RNA–Protein interactions for RNA: ENST00000551317.5

EFCAB2-216, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 3

Gene EFCAB2, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-216ENST00000551317 GNPATO15228 680 aa9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 HSP90B1P14625 803 aaKnown RBP9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 SSFA2P28290 1259 aa9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 FOXO4P98177 505 aa9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 SKAP1Q86WV1 359 aa9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 OSBPL3Q9H4L5 887 aa9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 COPRSQ9NQ92 184 aa9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 LRRC4BQ9NT99 713 aa9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 TBC1D2BQ9UPU7 963 aa9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 EXOC6BQ9Y2D4 811 aa9.54□□□□□ -0.88
EFCAB2-216ENST00000551317 RFX5P48382 616 aaPredicted RBP9.53□□□□□ -0.88
EFCAB2-216ENST00000551317 FAM161AQ3B820 660 aa9.53□□□□□ -0.88
EFCAB2-216ENST00000551317 BMP2KLQ5H9B9 411 aa9.53□□□□□ -0.88
EFCAB2-216ENST00000551317 EPHA10Q5JZY3 1008 aa9.53□□□□□ -0.88
EFCAB2-216ENST00000551317 KCNV2Q8TDN2 545 aa9.53□□□□□ -0.88
EFCAB2-216ENST00000551317 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
EFCAB2-216ENST00000551317 CARMIL3Q8ND23 1372 aa9.52□□□□□ -0.88
EFCAB2-216ENST00000551317 ZNF609O15014 1411 aa9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 SURF6O75683 361 aaKnown RBP9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 NTSR2O95665 410 aa9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 CSF1RP07333 972 aa9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 GPTP24298 496 aa9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 TXNRD1Q16881 649 aa9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 C8orf34Q49A92 452 aa9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 RHPN1Q8TCX5 695 aa9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 SP7Q8TDD2 431 aaPredicted RBP9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
EFCAB2-216ENST00000551317 PDE8AO60658 829 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 CIAO1O76071 339 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 CTSWP56202 376 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 KCNQ4P56696 695 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 PTPN12Q05209 780 aaKnown RBP9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 LMBR1LQ6UX01 489 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 PLEKHM2Q8IWE5 1019 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 UTP14AQ9BVJ6 771 aaKnown RBP9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 BACH2Q9BYV9 841 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 NYXQ9GZU5 481 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 TRMT112Q9UI30 125 aaKnown RBP9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 NIP7Q9Y221 180 aaKnown RBP eCLIP9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 ANKRD31Q8N7Z5 1873 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 LRRC37AA6NMS7 1700 aa9.51□□□□□ -0.89
EFCAB2-216ENST00000551317 IRS4O14654 1257 aaPredicted RBP9.5□□□□□ -0.89
EFCAB2-216ENST00000551317 ZPR1O75312 459 aa9.5□□□□□ -0.89
EFCAB2-216ENST00000551317 SUSD4Q5VX71 490 aa9.5□□□□□ -0.89
EFCAB2-216ENST00000551317 FAM89AQ96GI7 184 aa9.5□□□□□ -0.89
EFCAB2-216ENST00000551317 STAP2Q9UGK3 403 aa9.5□□□□□ -0.89
EFCAB2-216ENST00000551317 ABCC12Q96J65 1359 aa9.5□□□□□ -0.89
EFCAB2-216ENST00000551317 MYH7P12883 1935 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 APBB1O00213 710 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 SMARCA5O60264 1052 aaPredicted RBP9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 APBA3O96018 575 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 MX1P20591 662 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 RFC4P35249 363 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 PDE1AP54750 535 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 G3BP1Q13283 466 aaKnown RBP eCLIP9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 OS9Q13438 667 aaPredicted RBP9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 TRAPPC3LQ5T215 181 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 TTC22Q5TAA0 569 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 USPL1Q5W0Q7 1092 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 AMIGO3Q86WK7 504 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 CLASRPQ8N2M8 674 aaKnown RBP9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 FLAD1Q8NFF5 587 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 ARHGEF1Q92888 912 aaKnown RBP9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 AKT1S1Q96B36 256 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 GPR108Q9NPR9 543 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 PA2G4Q9UQ80 394 aaKnown RBP9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 TTC41PQ6P2S7 1318 aa9.49□□□□□ -0.89
EFCAB2-216ENST00000551317 DLEC1Q9Y238 1755 aa9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 SASH1O94885 1247 aa9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 GSPT1P15170 499 aaKnown RBP9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 IL15P40933 162 aaPredicted RBP9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 CCDC57Q2TAC2 916 aa9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 TBC1D9BQ66K14 1250 aa9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 KCTD17Q8N5Z5 321 aa9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 TTLL11Q8NHH1 800 aa9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 JARID2Q92833 1246 aaPredicted RBP9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 SRP68Q9UHB9 627 aaKnown RBP9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 MYH13Q9UKX3 1938 aa9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 COL11A2P13942 1736 aaPredicted RBP9.48□□□□□ -0.89
EFCAB2-216ENST00000551317 DOCK2Q92608 1830 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 EYA2O00167 538 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 IFIT5Q13325 482 aaKnown RBP9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 ZNF827Q17R98 1081 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 CCDC152Q4G0S7 254 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 RTL5Q5HYW3 569 aaPredicted RBP9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 SLC10A5Q5PT55 438 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 OTUD7AQ8TE49 926 aaPredicted RBP9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 GPATCH3Q96I76 525 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 SETDB2Q96T68 719 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 IL1RAPL2Q9NP60 686 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 CHMP3Q9Y3E7 222 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 COL4A1P02462 1669 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 RFX7Q2KHR2 1363 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 TAF1P21675 1872 aa9.47□□□□□ -0.89
EFCAB2-216ENST00000551317 LTBP1Q14766 1721 aa9.46□□□□□ -0.89
EFCAB2-216ENST00000551317 ANKRD18BA2A2Z9 1011 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 IGSF3O75054 1194 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 PHF14O94880 888 aa9.46□□□□□ -0.9
EFCAB2-216ENST00000551317 GYS1P13807 737 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms