1.52
PTCH1-227ENST00000553256 PPIP5K2O43314 1243 aa24.53■■□□□ 1.52
PTCH1-227ENST00000553256 ALDH1L1O75891 902 aa24.53■■□□□ 1.52
PTCH1-227ENST00000553256 UTYO14607 1347 aa24.53■■□□□ 1.52
PTCH1-227ENST00000553256 EPHA10Q5JZY3 1008 aa24.52■■□□□ 1.52
PTCH1-227ENST00000553256 GPC2Q8N158 579 aa24.52■■□□□ 1.52
PTCH1-227ENST00000553256 JDP2Q8WYK2 163 aa24.52■■□□□ 1.52
PTCH1-227ENST00000553256 KAZALD1Q96I82 304 aa24.52■■□□□ 1.52
PTCH1-227ENST00000553256 GRM8O00222 908 aa24.51■■□□□ 1.51
PTCH1-227ENST00000553256 TBC1D16Q8TBP0 767 aa24.51■■□□□ 1.51
PTCH1-227ENST00000553256 BCL2L13Q9BXK5 485 aa24.51■■□□□ 1.51
PTCH1-227ENST00000553256 TMX4Q9H1E5 349 aaPredicted RBP24.51■■□□□ 1.51
PTCH1-227ENST00000553256 YDJCA8MPS7 323 aa24.5■■□□□ 1.51
PTCH1-227ENST00000553256 HSPA6P17066 643 aa24.5■■□□□ 1.51
PTCH1-227ENST00000553256 BSDC1Q9NW68 430 aaPredicted RBP24.5■■□□□ 1.51
PTCH1-227ENST00000553256 NSFL1CQ9UNZ2 370 aaKnown RBP24.5■■□□□ 1.51
PTCH1-227ENST00000553256 SCN4AP35499 1836 aa24.49■■□□□ 1.51
PTCH1-227ENST00000553256 FSTL1Q12841 308 aa24.49■■□□□ 1.51
PTCH1-227ENST00000553256 FAM161AQ3B820 660 aa24.49■■□□□ 1.51
PTCH1-227ENST00000553256 SRCIN1Q9C0H9 1055 aa24.49■■□□□ 1.51
PTCH1-227ENST00000553256 TAF1DQ9H5J8 278 aaPredicted RBP24.49■■□□□ 1.51
PTCH1-227ENST00000553256 ZNRF3Q9ULT6 936 aa24.49■■□□□ 1.51
PTCH1-227ENST00000553256 ADAMTSL1Q8N6G6 1762 aa24.49■■□□□ 1.51
PTCH1-227ENST00000553256 POTEIP0CG38 1075 aa24.48■■□□□ 1.51
PTCH1-227ENST00000553256 POTEJP0CG39 1038 aa24.48■■□□□ 1.51
PTCH1-227ENST00000553256 RARSP54136 660 aaKnown RBP24.48■■□□□ 1.51
PTCH1-227ENST00000553256 CXCL9Q07325 125 aa24.48■■□□□ 1.51
PTCH1-227ENST00000553256 ANKRD18AQ8IVF6 992 aa24.48■■□□□ 1.51
PTCH1-227ENST00000553256 NIM1KQ8IY84 436 aa24.48■■□□□ 1.51
PTCH1-227ENST00000553256 CDC5LQ99459 802 aaKnown RBP24.48■■□□□ 1.51
PTCH1-227ENST00000553256 WTIPA6NIX2 430 aaPredicted RBP24.47■■□□□ 1.51
PTCH1-227ENST00000553256 NBPF7P0C2Y1 421 aaPredicted RBP24.47■■□□□ 1.51
PTCH1-227ENST00000553256 SCNN1DP51172 638 aa24.47■■□□□ 1.51
PTCH1-227ENST00000553256 MINPP1Q9UNW1 487 aa24.47■■□□□ 1.51
PTCH1-227ENST00000553256 ITGA6P23229 1130 aa24.46■■□□□ 1.51
PTCH1-227ENST00000553256 EIF6P56537 245 aaKnown RBP24.46■■□□□ 1.51
PTCH1-227ENST00000553256 SLC4A10Q6U841 1118 aa24.46■■□□□ 1.51
PTCH1-227ENST00000553256 GPR101Q96P66 508 aaPredicted RBP24.46■■□□□ 1.51
PTCH1-227ENST00000553256 IQCA1LA6NCM1 817 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms