RNA–Protein interactions for RNA: ENST00000542108.1

KNOP1P1-201, Transcript of lysine rich nucleolar protein 1 pseudogene 1, humanhuman

BASIC

Gene KNOP1P1, Length 989 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P1-201ENST00000542108 TMEM88BA6NKF7 163 aa17.12■□□□□ 0.33
KNOP1P1-201ENST00000542108 ATP5J2-PTCD1G3V325 749 aa17.12■□□□□ 0.33
KNOP1P1-201ENST00000542108 SCNN1DP51172 638 aa17.12■□□□□ 0.33
KNOP1P1-201ENST00000542108 KIAA2012Q0VF49 1180 aa17.12■□□□□ 0.33
KNOP1P1-201ENST00000542108 SLC51AQ86UW1 340 aa17.12■□□□□ 0.33
KNOP1P1-201ENST00000542108 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
KNOP1P1-201ENST00000542108 CCDC27Q2M243 656 aa17.11■□□□□ 0.33
KNOP1P1-201ENST00000542108 CCDC30Q5VVM6 783 aa17.11■□□□□ 0.33
KNOP1P1-201ENST00000542108 USP50Q70EL3 339 aaPredicted RBP17.11■□□□□ 0.33
KNOP1P1-201ENST00000542108 RIC3Q7Z5B4 369 aa17.11■□□□□ 0.33
KNOP1P1-201ENST00000542108 CNTROBQ8N137 903 aa17.11■□□□□ 0.33
KNOP1P1-201ENST00000542108 FAM89AQ96GI7 184 aa17.11■□□□□ 0.33
KNOP1P1-201ENST00000542108 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
KNOP1P1-201ENST00000542108 CNTNAP1P78357 1384 aa17.11■□□□□ 0.33
KNOP1P1-201ENST00000542108 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
KNOP1P1-201ENST00000542108 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
KNOP1P1-201ENST00000542108 ZBTB38Q8NAP3 1195 aaPredicted RBP17.1■□□□□ 0.33
KNOP1P1-201ENST00000542108 ELL2O00472 640 aaPredicted RBP17.09■□□□□ 0.33
KNOP1P1-201ENST00000542108 IRS4O14654 1257 aaPredicted RBP17.09■□□□□ 0.33
KNOP1P1-201ENST00000542108 DDX58O95786 925 aaKnown RBP17.09■□□□□ 0.33
KNOP1P1-201ENST00000542108 HSPA1AP0DMV8 641 aaKnown RBP17.09■□□□□ 0.33
KNOP1P1-201ENST00000542108 HSPA1BP0DMV9 641 aaKnown RBP17.09■□□□□ 0.33
KNOP1P1-201ENST00000542108 MAP1SQ66K74 1059 aaPredicted RBP17.09■□□□□ 0.33
KNOP1P1-201ENST00000542108 C8orf58Q8NAV2 365 aa17.09■□□□□ 0.33
KNOP1P1-201ENST00000542108 MKRN1Q9UHC7 482 aaKnown RBP17.09■□□□□ 0.33
KNOP1P1-201ENST00000542108 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
KNOP1P1-201ENST00000542108 EPS15P42566 896 aa17.08■□□□□ 0.32
KNOP1P1-201ENST00000542108 CXCL9Q07325 125 aa17.08■□□□□ 0.32
KNOP1P1-201ENST00000542108 TNIP1Q15025 636 aa17.08■□□□□ 0.32
KNOP1P1-201ENST00000542108 CCDC191Q8NCU4 936 aa17.08■□□□□ 0.32
KNOP1P1-201ENST00000542108 PHAXQ9H814 394 aaKnown RBP17.08■□□□□ 0.32
KNOP1P1-201ENST00000542108 ADARB2Q9NS39 739 aaKnown RBP17.08■□□□□ 0.32
KNOP1P1-201ENST00000542108 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.32
KNOP1P1-201ENST00000542108 CIAPIN1Q6FI81 312 aa17.07■□□□□ 0.32
KNOP1P1-201ENST00000542108 TAF1P21675 1872 aa17.07■□□□□ 0.32
KNOP1P1-201ENST00000542108 IL16Q14005 1332 aa17.06■□□□□ 0.32
KNOP1P1-201ENST00000542108 PCCAP05165 728 aaPredicted RBP17.06■□□□□ 0.32
KNOP1P1-201ENST00000542108 CELF1Q92879 486 aaKnown RBP17.06■□□□□ 0.32
KNOP1P1-201ENST00000542108 MYD88Q99836 296 aa17.06■□□□□ 0.32
KNOP1P1-201ENST00000542108 RASSF10A6NK89 507 aa17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 RPS8P62241 208 aaKnown RBP17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 WASHC4Q2M389 1173 aa17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 CCDC184Q52MB2 194 aa17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 RTL5Q5HYW3 569 aaPredicted RBP17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 METTL22Q9BUU2 404 aaPredicted RBP17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 STK31Q9BXU1 1019 aa17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
KNOP1P1-201ENST00000542108 GMPSP49915 693 aaPredicted RBP17.04■□□□□ 0.32
KNOP1P1-201ENST00000542108 COL13A1Q5TAT6 717 aaPredicted RBP17.04■□□□□ 0.32
KNOP1P1-201ENST00000542108 TSPYL6Q8N831 410 aa17.04■□□□□ 0.32
KNOP1P1-201ENST00000542108 EYA3Q99504 573 aa17.04■□□□□ 0.32
KNOP1P1-201ENST00000542108 PDE8AO60658 829 aa17.03■□□□□ 0.32
KNOP1P1-201ENST00000542108 RAD17O75943 681 aa17.03■□□□□ 0.32
KNOP1P1-201ENST00000542108 CCDC152Q4G0S7 254 aa17.03■□□□□ 0.32
KNOP1P1-201ENST00000542108 TSR2Q969E8 191 aaKnown RBP17.03■□□□□ 0.32
KNOP1P1-201ENST00000542108 BCL2L13Q9BXK5 485 aa17.03■□□□□ 0.32
KNOP1P1-201ENST00000542108 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
KNOP1P1-201ENST00000542108 YDJCA8MPS7 323 aa17.02■□□□□ 0.32
KNOP1P1-201ENST00000542108 C6orf229H3BNL8 230 aa17.02■□□□□ 0.32
KNOP1P1-201ENST00000542108 ANP32CO43423 234 aa17.02■□□□□ 0.32
KNOP1P1-201ENST00000542108 VEGFBP49765 207 aa17.02■□□□□ 0.32
KNOP1P1-201ENST00000542108 KSR2Q6VAB6 950 aa17.02■□□□□ 0.32
KNOP1P1-201ENST00000542108 ZC3H15Q8WU90 426 aaKnown RBP17.02■□□□□ 0.32
KNOP1P1-201ENST00000542108 PODXL2Q9NZ53 605 aa17.02■□□□□ 0.32
KNOP1P1-201ENST00000542108 MAP3K2Q9Y2U5 619 aa17.02■□□□□ 0.32
KNOP1P1-201ENST00000542108 GPSM2P81274 684 aa17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 DEFB115Q30KQ5 88 aa17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 DPF2Q92785 391 aa17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 POLLQ9UGP5 575 aa17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 PGAP2Q9UHJ9 254 aa17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 ABT1Q9ULW3 272 aaKnown RBP17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 TRPM7Q96QT4 1865 aa17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 COL4A1P02462 1669 aa17.01■□□□□ 0.31
KNOP1P1-201ENST00000542108 PI4KAP2A4QPH2 592 aa17■□□□□ 0.31
KNOP1P1-201ENST00000542108 RPS12P25398 132 aaKnown RBP17■□□□□ 0.31
KNOP1P1-201ENST00000542108 PI4KAP1Q8N8J0 262 aa17■□□□□ 0.31
KNOP1P1-201ENST00000542108 TBC1D16Q8TBP0 767 aa17■□□□□ 0.31
KNOP1P1-201ENST00000542108 ZNF316A6NFI3 1004 aaPredicted RBP16.99■□□□□ 0.31
KNOP1P1-201ENST00000542108 H7C1D1 291 aa16.99■□□□□ 0.31
KNOP1P1-201ENST00000542108 TNS4Q8IZW8 715 aa16.99■□□□□ 0.31
KNOP1P1-201ENST00000542108 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
KNOP1P1-201ENST00000542108 SEC31BQ9NQW1 1179 aa16.99■□□□□ 0.31
KNOP1P1-201ENST00000542108 CNOT7Q9UIV1 285 aaKnown RBP16.99■□□□□ 0.31
KNOP1P1-201ENST00000542108 ECE2O60344 883 aa16.98■□□□□ 0.31
KNOP1P1-201ENST00000542108 IGKV5-2P06315 115 aa16.98■□□□□ 0.31
KNOP1P1-201ENST00000542108 ANKRD18AQ8IVF6 992 aa16.98■□□□□ 0.31
KNOP1P1-201ENST00000542108 WDR63Q8IWG1 891 aa16.98■□□□□ 0.31
KNOP1P1-201ENST00000542108 ZC3H12CQ9C0D7 883 aaKnown RBP16.98■□□□□ 0.31
KNOP1P1-201ENST00000542108 DBNDD1Q9H9R9 158 aa16.98■□□□□ 0.31
KNOP1P1-201ENST00000542108 ANKIB1Q9P2G1 1089 aa16.98■□□□□ 0.31
KNOP1P1-201ENST00000542108 GGA1Q9UJY5 639 aa16.98■□□□□ 0.31
KNOP1P1-201ENST00000542108 WDR33Q9C0J8 1336 aaKnown RBP16.97■□□□□ 0.31
KNOP1P1-201ENST00000542108 TRAF5O00463 557 aa16.97■□□□□ 0.31
KNOP1P1-201ENST00000542108 PSMD14O00487 310 aa16.97■□□□□ 0.31
KNOP1P1-201ENST00000542108 RIMBP2O15034 1052 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms