RNA–Protein interactions for RNA: ENST00000532044.1

AP003040.1-201, humanhuman

BASIC

Gene AP003040.1, Length 1,024 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003040.1-201ENST00000532044 HYPKQ9NX55 129 aa16.59■□□□□ 0.25
AP003040.1-201ENST00000532044 TMEM88BA6NKF7 163 aa16.58■□□□□ 0.24
AP003040.1-201ENST00000532044 CXCL9Q07325 125 aa16.58■□□□□ 0.24
AP003040.1-201ENST00000532044 GJA3Q9Y6H8 435 aa16.58■□□□□ 0.24
AP003040.1-201ENST00000532044 RASSF10A6NK89 507 aa16.57■□□□□ 0.24
AP003040.1-201ENST00000532044 DDX46Q7L014 1031 aaKnown RBP16.57■□□□□ 0.24
AP003040.1-201ENST00000532044 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
AP003040.1-201ENST00000532044 SUPT20HQ8NEM7 779 aa16.57■□□□□ 0.24
AP003040.1-201ENST00000532044 FAM89AQ96GI7 184 aa16.57■□□□□ 0.24
AP003040.1-201ENST00000532044 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
AP003040.1-201ENST00000532044 ZNRF3Q9ULT6 936 aa16.57■□□□□ 0.24
AP003040.1-201ENST00000532044 CDHR2Q9BYE9 1310 aa16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 YDJCA8MPS7 323 aa16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 VEGFBP49765 207 aa16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 DPP8Q6V1X1 898 aaPredicted RBP16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 USP50Q70EL3 339 aaPredicted RBP16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 MPNDQ8N594 471 aa16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 C8orf58Q8NAV2 365 aa16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 CELF1Q92879 486 aaKnown RBP16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 ZNF428Q96B54 188 aa16.56■□□□□ 0.24
AP003040.1-201ENST00000532044 TRPM7Q96QT4 1865 aa16.55■□□□□ 0.24
AP003040.1-201ENST00000532044 GNAI1P63096 354 aa16.55■□□□□ 0.24
AP003040.1-201ENST00000532044 PHAXQ9H814 394 aaKnown RBP16.55■□□□□ 0.24
AP003040.1-201ENST00000532044 LMOD1P29536 600 aaPredicted RBP16.54■□□□□ 0.24
AP003040.1-201ENST00000532044 FMR1Q06787 632 aaKnown RBP eCLIP16.54■□□□□ 0.24
AP003040.1-201ENST00000532044 PGAP2Q9UHJ9 254 aa16.54■□□□□ 0.24
AP003040.1-201ENST00000532044 CLEC11AQ9Y240 323 aa16.54■□□□□ 0.24
AP003040.1-201ENST00000532044 GMPSP49915 693 aaPredicted RBP16.53■□□□□ 0.24
AP003040.1-201ENST00000532044 ADARB2Q9NS39 739 aaKnown RBP16.53■□□□□ 0.24
AP003040.1-201ENST00000532044 SCN9AQ15858 1988 aa16.52■□□□□ 0.24
AP003040.1-201ENST00000532044 IRS4O14654 1257 aaPredicted RBP16.52■□□□□ 0.24
AP003040.1-201ENST00000532044 FOXN1O15353 648 aa16.52■□□□□ 0.24
AP003040.1-201ENST00000532044 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
AP003040.1-201ENST00000532044 CST9Q5W186 159 aa16.52■□□□□ 0.24
AP003040.1-201ENST00000532044 TSPYL6Q8N831 410 aa16.52■□□□□ 0.24
AP003040.1-201ENST00000532044 ZBTB38Q8NAP3 1195 aaPredicted RBP16.52■□□□□ 0.24
AP003040.1-201ENST00000532044 HIRAP54198 1017 aaPredicted RBP16.51■□□□□ 0.23
AP003040.1-201ENST00000532044 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
AP003040.1-201ENST00000532044 CIAPIN1Q6FI81 312 aa16.51■□□□□ 0.23
AP003040.1-201ENST00000532044 TMX4Q9H1E5 349 aaPredicted RBP16.51■□□□□ 0.23
AP003040.1-201ENST00000532044 WBP1LQ9NX94 342 aa16.51■□□□□ 0.23
AP003040.1-201ENST00000532044 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
AP003040.1-201ENST00000532044 ZNF609O15014 1411 aa16.51■□□□□ 0.23
AP003040.1-201ENST00000532044 RTL9Q8NET4 1388 aa16.51■□□□□ 0.23
AP003040.1-201ENST00000532044 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
AP003040.1-201ENST00000532044 TRAF5O00463 557 aa16.5■□□□□ 0.23
AP003040.1-201ENST00000532044 RAD17O75943 681 aa16.5■□□□□ 0.23
AP003040.1-201ENST00000532044 PCCAP05165 728 aaPredicted RBP16.5■□□□□ 0.23
AP003040.1-201ENST00000532044 GPSM2P81274 684 aa16.5■□□□□ 0.23
AP003040.1-201ENST00000532044 GOLGA2Q08379 1002 aa16.5■□□□□ 0.23
AP003040.1-201ENST00000532044 TNS4Q8IZW8 715 aa16.5■□□□□ 0.23
AP003040.1-201ENST00000532044 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
AP003040.1-201ENST00000532044 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
AP003040.1-201ENST00000532044 DEFB115Q30KQ5 88 aa16.49■□□□□ 0.23
AP003040.1-201ENST00000532044 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
AP003040.1-201ENST00000532044 TRPM4Q8TD43 1214 aa16.49■□□□□ 0.23
AP003040.1-201ENST00000532044 METTL22Q9BUU2 404 aaPredicted RBP16.49■□□□□ 0.23
AP003040.1-201ENST00000532044 PODXL2Q9NZ53 605 aa16.49■□□□□ 0.23
AP003040.1-201ENST00000532044 PSME4Q14997 1843 aa16.49■□□□□ 0.23
AP003040.1-201ENST00000532044 ZNF646O15015 1829 aaPredicted RBP16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 IGKV5-2P06315 115 aa16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 RPS8P62241 208 aaKnown RBP16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 TNIP1Q15025 636 aa16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 RIC3Q7Z5B4 369 aa16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 TBC1D16Q8TBP0 767 aa16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 ZC3H15Q8WU90 426 aaKnown RBP16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 MYD88Q99836 296 aa16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 SEC31BQ9NQW1 1179 aa16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 TLL2Q9Y6L7 1015 aa16.48■□□□□ 0.23
AP003040.1-201ENST00000532044 WDR33Q9C0J8 1336 aaKnown RBP16.47■□□□□ 0.23
AP003040.1-201ENST00000532044 WASHC4Q2M389 1173 aa16.47■□□□□ 0.23
AP003040.1-201ENST00000532044 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
AP003040.1-201ENST00000532044 DPF2Q92785 391 aa16.47■□□□□ 0.23
AP003040.1-201ENST00000532044 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
AP003040.1-201ENST00000532044 PRDM10Q9NQV6 1147 aa16.47■□□□□ 0.23
AP003040.1-201ENST00000532044 PSMD14O00487 310 aa16.46■□□□□ 0.23
AP003040.1-201ENST00000532044 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
AP003040.1-201ENST00000532044 KCNQ5Q9NR82 932 aa16.46■□□□□ 0.23
AP003040.1-201ENST00000532044 NSFL1CQ9UNZ2 370 aaKnown RBP16.46■□□□□ 0.23
AP003040.1-201ENST00000532044 IL16Q14005 1332 aa16.45■□□□□ 0.22
AP003040.1-201ENST00000532044 MYH3P11055 1940 aa16.45■□□□□ 0.22
AP003040.1-201ENST00000532044 EGFRP00533 1210 aa16.45■□□□□ 0.22
AP003040.1-201ENST00000532044 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
AP003040.1-201ENST00000532044 GLIS2Q9BZE0 524 aaPredicted RBP16.45■□□□□ 0.22
AP003040.1-201ENST00000532044 DBNDD1Q9H9R9 158 aa16.45■□□□□ 0.22
AP003040.1-201ENST00000532044 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
AP003040.1-201ENST00000532044 CNOT7Q9UIV1 285 aaKnown RBP16.45■□□□□ 0.22
AP003040.1-201ENST00000532044 ECE2O60344 883 aa16.44■□□□□ 0.22
AP003040.1-201ENST00000532044 PDE8AO60658 829 aa16.44■□□□□ 0.22
AP003040.1-201ENST00000532044 KSR2Q6VAB6 950 aa16.44■□□□□ 0.22
AP003040.1-201ENST00000532044 SAPCD2Q86UD0 394 aa16.44■□□□□ 0.22
AP003040.1-201ENST00000532044 MICALL2Q8IY33 904 aa16.44■□□□□ 0.22
AP003040.1-201ENST00000532044 CAPNS2Q96L46 248 aa16.44■□□□□ 0.22
AP003040.1-201ENST00000532044 ABT1Q9ULW3 272 aaKnown RBP16.44■□□□□ 0.22
AP003040.1-201ENST00000532044 MAP3K2Q9Y2U5 619 aa16.44■□□□□ 0.22
AP003040.1-201ENST00000532044 ZBTB12Q9Y330 459 aaPredicted RBP16.44■□□□□ 0.22
AP003040.1-201ENST00000532044 PI4KAP2A4QPH2 592 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms