RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 GOLGA2Q08379 1002 aa21.09■□□□□ 0.97
SPPL3-207ENST00000543608 MAP1SQ66K74 1059 aaPredicted RBP21.09■□□□□ 0.97
SPPL3-207ENST00000543608 RIC3Q7Z5B4 369 aa21.09■□□□□ 0.97
SPPL3-207ENST00000543608 SP8Q8IXZ3 490 aa21.09■□□□□ 0.97
SPPL3-207ENST00000543608 TSR2Q969E8 191 aaKnown RBP21.09■□□□□ 0.97
SPPL3-207ENST00000543608 ITGBL1O95965 494 aaPredicted RBP21.08■□□□□ 0.97
SPPL3-207ENST00000543608 PNMA8AQ86V59 439 aaPredicted RBP21.08■□□□□ 0.97
SPPL3-207ENST00000543608 MPNDQ8N594 471 aa21.08■□□□□ 0.97
SPPL3-207ENST00000543608 TSPYL6Q8N831 410 aa21.08■□□□□ 0.97
SPPL3-207ENST00000543608 RTFDC1Q9BY42 306 aaPredicted RBP21.08■□□□□ 0.97
SPPL3-207ENST00000543608 LMOD1P29536 600 aaPredicted RBP21.07■□□□□ 0.96
SPPL3-207ENST00000543608 EPS15P42566 896 aa21.07■□□□□ 0.96
SPPL3-207ENST00000543608 CELF1Q92879 486 aaKnown RBP21.07■□□□□ 0.96
SPPL3-207ENST00000543608 MYD88Q99836 296 aa21.07■□□□□ 0.96
SPPL3-207ENST00000543608 SUPT20HQ8NEM7 779 aa21.06■□□□□ 0.96
SPPL3-207ENST00000543608 IRS4O14654 1257 aaPredicted RBP21.05■□□□□ 0.96
SPPL3-207ENST00000543608 SF3B3Q15393 1217 aaKnown RBP21.05■□□□□ 0.96
SPPL3-207ENST00000543608 ZNRF3Q9ULT6 936 aa21.05■□□□□ 0.96
SPPL3-207ENST00000543608 HSPA1AP0DMV8 641 aaKnown RBP21.04■□□□□ 0.96
SPPL3-207ENST00000543608 HSPA1BP0DMV9 641 aaKnown RBP21.04■□□□□ 0.96
SPPL3-207ENST00000543608 CXCL9Q07325 125 aa21.04■□□□□ 0.96
SPPL3-207ENST00000543608 KIAA2012Q0VF49 1180 aa21.04■□□□□ 0.96
SPPL3-207ENST00000543608 TRIM28Q13263 835 aaKnown RBP21.04■□□□□ 0.96
SPPL3-207ENST00000543608 CNTROBQ8N137 903 aa21.04■□□□□ 0.96
SPPL3-207ENST00000543608 JARID2Q92833 1246 aaPredicted RBP21.04■□□□□ 0.96
SPPL3-207ENST00000543608 CNTNAP1P78357 1384 aa21.03■□□□□ 0.96
SPPL3-207ENST00000543608 COL13A1Q5TAT6 717 aaPredicted RBP21.03■□□□□ 0.96
SPPL3-207ENST00000543608 VPS33BQ9H267 617 aa21.03■□□□□ 0.96
SPPL3-207ENST00000543608 MRS2Q9HD23 443 aa21.03■□□□□ 0.96
SPPL3-207ENST00000543608 TMEM88BA6NKF7 163 aa21.02■□□□□ 0.96
SPPL3-207ENST00000543608 RAD17O75943 681 aa21.02■□□□□ 0.96
SPPL3-207ENST00000543608 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
SPPL3-207ENST00000543608 CCDC30Q5VVM6 783 aa21.02■□□□□ 0.96
SPPL3-207ENST00000543608 WWC1Q8IX03 1113 aa21.02■□□□□ 0.96
SPPL3-207ENST00000543608 ZBTB38Q8NAP3 1195 aaPredicted RBP21.02■□□□□ 0.96
SPPL3-207ENST00000543608 YDJCA8MPS7 323 aa21.01■□□□□ 0.95
SPPL3-207ENST00000543608 GMPSP49915 693 aaPredicted RBP21.01■□□□□ 0.95
SPPL3-207ENST00000543608 FMR1Q06787 632 aaKnown RBP eCLIP21.01■□□□□ 0.95
SPPL3-207ENST00000543608 TMC4Q7Z404 712 aa21.01■□□□□ 0.95
SPPL3-207ENST00000543608 GPRC5DQ9NZD1 345 aa21.01■□□□□ 0.95
SPPL3-207ENST00000543608 GPSM2P81274 684 aa21■□□□□ 0.95
SPPL3-207ENST00000543608 CCDC27Q2M243 656 aa21■□□□□ 0.95
SPPL3-207ENST00000543608 CIAPIN1Q6FI81 312 aa21■□□□□ 0.95
SPPL3-207ENST00000543608 GPR101Q96P66 508 aaPredicted RBP21■□□□□ 0.95
SPPL3-207ENST00000543608 METTL22Q9BUU2 404 aaPredicted RBP21■□□□□ 0.95
SPPL3-207ENST00000543608 SEC31BQ9NQW1 1179 aa21■□□□□ 0.95
SPPL3-207ENST00000543608 NSFL1CQ9UNZ2 370 aaKnown RBP21■□□□□ 0.95
SPPL3-207ENST00000543608 MAP3K2Q9Y2U5 619 aa21■□□□□ 0.95
SPPL3-207ENST00000543608 ZNF316A6NFI3 1004 aaPredicted RBP20.99■□□□□ 0.95
SPPL3-207ENST00000543608 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
SPPL3-207ENST00000543608 CCDC191Q8NCU4 936 aa20.99■□□□□ 0.95
SPPL3-207ENST00000543608 CCDC85AQ96PX6 553 aaPredicted RBP20.99■□□□□ 0.95
SPPL3-207ENST00000543608 CWC25Q9NXE8 425 aaPredicted RBP20.99■□□□□ 0.95
SPPL3-207ENST00000543608 ANP32CO43423 234 aa20.98■□□□□ 0.95
SPPL3-207ENST00000543608 USP50Q70EL3 339 aaPredicted RBP20.98■□□□□ 0.95
SPPL3-207ENST00000543608 POLLQ9UGP5 575 aa20.98■□□□□ 0.95
SPPL3-207ENST00000543608 SALL2Q9Y467 1007 aaPredicted RBP20.98■□□□□ 0.95
SPPL3-207ENST00000543608 SPEF2Q9C093 1822 aa20.98■□□□□ 0.95
SPPL3-207ENST00000543608 TRPM7Q96QT4 1865 aa20.97■□□□□ 0.95
SPPL3-207ENST00000543608 SHTN1A0MZ66 631 aa20.97■□□□□ 0.95
SPPL3-207ENST00000543608 C6orf229H3BNL8 230 aa20.97■□□□□ 0.95
SPPL3-207ENST00000543608 TRAF5O00463 557 aa20.97■□□□□ 0.95
SPPL3-207ENST00000543608 RIMBP2O15034 1052 aa20.97■□□□□ 0.95
SPPL3-207ENST00000543608 PCCAP05165 728 aaPredicted RBP20.97■□□□□ 0.95
SPPL3-207ENST00000543608 VEGFBP49765 207 aa20.97■□□□□ 0.95
SPPL3-207ENST00000543608 TWISTNBQ3B726 338 aaPredicted RBP20.97■□□□□ 0.95
SPPL3-207ENST00000543608 G2E3Q7L622 706 aa20.97■□□□□ 0.95
SPPL3-207ENST00000543608 BCL2L13Q9BXK5 485 aa20.97■□□□□ 0.95
SPPL3-207ENST00000543608 DBNDD1Q9H9R9 158 aa20.97■□□□□ 0.95
SPPL3-207ENST00000543608 ADARB2Q9NS39 739 aaKnown RBP20.97■□□□□ 0.95
SPPL3-207ENST00000543608 MYH3P11055 1940 aa20.96■□□□□ 0.95
SPPL3-207ENST00000543608 PI4KAP2A4QPH2 592 aa20.96■□□□□ 0.95
SPPL3-207ENST00000543608 RPS8P62241 208 aaKnown RBP20.96■□□□□ 0.95
SPPL3-207ENST00000543608 WASHC4Q2M389 1173 aa20.96■□□□□ 0.95
SPPL3-207ENST00000543608 PI4KAP1Q8N8J0 262 aa20.96■□□□□ 0.95
SPPL3-207ENST00000543608 STK31Q9BXU1 1019 aa20.96■□□□□ 0.95
SPPL3-207ENST00000543608 PDE8AO60658 829 aa20.95■□□□□ 0.94
SPPL3-207ENST00000543608 IGKV5-2P06315 115 aa20.95■□□□□ 0.94
SPPL3-207ENST00000543608 KSR2Q6VAB6 950 aa20.95■□□□□ 0.94
SPPL3-207ENST00000543608 ABT1Q9ULW3 272 aaKnown RBP20.95■□□□□ 0.94
SPPL3-207ENST00000543608 SCN9AQ15858 1988 aa20.95■□□□□ 0.94
SPPL3-207ENST00000543608 FANCIQ9NVI1 1328 aa20.95■□□□□ 0.94
SPPL3-207ENST00000543608 TNIP1Q15025 636 aa20.94■□□□□ 0.94
SPPL3-207ENST00000543608 DOK7Q18PE1 504 aa20.94■□□□□ 0.94
SPPL3-207ENST00000543608 CWF19L2Q2TBE0 894 aaKnown RBP20.94■□□□□ 0.94
SPPL3-207ENST00000543608 CCDC152Q4G0S7 254 aa20.94■□□□□ 0.94
SPPL3-207ENST00000543608 TBC1D16Q8TBP0 767 aa20.94■□□□□ 0.94
SPPL3-207ENST00000543608 TRPM4Q8TD43 1214 aa20.94■□□□□ 0.94
SPPL3-207ENST00000543608 CHMP4AQ9BY43 222 aa20.94■□□□□ 0.94
SPPL3-207ENST00000543608 ZBTB12Q9Y330 459 aaPredicted RBP20.94■□□□□ 0.94
SPPL3-207ENST00000543608 IL16Q14005 1332 aa20.94■□□□□ 0.94
SPPL3-207ENST00000543608 KCNQ5Q9NR82 932 aa20.93■□□□□ 0.94
SPPL3-207ENST00000543608 CDHR2Q9BYE9 1310 aa20.93■□□□□ 0.94
SPPL3-207ENST00000543608 RASSF10A6NK89 507 aa20.92■□□□□ 0.94
SPPL3-207ENST00000543608 PSMD14O00487 310 aa20.92■□□□□ 0.94
SPPL3-207ENST00000543608 ECE2O60344 883 aa20.92■□□□□ 0.94
SPPL3-207ENST00000543608 SLC4A2P04920 1241 aa20.92■□□□□ 0.94
SPPL3-207ENST00000543608 HSP90B1P14625 803 aaKnown RBP20.92■□□□□ 0.94
SPPL3-207ENST00000543608 HIRAP54198 1017 aaPredicted RBP20.92■□□□□ 0.94
SPPL3-207ENST00000543608 RTL9Q8NET4 1388 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms