RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 NBPF7P0C2Y1 421 aaPredicted RBP12.02□□□□□ -0.49
MDH1-215ENST00000539945 PRIM1P49642 420 aaKnown RBP12.02□□□□□ -0.49
MDH1-215ENST00000539945 PLBD2Q8NHP8 589 aa12.02□□□□□ -0.49
MDH1-215ENST00000539945 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
MDH1-215ENST00000539945 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
MDH1-215ENST00000539945 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
MDH1-215ENST00000539945 IGKV5-2P06315 115 aa12.01□□□□□ -0.49
MDH1-215ENST00000539945 PIP4K2AP48426 406 aaPredicted RBP12.01□□□□□ -0.49
MDH1-215ENST00000539945 CWF19L2Q2TBE0 894 aaKnown RBP12.01□□□□□ -0.49
MDH1-215ENST00000539945 NYAP1Q6ZVC0 841 aa12.01□□□□□ -0.49
MDH1-215ENST00000539945 SSH3Q8TE77 659 aa12.01□□□□□ -0.49
MDH1-215ENST00000539945 C9orf78Q9NZ63 289 aaPredicted RBP12.01□□□□□ -0.49
MDH1-215ENST00000539945 USP21Q9UK80 565 aa12.01□□□□□ -0.49
MDH1-215ENST00000539945 PNMA6EA0A0J9YXQ4 647 aa12□□□□□ -0.49
MDH1-215ENST00000539945 NEURL1BA8MQ27 555 aa12□□□□□ -0.49
MDH1-215ENST00000539945 GRM8O00222 908 aa12□□□□□ -0.49
MDH1-215ENST00000539945 EVI5O60447 810 aa12□□□□□ -0.49
MDH1-215ENST00000539945 STARD3NLO95772 234 aa12□□□□□ -0.49
MDH1-215ENST00000539945 A1BGP04217 495 aa12□□□□□ -0.49
MDH1-215ENST00000539945 MTX1Q13505 466 aa12□□□□□ -0.49
MDH1-215ENST00000539945 FAM98CQ17RN3 349 aaKnown RBP12□□□□□ -0.49
MDH1-215ENST00000539945 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
MDH1-215ENST00000539945 DNAJC10Q8IXB1 793 aa11.99□□□□□ -0.49
MDH1-215ENST00000539945 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
MDH1-215ENST00000539945 PPP1R3GB7ZBB8 358 aa11.98□□□□□ -0.49
MDH1-215ENST00000539945 GCKRQ14397 625 aa11.98□□□□□ -0.49
MDH1-215ENST00000539945 MEX3CQ5U5Q3 659 aaKnown RBP11.98□□□□□ -0.49
MDH1-215ENST00000539945 Q6ZNB5 142 aa11.98□□□□□ -0.49
MDH1-215ENST00000539945 PPP1R42Q7Z4L9 355 aa11.98□□□□□ -0.49
MDH1-215ENST00000539945 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
MDH1-215ENST00000539945 MYD88Q99836 296 aa11.98□□□□□ -0.49
MDH1-215ENST00000539945 ADAM33Q9BZ11 813 aa11.98□□□□□ -0.49
MDH1-215ENST00000539945 RABGEF1Q9UJ41 708 aa11.98□□□□□ -0.49
MDH1-215ENST00000539945 KAT6BQ8WYB5 2073 aa11.97□□□□□ -0.49
MDH1-215ENST00000539945 THSD7AQ9UPZ6 1657 aa11.97□□□□□ -0.49
MDH1-215ENST00000539945 CYP19A1P11511 503 aaPredicted RBP11.97□□□□□ -0.49
MDH1-215ENST00000539945 BMP2KLQ5H9B9 411 aa11.97□□□□□ -0.49
MDH1-215ENST00000539945 TTLL7Q6ZT98 887 aa11.97□□□□□ -0.49
MDH1-215ENST00000539945 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
MDH1-215ENST00000539945 COL15A1P39059 1388 aa11.96□□□□□ -0.49
MDH1-215ENST00000539945 SRGAP3O43295 1099 aa11.96□□□□□ -0.49
MDH1-215ENST00000539945 RAB11FIP3O75154 756 aa11.96□□□□□ -0.49
MDH1-215ENST00000539945 PLEKHM2Q8IWE5 1019 aa11.96□□□□□ -0.49
MDH1-215ENST00000539945 EXOC6BQ9Y2D4 811 aa11.96□□□□□ -0.49
MDH1-215ENST00000539945 TJP1Q07157 1748 aa11.96□□□□□ -0.5
MDH1-215ENST00000539945 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
MDH1-215ENST00000539945 SMARCC1Q92922 1105 aaPredicted RBP11.95□□□□□ -0.5
MDH1-215ENST00000539945 ACSBG1Q96GR2 724 aa11.95□□□□□ -0.5
MDH1-215ENST00000539945 KAZALD1Q96I82 304 aa11.95□□□□□ -0.5
MDH1-215ENST00000539945 SUCLG2Q96I99 432 aa11.95□□□□□ -0.5
MDH1-215ENST00000539945 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
MDH1-215ENST00000539945 LRRCC1Q9C099 1032 aa11.95□□□□□ -0.5
MDH1-215ENST00000539945 NOP58Q9Y2X3 529 aaKnown RBP11.95□□□□□ -0.5
MDH1-215ENST00000539945 AFF2P51816 1311 aa11.95□□□□□ -0.5
MDH1-215ENST00000539945 CICQ96RK0 1608 aaPredicted RBP11.95□□□□□ -0.5
MDH1-215ENST00000539945 AFDNP55196 1824 aaKnown RBP11.95□□□□□ -0.5
MDH1-215ENST00000539945 ONECUT3O60422 494 aaPredicted RBP11.94□□□□□ -0.5
MDH1-215ENST00000539945 ANP32AP39687 249 aaKnown RBP11.94□□□□□ -0.5
MDH1-215ENST00000539945 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
MDH1-215ENST00000539945 C16orf71Q8IYS4 520 aaPredicted RBP11.94□□□□□ -0.5
MDH1-215ENST00000539945 ATRNO75882 1429 aa11.94□□□□□ -0.5
MDH1-215ENST00000539945 ATP5J2-PTCD1G3V325 749 aa11.94□□□□□ -0.5
MDH1-215ENST00000539945 APBB1O00213 710 aa11.94□□□□□ -0.5
MDH1-215ENST00000539945 SMARCA5O60264 1052 aaPredicted RBP11.94□□□□□ -0.5
MDH1-215ENST00000539945 SURF6O75683 361 aaKnown RBP11.94□□□□□ -0.5
MDH1-215ENST00000539945 TRIM28Q13263 835 aaKnown RBP11.94□□□□□ -0.5
MDH1-215ENST00000539945 KIF6Q6ZMV9 814 aa11.94□□□□□ -0.5
MDH1-215ENST00000539945 BICC1Q9H694 974 aaKnown RBP11.94□□□□□ -0.5
MDH1-215ENST00000539945 TRPC5Q9UL62 973 aaPredicted RBP11.94□□□□□ -0.5
MDH1-215ENST00000539945 A0A087WZG4 1122 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 LOC102724428A0A0B4J2F2 783 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 H7C1W4 665 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 IL6STP40189 918 aaPredicted RBP11.93□□□□□ -0.5
MDH1-215ENST00000539945 CASP7P55210 303 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 SIK1P57059 783 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 LAPTM4AQ15012 233 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 CCDC191Q8NCU4 936 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 CWC25Q9NXE8 425 aaPredicted RBP11.93□□□□□ -0.5
MDH1-215ENST00000539945 ZNF831Q5JPB2 1677 aa11.93□□□□□ -0.5
MDH1-215ENST00000539945 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 KCNQ2O43526 872 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 ATP6V1AP38606 617 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 MYT1Q01538 1121 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 TCIRG1Q13488 830 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 TTC22Q5TAA0 569 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 UBE3BQ7Z3V4 1068 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 OTUD7AQ8TE49 926 aaPredicted RBP11.92□□□□□ -0.5
MDH1-215ENST00000539945 KIF1BPQ96EK5 621 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 ISCA1Q9BUE6 129 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 MAP3K15Q6ZN16 1313 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 SALL3Q9BXA9 1300 aa11.92□□□□□ -0.5
MDH1-215ENST00000539945 RREB1Q92766 1687 aa11.91□□□□□ -0.5
MDH1-215ENST00000539945 RABL6Q3YEC7 729 aaPredicted RBP11.91□□□□□ -0.5
MDH1-215ENST00000539945 INTS5Q6P9B9 1019 aaKnown RBP11.91□□□□□ -0.5
MDH1-215ENST00000539945 RHPN1Q8TCX5 695 aa11.91□□□□□ -0.5
MDH1-215ENST00000539945 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
MDH1-215ENST00000539945 SOWAHBA6NEL2 793 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms