RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 FMR1Q06787 632 aaKnown RBP eCLIP24.27■■□□□ 1.483e-10■■□□□ 11.6
CHERP-204ENST00000546538 NIM1KQ8IY84 436 aa24.27■■□□□ 1.48
CHERP-204ENST00000546538 PHAXQ9H814 394 aaKnown RBP24.27■■□□□ 1.48
CHERP-204ENST00000546538 HYPKQ9NX55 129 aa24.27■■□□□ 1.48
CHERP-204ENST00000546538 ELL2O00472 640 aaPredicted RBP24.26■■□□□ 1.47
CHERP-204ENST00000546538 CXCL9Q07325 125 aa24.26■■□□□ 1.47
CHERP-204ENST00000546538 DDX46Q7L014 1031 aaKnown RBP24.26■■□□□ 1.47
CHERP-204ENST00000546538 C8orf58Q8NAV2 365 aa24.26■■□□□ 1.47
CHERP-204ENST00000546538 TMEM88BA6NKF7 163 aa24.25■■□□□ 1.47
CHERP-204ENST00000546538 DPP8Q6V1X1 898 aaPredicted RBP24.25■■□□□ 1.47
CHERP-204ENST00000546538 CELF1Q92879 486 aaKnown RBP24.25■■□□□ 1.47
CHERP-204ENST00000546538 KIAA2012Q0VF49 1180 aa24.24■■□□□ 1.47
CHERP-204ENST00000546538 RTL5Q5HYW3 569 aaPredicted RBP24.24■■□□□ 1.47
CHERP-204ENST00000546538 MPNDQ8N594 471 aa24.24■■□□□ 1.47
CHERP-204ENST00000546538 VPS33BQ9H267 617 aa24.24■■□□□ 1.47
CHERP-204ENST00000546538 TRIM28Q13263 835 aaKnown RBP24.23■■□□□ 1.47
CHERP-204ENST00000546538 SF3B3Q15393 1217 aaKnown RBP24.23■■□□□ 1.47
CHERP-204ENST00000546538 ZNRF3Q9ULT6 936 aa24.23■■□□□ 1.47
CHERP-204ENST00000546538 VEGFBP49765 207 aa24.22■■□□□ 1.47
CHERP-204ENST00000546538 GNAI1P63096 354 aa24.22■■□□□ 1.47
CHERP-204ENST00000546538 YDJCA8MPS7 323 aa24.21■■□□□ 1.47
CHERP-204ENST00000546538 LMOD1P29536 600 aaPredicted RBP24.21■■□□□ 1.47
CHERP-204ENST00000546538 TSPYL6Q8N831 410 aa24.21■■□□□ 1.47
CHERP-204ENST00000546538 GPRC5DQ9NZD1 345 aa24.21■■□□□ 1.47
CHERP-204ENST00000546538 SUPT20HQ8NEM7 779 aa24.2■■□□□ 1.46
CHERP-204ENST00000546538 TMX4Q9H1E5 349 aaPredicted RBP24.2■■□□□ 1.46
CHERP-204ENST00000546538 GMPSP49915 693 aaPredicted RBP24.19■■□□□ 1.46
CHERP-204ENST00000546538 SHTN1A0MZ66 631 aa24.18■■□□□ 1.46
CHERP-204ENST00000546538 IRS4O14654 1257 aaPredicted RBP24.18■■□□□ 1.46
CHERP-204ENST00000546538 USP50Q70EL3 339 aaPredicted RBP24.18■■□□□ 1.46
CHERP-204ENST00000546538 RASSF10A6NK89 507 aa24.18■■□□□ 1.46
CHERP-204ENST00000546538 TRAF5O00463 557 aa24.18■■□□□ 1.46
CHERP-204ENST00000546538 RAD17O75943 681 aa24.18■■□□□ 1.46
CHERP-204ENST00000546538 RIC3Q7Z5B4 369 aa24.18■■□□□ 1.46
CHERP-204ENST00000546538 TMC4Q7Z404 712 aa24.17■■□□□ 1.46
CHERP-204ENST00000546538 JARID2Q92833 1246 aaPredicted RBP24.17■■□□□ 1.46
CHERP-204ENST00000546538 MYD88Q99836 296 aa24.17■■□□□ 1.46
CHERP-204ENST00000546538 POLLQ9UGP5 575 aa24.17■■□□□ 1.46
CHERP-204ENST00000546538 FOXN1O15353 648 aa24.16■■□□□ 1.46
CHERP-204ENST00000546538 GPSM2P81274 684 aa24.16■■□□□ 1.46
CHERP-204ENST00000546538 CALD1Q05682 793 aaKnown RBP24.16■■□□□ 1.46
CHERP-204ENST00000546538 GOLGA2Q08379 1002 aa24.16■■□□□ 1.46
CHERP-204ENST00000546538 CST9Q5W186 159 aa24.16■■□□□ 1.46
CHERP-204ENST00000546538 CIAPIN1Q6FI81 312 aa24.16■■□□□ 1.46
CHERP-204ENST00000546538 ZBTB38Q8NAP3 1195 aaPredicted RBP24.16■■□□□ 1.46
CHERP-204ENST00000546538 TSR2Q969E8 191 aaKnown RBP24.16■■□□□ 1.46
CHERP-204ENST00000546538 SEC31BQ9NQW1 1179 aa24.16■■□□□ 1.46
CHERP-204ENST00000546538 ADARB2Q9NS39 739 aaKnown RBP24.16■■□□□ 1.46
CHERP-204ENST00000546538 HIRAP54198 1017 aaPredicted RBP24.15■■□□□ 1.46
CHERP-204ENST00000546538 GPR101Q96P66 508 aaPredicted RBP24.15■■□□□ 1.46
CHERP-204ENST00000546538 TNS4Q8IZW8 715 aa24.14■■□□□ 1.45
CHERP-204ENST00000546538 NSFL1CQ9UNZ2 370 aaKnown RBP24.14■■□□□ 1.45
CHERP-204ENST00000546538 TRPM7Q96QT4 1865 aa24.14■■□□□ 1.45
CHERP-204ENST00000546538 TRPM4Q8TD43 1214 aa24.13■■□□□ 1.45
CHERP-204ENST00000546538 KCNQ5Q9NR82 932 aa24.13■■□□□ 1.45
CHERP-204ENST00000546538 METTL22Q9BUU2 404 aaPredicted RBP24.12■■□□□ 1.45
CHERP-204ENST00000546538 DBNDD1Q9H9R9 158 aa24.12■■□□□ 1.45
CHERP-204ENST00000546538 SCN9AQ15858 1988 aa24.12■■□□□ 1.45
CHERP-204ENST00000546538 RPS8P62241 208 aaKnown RBP24.11■■□□□ 1.45
CHERP-204ENST00000546538 DEFB115Q30KQ5 88 aa24.11■■□□□ 1.45
CHERP-204ENST00000546538 WWC1Q8IX03 1113 aa24.11■■□□□ 1.45
CHERP-204ENST00000546538 CCDC191Q8NCU4 936 aa24.11■■□□□ 1.45
CHERP-204ENST00000546538 PGAP2Q9UHJ9 254 aa24.11■■□□□ 1.45
CHERP-204ENST00000546538 ZBTB12Q9Y330 459 aaPredicted RBP24.11■■□□□ 1.45
CHERP-204ENST00000546538 THSD7BQ9C0I4 1608 aa24.11■■□□□ 1.45
CHERP-204ENST00000546538 CDHR2Q9BYE9 1310 aa24.11■■□□□ 1.45
CHERP-204ENST00000546538 RIMBP2O15034 1052 aa24.1■■□□□ 1.45
CHERP-204ENST00000546538 PCCAP05165 728 aaPredicted RBP24.1■■□□□ 1.45
CHERP-204ENST00000546538 WASHC4Q2M389 1173 aa24.1■■□□□ 1.45
CHERP-204ENST00000546538 WBP1LQ9NX94 342 aa24.1■■□□□ 1.45
CHERP-204ENST00000546538 RTL9Q8NET4 1388 aa24.1■■□□□ 1.45
CHERP-204ENST00000546538 IGKV5-2P06315 115 aa24.1■■□□□ 1.45
CHERP-204ENST00000546538 CCDC27Q2M243 656 aa24.1■■□□□ 1.45
CHERP-204ENST00000546538 CCDC30Q5VVM6 783 aa24.1■■□□□ 1.45
CHERP-204ENST00000546538 TBC1D16Q8TBP0 767 aa24.1■■□□□ 1.45
CHERP-204ENST00000546538 GLIS2Q9BZE0 524 aaPredicted RBP24.1■■□□□ 1.45
CHERP-204ENST00000546538 ABT1Q9ULW3 272 aaKnown RBP24.1■■□□□ 1.45
CHERP-204ENST00000546538 MAP3K2Q9Y2U5 619 aa24.1■■□□□ 1.45
CHERP-204ENST00000546538 PSMD14O00487 310 aa24.09■■□□□ 1.45
CHERP-204ENST00000546538 TNIP1Q15025 636 aa24.09■■□□□ 1.45
CHERP-204ENST00000546538 G2E3Q7L622 706 aa24.09■■□□□ 1.45
CHERP-204ENST00000546538 BCL2L13Q9BXK5 485 aa24.09■■□□□ 1.45
CHERP-204ENST00000546538 CWC25Q9NXE8 425 aaPredicted RBP24.09■■□□□ 1.45
CHERP-204ENST00000546538 CNOT7Q9UIV1 285 aaKnown RBP24.09■■□□□ 1.45
CHERP-204ENST00000546538 WDR33Q9C0J8 1336 aaKnown RBP24.08■■□□□ 1.45
CHERP-204ENST00000546538 C6orf229H3BNL8 230 aa24.08■■□□□ 1.44
CHERP-204ENST00000546538 EGFRP00533 1210 aa24.08■■□□□ 1.44
CHERP-204ENST00000546538 DOK7Q18PE1 504 aa24.08■■□□□ 1.44
CHERP-204ENST00000546538 CCDC85AQ96PX6 553 aaPredicted RBP24.08■■□□□ 1.44
CHERP-204ENST00000546538 PI4KAP2A4QPH2 592 aa24.07■■□□□ 1.44
CHERP-204ENST00000546538 DLK2Q6UY11 383 aa24.07■■□□□ 1.44
CHERP-204ENST00000546538 MICALL2Q8IY33 904 aa24.07■■□□□ 1.44
CHERP-204ENST00000546538 PI4KAP1Q8N8J0 262 aa24.07■■□□□ 1.44
CHERP-204ENST00000546538 PODXL2Q9NZ53 605 aa24.07■■□□□ 1.44
CHERP-204ENST00000546538 ECE2O60344 883 aa24.06■■□□□ 1.44
CHERP-204ENST00000546538 PDE8AO60658 829 aa24.06■■□□□ 1.44
CHERP-204ENST00000546538 CAPN15O75808 1086 aa24.06■■□□□ 1.44
CHERP-204ENST00000546538 KSR2Q6VAB6 950 aa24.05■■□□□ 1.44
CHERP-204ENST00000546538 TLL2Q9Y6L7 1015 aa24.05■■□□□ 1.44
CHERP-204ENST00000546538 WTIPA6NIX2 430 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms