RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 NIM1KQ8IY84 436 aa13.41□□□□□ -0.26
CAPN1-225ENST00000533704 MPNDQ8N594 471 aa13.41□□□□□ -0.26
CAPN1-225ENST00000533704 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-225ENST00000533704 LRRC37AA6NMS7 1700 aa13.41□□□□□ -0.26
CAPN1-225ENST00000533704 CEP350Q5VT06 3117 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 PI4KAP2A4QPH2 592 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 FZD9O00144 591 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 POTEJP0CG39 1038 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 G2E3Q7L622 706 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 WDR63Q8IWG1 891 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 SP8Q8IXZ3 490 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 PI4KAP1Q8N8J0 262 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 ZBTB38Q8NAP3 1195 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-225ENST00000533704 SUPT20HQ8NEM7 779 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 METTL22Q9BUU2 404 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-225ENST00000533704 HACL1Q9UJ83 578 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 COL4A1P02462 1669 aa13.4□□□□□ -0.26
CAPN1-225ENST00000533704 EXOSC9Q06265 439 aaKnown RBP13.39□□□□□ -0.27
CAPN1-225ENST00000533704 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
CAPN1-225ENST00000533704 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
CAPN1-225ENST00000533704 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
CAPN1-225ENST00000533704 CHADLQ6NUI6 762 aa13.39□□□□□ -0.27
CAPN1-225ENST00000533704 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
CAPN1-225ENST00000533704 GPC2Q8N158 579 aa13.39□□□□□ -0.27
CAPN1-225ENST00000533704 CCDC191Q8NCU4 936 aa13.39□□□□□ -0.27
CAPN1-225ENST00000533704 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
CAPN1-225ENST00000533704 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-225ENST00000533704 CCDC85AQ96PX6 553 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-225ENST00000533704 TAF1DQ9H5J8 278 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-225ENST00000533704 PCCAP05165 728 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-225ENST00000533704 HSP90B1P14625 803 aaKnown RBP13.38□□□□□ -0.27
CAPN1-225ENST00000533704 TMC4Q7Z404 712 aa13.38□□□□□ -0.27
CAPN1-225ENST00000533704 LMOD1P29536 600 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-225ENST00000533704 EPHX2P34913 555 aa13.37□□□□□ -0.27
CAPN1-225ENST00000533704 FKBP5Q13451 457 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-225ENST00000533704 CWF19L2Q2TBE0 894 aaKnown RBP13.37□□□□□ -0.27
CAPN1-225ENST00000533704 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-225ENST00000533704 NSFL1CQ9UNZ2 370 aaKnown RBP13.37□□□□□ -0.27
CAPN1-225ENST00000533704 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
CAPN1-225ENST00000533704 LTBP1Q14766 1721 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 PDE8AO60658 829 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 IGKV5-2P06315 115 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 FLIIQ13045 1269 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 CCDC152Q4G0S7 254 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 LDHDQ86WU2 507 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 RTFDC1Q9BY42 306 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-225ENST00000533704 MYH16Q9H6N6 1097 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 SEC31BQ9NQW1 1179 aa13.36□□□□□ -0.27
CAPN1-225ENST00000533704 VAMP4O75379 141 aa13.35□□□□□ -0.27
CAPN1-225ENST00000533704 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
CAPN1-225ENST00000533704 GPSM2P81274 684 aa13.35□□□□□ -0.27
CAPN1-225ENST00000533704 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
CAPN1-225ENST00000533704 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
CAPN1-225ENST00000533704 ZNRF3Q9ULT6 936 aa13.35□□□□□ -0.27
CAPN1-225ENST00000533704 NEURL1BA8MQ27 555 aa13.34□□□□□ -0.27
CAPN1-225ENST00000533704 RAD17O75943 681 aa13.34□□□□□ -0.27
CAPN1-225ENST00000533704 CXCL9Q07325 125 aa13.34□□□□□ -0.27
CAPN1-225ENST00000533704 UBE3BQ7Z3V4 1068 aa13.34□□□□□ -0.27
CAPN1-225ENST00000533704 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
CAPN1-225ENST00000533704 KLRG1Q96E93 195 aa13.34□□□□□ -0.27
CAPN1-225ENST00000533704 GPR101Q96P66 508 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-225ENST00000533704 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
CAPN1-225ENST00000533704 ADAMTSL1Q8N6G6 1762 aa13.34□□□□□ -0.27
CAPN1-225ENST00000533704 EPS15P42566 896 aa13.33□□□□□ -0.28
CAPN1-225ENST00000533704 WASHC4Q2M389 1173 aa13.33□□□□□ -0.28
CAPN1-225ENST00000533704 MAP1SQ66K74 1059 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-225ENST00000533704 CIAPIN1Q6FI81 312 aa13.33□□□□□ -0.28
CAPN1-225ENST00000533704 PNMA8AQ86V59 439 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-225ENST00000533704 BCL2L13Q9BXK5 485 aa13.33□□□□□ -0.28
CAPN1-225ENST00000533704 DBNDD1Q9H9R9 158 aa13.33□□□□□ -0.28
CAPN1-225ENST00000533704 ANKIB1Q9P2G1 1089 aa13.33□□□□□ -0.28
CAPN1-225ENST00000533704 CDHR2Q9BYE9 1310 aa13.33□□□□□ -0.28
CAPN1-225ENST00000533704 GMPSP49915 693 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-225ENST00000533704 SCNN1DP51172 638 aa13.32□□□□□ -0.28
CAPN1-225ENST00000533704 CTSWP56202 376 aa13.32□□□□□ -0.28
CAPN1-225ENST00000533704 ANKRD18AQ8IVF6 992 aa13.32□□□□□ -0.28
CAPN1-225ENST00000533704 POLLQ9UGP5 575 aa13.32□□□□□ -0.28
CAPN1-225ENST00000533704 F6X3S4 739 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 G3V3G9 751 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 UFL1O94874 794 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 TNIP1Q15025 636 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 DOK7Q18PE1 504 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 TBC1D16Q8TBP0 767 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 EYA3Q99504 573 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 SCN9AQ15858 1988 aa13.31□□□□□ -0.28
CAPN1-225ENST00000533704 YDJCA8MPS7 323 aa13.3□□□□□ -0.28
CAPN1-225ENST00000533704 H7C1W4 665 aa13.3□□□□□ -0.28
CAPN1-225ENST00000533704 GCKRQ14397 625 aa13.3□□□□□ -0.28
CAPN1-225ENST00000533704 CNTROBQ8N137 903 aa13.3□□□□□ -0.28
CAPN1-225ENST00000533704 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
CAPN1-225ENST00000533704 TTLL11Q8NHH1 800 aa13.3□□□□□ -0.28
CAPN1-225ENST00000533704 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
CAPN1-225ENST00000533704 GREM2Q9H772 168 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms