RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 AIMP1Q12904 312 aaKnown RBP16.46■□□□□ 0.23
COPS7A-221ENST00000546229 GRAPQ13588 217 aa16.46■□□□□ 0.23
COPS7A-221ENST00000546229 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
COPS7A-221ENST00000546229 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
COPS7A-221ENST00000546229 PGAP2Q9UHJ9 254 aa16.46■□□□□ 0.23
COPS7A-221ENST00000546229 ZNRF3Q9ULT6 936 aa16.46■□□□□ 0.23
COPS7A-221ENST00000546229 ZNF853P0CG23 659 aa16.45■□□□□ 0.22
COPS7A-221ENST00000546229 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
COPS7A-221ENST00000546229 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
COPS7A-221ENST00000546229 DEFB115Q30KQ5 88 aa16.45■□□□□ 0.22
COPS7A-221ENST00000546229 ADARB2Q9NS39 739 aaKnown RBP16.45■□□□□ 0.22
COPS7A-221ENST00000546229 ZNF646O15015 1829 aaPredicted RBP16.45■□□□□ 0.22
COPS7A-221ENST00000546229 HIRAP54198 1017 aaPredicted RBP16.44■□□□□ 0.22
COPS7A-221ENST00000546229 DPP8Q6V1X1 898 aaPredicted RBP16.44■□□□□ 0.22
COPS7A-221ENST00000546229 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
COPS7A-221ENST00000546229 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
COPS7A-221ENST00000546229 TLL2Q9Y6L7 1015 aa16.44■□□□□ 0.22
COPS7A-221ENST00000546229 PSME4Q14997 1843 aa16.44■□□□□ 0.22
COPS7A-221ENST00000546229 SHTN1A0MZ66 631 aa16.43■□□□□ 0.22
COPS7A-221ENST00000546229 SF3B3Q15393 1217 aaKnown RBP16.43■□□□□ 0.22
COPS7A-221ENST00000546229 HDGFL1Q5TGJ6 251 aa16.43■□□□□ 0.22
COPS7A-221ENST00000546229 MPNDQ8N594 471 aa16.43■□□□□ 0.22
COPS7A-221ENST00000546229 SUPT20HQ8NEM7 779 aa16.43■□□□□ 0.22
COPS7A-221ENST00000546229 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
COPS7A-221ENST00000546229 ADAMTS8Q9UP79 889 aa16.43■□□□□ 0.22
COPS7A-221ENST00000546229 LBX1P52954 281 aa16.42■□□□□ 0.22
COPS7A-221ENST00000546229 DDX10Q13206 875 aaKnown RBP16.42■□□□□ 0.22
COPS7A-221ENST00000546229 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
COPS7A-221ENST00000546229 CELF1Q92879 486 aaKnown RBP16.42■□□□□ 0.22
COPS7A-221ENST00000546229 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
COPS7A-221ENST00000546229 CFAP44Q96MT7 982 aa16.42■□□□□ 0.22
COPS7A-221ENST00000546229 MBIPQ9NS73 344 aa16.42■□□□□ 0.22
COPS7A-221ENST00000546229 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
COPS7A-221ENST00000546229 TRIM28Q13263 835 aaKnown RBP16.41■□□□□ 0.22
COPS7A-221ENST00000546229 CIAPIN1Q6FI81 312 aa16.41■□□□□ 0.22
COPS7A-221ENST00000546229 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
COPS7A-221ENST00000546229 CAPNS2Q96L46 248 aa16.41■□□□□ 0.22
COPS7A-221ENST00000546229 DBF4Q9UBU7 674 aaPredicted RBP16.41■□□□□ 0.22
COPS7A-221ENST00000546229 ABT1Q9ULW3 272 aaKnown RBP16.41■□□□□ 0.22
COPS7A-221ENST00000546229 ZNF609O15014 1411 aa16.41■□□□□ 0.22
COPS7A-221ENST00000546229 RAD17O75943 681 aa16.4■□□□□ 0.22
COPS7A-221ENST00000546229 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
COPS7A-221ENST00000546229 CYP4F22Q6NT55 531 aa16.4■□□□□ 0.22
COPS7A-221ENST00000546229 ANKRD13DQ6ZTN6 518 aa16.4■□□□□ 0.22
COPS7A-221ENST00000546229 TMC4Q7Z404 712 aa16.4■□□□□ 0.22
COPS7A-221ENST00000546229 SAPCD2Q86UD0 394 aa16.4■□□□□ 0.22
COPS7A-221ENST00000546229 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
COPS7A-221ENST00000546229 FAM89AQ96GI7 184 aa16.4■□□□□ 0.22
COPS7A-221ENST00000546229 GLIS2Q9BZE0 524 aaPredicted RBP16.4■□□□□ 0.22
COPS7A-221ENST00000546229 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
COPS7A-221ENST00000546229 POLLQ9UGP5 575 aa16.39■□□□□ 0.21
COPS7A-221ENST00000546229 EGFRP00533 1210 aa16.38■□□□□ 0.21
COPS7A-221ENST00000546229 MAP2K1Q02750 393 aaPredicted RBP16.38■□□□□ 0.21
COPS7A-221ENST00000546229 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
COPS7A-221ENST00000546229 PRKRIP1Q9H875 184 aaPredicted RBP16.38■□□□□ 0.21
COPS7A-221ENST00000546229 GPSM2P81274 684 aa16.37■□□□□ 0.21
COPS7A-221ENST00000546229 HHIPL1Q96JK4 782 aa16.37■□□□□ 0.21
COPS7A-221ENST00000546229 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
COPS7A-221ENST00000546229 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
COPS7A-221ENST00000546229 PSMD14O00487 310 aa16.36■□□□□ 0.21
COPS7A-221ENST00000546229 AOC2O75106 756 aa16.36■□□□□ 0.21
COPS7A-221ENST00000546229 TNIP1Q15025 636 aa16.36■□□□□ 0.21
COPS7A-221ENST00000546229 WDR43Q15061 677 aaKnown RBP eCLIP16.36■□□□□ 0.21
COPS7A-221ENST00000546229 MICALL2Q8IY33 904 aa16.36■□□□□ 0.21
COPS7A-221ENST00000546229 DPF2Q92785 391 aa16.36■□□□□ 0.21
COPS7A-221ENST00000546229 GPR101Q96P66 508 aaPredicted RBP16.36■□□□□ 0.21
COPS7A-221ENST00000546229 PHAXQ9H814 394 aaKnown RBP16.36■□□□□ 0.21
COPS7A-221ENST00000546229 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
COPS7A-221ENST00000546229 ZBTB12Q9Y330 459 aaPredicted RBP16.36■□□□□ 0.21
COPS7A-221ENST00000546229 IRS4O14654 1257 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-221ENST00000546229 CELF2O95319 508 aaKnown RBP16.35■□□□□ 0.21
COPS7A-221ENST00000546229 ECE1P42892 770 aa16.35■□□□□ 0.21
COPS7A-221ENST00000546229 DLK2Q6UY11 383 aa16.35■□□□□ 0.21
COPS7A-221ENST00000546229 TMX4Q9H1E5 349 aaPredicted RBP16.35■□□□□ 0.21
COPS7A-221ENST00000546229 DBNDD1Q9H9R9 158 aa16.35■□□□□ 0.21
COPS7A-221ENST00000546229 KCNQ5Q9NR82 932 aa16.35■□□□□ 0.21
COPS7A-221ENST00000546229 PODXL2Q9NZ53 605 aa16.35■□□□□ 0.21
COPS7A-221ENST00000546229 CNOT7Q9UIV1 285 aaKnown RBP16.35■□□□□ 0.21
COPS7A-221ENST00000546229 POLR2AP24928 1970 aaKnown RBP16.35■□□□□ 0.21
COPS7A-221ENST00000546229 ZBTB38Q8NAP3 1195 aaPredicted RBP16.34■□□□□ 0.21
COPS7A-221ENST00000546229 TBC1D16Q8TBP0 767 aa16.34■□□□□ 0.21
COPS7A-221ENST00000546229 MYH3P11055 1940 aa16.34■□□□□ 0.21
COPS7A-221ENST00000546229 SPEF2Q9C093 1822 aa16.33■□□□□ 0.21
COPS7A-221ENST00000546229 APAF1O14727 1248 aa16.33■□□□□ 0.2
COPS7A-221ENST00000546229 ECE2O60344 883 aa16.33■□□□□ 0.2
COPS7A-221ENST00000546229 MAP2K2P36507 400 aa16.33■□□□□ 0.2
COPS7A-221ENST00000546229 WASHC4Q2M389 1173 aa16.33■□□□□ 0.2
COPS7A-221ENST00000546229 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.2
COPS7A-221ENST00000546229 C8orf58Q8NAV2 365 aa16.33■□□□□ 0.2
COPS7A-221ENST00000546229 ABHD8Q96I13 439 aa16.33■□□□□ 0.2
COPS7A-221ENST00000546229 SEC31BQ9NQW1 1179 aa16.33■□□□□ 0.2
COPS7A-221ENST00000546229 SAMD7Q7Z3H4 446 aa16.32■□□□□ 0.2
COPS7A-221ENST00000546229 ZIC5Q96T25 663 aa16.32■□□□□ 0.2
COPS7A-221ENST00000546229 BCL2L13Q9BXK5 485 aa16.32■□□□□ 0.2
COPS7A-221ENST00000546229 NSFL1CQ9UNZ2 370 aaKnown RBP16.32■□□□□ 0.2
COPS7A-221ENST00000546229 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
COPS7A-221ENST00000546229 RPS12P25398 132 aaKnown RBP16.31■□□□□ 0.2
COPS7A-221ENST00000546229 BRPF1P55201 1214 aaPredicted RBP16.31■□□□□ 0.2
COPS7A-221ENST00000546229 RPS8P62241 208 aaKnown RBP16.31■□□□□ 0.2
COPS7A-221ENST00000546229 CDC37L1Q7L3B6 337 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms