RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 DUSP27Q5VZP5 1158 aa12.91□□□□□ -0.34
LINC00661-207ENST00000552685 DDX46Q7L014 1031 aaKnown RBP12.91□□□□□ -0.34
LINC00661-207ENST00000552685 SP8Q8IXZ3 490 aa12.91□□□□□ -0.34
LINC00661-207ENST00000552685 MPNDQ8N594 471 aa12.91□□□□□ -0.34
LINC00661-207ENST00000552685 GRAPLQ8TC17 118 aaPredicted RBP12.91□□□□□ -0.34
LINC00661-207ENST00000552685 FAM89AQ96GI7 184 aa12.91□□□□□ -0.34
LINC00661-207ENST00000552685 MBIPQ9NS73 344 aa12.91□□□□□ -0.34
LINC00661-207ENST00000552685 ABT1Q9ULW3 272 aaKnown RBP12.91□□□□□ -0.34
LINC00661-207ENST00000552685 RAD17O75943 681 aa12.9□□□□□ -0.34
LINC00661-207ENST00000552685 GMPSP49915 693 aaPredicted RBP12.9□□□□□ -0.34
LINC00661-207ENST00000552685 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
LINC00661-207ENST00000552685 PLBD2Q8NHP8 589 aa12.9□□□□□ -0.34
LINC00661-207ENST00000552685 ISCA1Q9BUE6 129 aa12.9□□□□□ -0.34
LINC00661-207ENST00000552685 RTFDC1Q9BY42 306 aaPredicted RBP12.9□□□□□ -0.34
LINC00661-207ENST00000552685 ZNRF3Q9ULT6 936 aa12.9□□□□□ -0.34
LINC00661-207ENST00000552685 SHTN1A0MZ66 631 aa12.89□□□□□ -0.35
LINC00661-207ENST00000552685 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
LINC00661-207ENST00000552685 APAF1O14727 1248 aa12.89□□□□□ -0.35
LINC00661-207ENST00000552685 CTCFP49711 727 aaPredicted RBP12.89□□□□□ -0.35
LINC00661-207ENST00000552685 DEFB115Q30KQ5 88 aa12.89□□□□□ -0.35
LINC00661-207ENST00000552685 CST9Q5W186 159 aa12.89□□□□□ -0.35
LINC00661-207ENST00000552685 SUPT20HQ8NEM7 779 aa12.89□□□□□ -0.35
LINC00661-207ENST00000552685 CELF1Q92879 486 aaKnown RBP12.89□□□□□ -0.35
LINC00661-207ENST00000552685 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
LINC00661-207ENST00000552685 PRKRIP1Q9H875 184 aaPredicted RBP12.89□□□□□ -0.35
LINC00661-207ENST00000552685 GPRC5DQ9NZD1 345 aa12.89□□□□□ -0.35
LINC00661-207ENST00000552685 DBF4Q9UBU7 674 aaPredicted RBP12.89□□□□□ -0.35
LINC00661-207ENST00000552685 DUOX1Q9NRD9 1551 aa12.89□□□□□ -0.35
LINC00661-207ENST00000552685 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
LINC00661-207ENST00000552685 YDJCA8MPS7 323 aa12.88□□□□□ -0.35
LINC00661-207ENST00000552685 HOXB7P09629 217 aa12.88□□□□□ -0.35
LINC00661-207ENST00000552685 KIAA2012Q0VF49 1180 aa12.88□□□□□ -0.35
LINC00661-207ENST00000552685 GRM1Q13255 1194 aa12.88□□□□□ -0.35
LINC00661-207ENST00000552685 USP50Q70EL3 339 aaPredicted RBP12.88□□□□□ -0.35
LINC00661-207ENST00000552685 JARID2Q92833 1246 aaPredicted RBP12.88□□□□□ -0.35
LINC00661-207ENST00000552685 AIDAQ96BJ3 306 aa12.88□□□□□ -0.35
LINC00661-207ENST00000552685 GPR101Q96P66 508 aaPredicted RBP12.88□□□□□ -0.35
LINC00661-207ENST00000552685 PHAXQ9H814 394 aaKnown RBP12.88□□□□□ -0.35
LINC00661-207ENST00000552685 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
LINC00661-207ENST00000552685 ZNF853P0CG23 659 aa12.87□□□□□ -0.35
LINC00661-207ENST00000552685 CIAPIN1Q6FI81 312 aa12.87□□□□□ -0.35
LINC00661-207ENST00000552685 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
LINC00661-207ENST00000552685 BCL2L13Q9BXK5 485 aa12.87□□□□□ -0.35
LINC00661-207ENST00000552685 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
LINC00661-207ENST00000552685 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
LINC00661-207ENST00000552685 HYPKQ9NX55 129 aa12.87□□□□□ -0.35
LINC00661-207ENST00000552685 LRRC37AA6NMS7 1700 aa12.86□□□□□ -0.35
LINC00661-207ENST00000552685 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
LINC00661-207ENST00000552685 GPSM2P81274 684 aa12.86□□□□□ -0.35
LINC00661-207ENST00000552685 CYP4F22Q6NT55 531 aa12.86□□□□□ -0.35
LINC00661-207ENST00000552685 RIC3Q7Z5B4 369 aa12.86□□□□□ -0.35
LINC00661-207ENST00000552685 C8orf58Q8NAV2 365 aa12.86□□□□□ -0.35
LINC00661-207ENST00000552685 TRPM4Q8TD43 1214 aa12.86□□□□□ -0.35
LINC00661-207ENST00000552685 ABHD8Q96I13 439 aa12.86□□□□□ -0.35
LINC00661-207ENST00000552685 GLIS2Q9BZE0 524 aaPredicted RBP12.86□□□□□ -0.35
LINC00661-207ENST00000552685 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
LINC00661-207ENST00000552685 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
LINC00661-207ENST00000552685 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
LINC00661-207ENST00000552685 IRS4O14654 1257 aaPredicted RBP12.85□□□□□ -0.35
LINC00661-207ENST00000552685 SF3B3Q15393 1217 aaKnown RBP12.85□□□□□ -0.35
LINC00661-207ENST00000552685 DLK2Q6UY11 383 aa12.85□□□□□ -0.35
LINC00661-207ENST00000552685 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
LINC00661-207ENST00000552685 CCDC85AQ96PX6 553 aaPredicted RBP12.85□□□□□ -0.35
LINC00661-207ENST00000552685 MYD88Q99836 296 aa12.85□□□□□ -0.35
LINC00661-207ENST00000552685 DBNDD1Q9H9R9 158 aa12.85□□□□□ -0.35
LINC00661-207ENST00000552685 KCNQ5Q9NR82 932 aa12.85□□□□□ -0.35
LINC00661-207ENST00000552685 IFT57Q9NWB7 429 aa12.85□□□□□ -0.35
LINC00661-207ENST00000552685 POLLQ9UGP5 575 aa12.85□□□□□ -0.35
LINC00661-207ENST00000552685 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
LINC00661-207ENST00000552685 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
LINC00661-207ENST00000552685 TNIP1Q15025 636 aa12.84□□□□□ -0.35
LINC00661-207ENST00000552685 DOK7Q18PE1 504 aa12.84□□□□□ -0.35
LINC00661-207ENST00000552685 CCDC184Q52MB2 194 aa12.84□□□□□ -0.35
LINC00661-207ENST00000552685 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
LINC00661-207ENST00000552685 CNOT7Q9UIV1 285 aaKnown RBP12.84□□□□□ -0.35
LINC00661-207ENST00000552685 TSKSQ9UJT2 592 aa12.84□□□□□ -0.35
LINC00661-207ENST00000552685 PSMD14O00487 310 aa12.83□□□□□ -0.36
LINC00661-207ENST00000552685 AOC2O75106 756 aa12.83□□□□□ -0.36
LINC00661-207ENST00000552685 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
LINC00661-207ENST00000552685 GNAI1P63096 354 aa12.83□□□□□ -0.36
LINC00661-207ENST00000552685 TRIM28Q13263 835 aaKnown RBP12.83□□□□□ -0.36
LINC00661-207ENST00000552685 WASHC4Q2M389 1173 aa12.83□□□□□ -0.36
LINC00661-207ENST00000552685 TMC4Q7Z404 712 aa12.83□□□□□ -0.36
LINC00661-207ENST00000552685 MICALL2Q8IY33 904 aa12.83□□□□□ -0.36
LINC00661-207ENST00000552685 ZNF408Q9H9D4 720 aa12.83□□□□□ -0.36
LINC00661-207ENST00000552685 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
LINC00661-207ENST00000552685 ECE2O60344 883 aa12.82□□□□□ -0.36
LINC00661-207ENST00000552685 EGFRP00533 1210 aa12.82□□□□□ -0.36
LINC00661-207ENST00000552685 RPS8P62241 208 aaKnown RBP12.82□□□□□ -0.36
LINC00661-207ENST00000552685 FAM161AQ3B820 660 aa12.82□□□□□ -0.36
LINC00661-207ENST00000552685 SAMD7Q7Z3H4 446 aa12.82□□□□□ -0.36
LINC00661-207ENST00000552685 TSPYL6Q8N831 410 aa12.82□□□□□ -0.36
LINC00661-207ENST00000552685 TSR2Q969E8 191 aaKnown RBP12.82□□□□□ -0.36
LINC00661-207ENST00000552685 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
LINC00661-207ENST00000552685 TNRC18O15417 2968 aaPredicted RBP12.81□□□□□ -0.36
LINC00661-207ENST00000552685 TBC1D10BQ4KMP7 808 aaPredicted RBP12.81□□□□□ -0.36
LINC00661-207ENST00000552685 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
LINC00661-207ENST00000552685 USP48Q86UV5 1035 aa12.81□□□□□ -0.36
LINC00661-207ENST00000552685 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
LINC00661-207ENST00000552685 TBC1D16Q8TBP0 767 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms