RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 HACL1Q9UJ83 578 aa17.54■□□□□ 0.4
SSSCA1-204ENST00000527413 PPIP5K2O43314 1243 aa17.53■□□□□ 0.4
SSSCA1-204ENST00000527413 DDX58O95786 925 aaKnown RBP17.53■□□□□ 0.4
SSSCA1-204ENST00000527413 EIF6P56537 245 aaKnown RBP17.53■□□□□ 0.4
SSSCA1-204ENST00000527413 SF3B3Q15393 1217 aaKnown RBP17.53■□□□□ 0.4
SSSCA1-204ENST00000527413 AOC3Q16853 763 aa17.53■□□□□ 0.4
SSSCA1-204ENST00000527413 TWISTNBQ3B726 338 aaPredicted RBP17.53■□□□□ 0.4
SSSCA1-204ENST00000527413 NIM1KQ8IY84 436 aa17.53■□□□□ 0.4
SSSCA1-204ENST00000527413 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
SSSCA1-204ENST00000527413 RTFDC1Q9BY42 306 aaPredicted RBP17.53■□□□□ 0.4
SSSCA1-204ENST00000527413 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 SPEF2Q9C093 1822 aa17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 IRS4O14654 1257 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 DPP8Q6V1X1 898 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 TMC4Q7Z404 712 aa17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 LDHDQ86WU2 507 aa17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 ZBTB38Q8NAP3 1195 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 KLRG1Q96E93 195 aa17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 METTL22Q9BUU2 404 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 STK31Q9BXU1 1019 aa17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
SSSCA1-204ENST00000527413 EPHX2P34913 555 aa17.51■□□□□ 0.39
SSSCA1-204ENST00000527413 MPNDQ8N594 471 aa17.51■□□□□ 0.39
SSSCA1-204ENST00000527413 CCDC191Q8NCU4 936 aa17.51■□□□□ 0.39
SSSCA1-204ENST00000527413 MAP3K2Q9Y2U5 619 aa17.51■□□□□ 0.39
SSSCA1-204ENST00000527413 GJA3Q9Y6H8 435 aa17.51■□□□□ 0.39
SSSCA1-204ENST00000527413 EAPPQ56P03 285 aaPredicted RBP17.5■□□□□ 0.39
SSSCA1-204ENST00000527413 CELF1Q92879 486 aaKnown RBP17.5■□□□□ 0.39
SSSCA1-204ENST00000527413 CWC25Q9NXE8 425 aaPredicted RBP17.5■□□□□ 0.39
SSSCA1-204ENST00000527413 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
SSSCA1-204ENST00000527413 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-204ENST00000527413 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
SSSCA1-204ENST00000527413 WDR63Q8IWG1 891 aa17.49■□□□□ 0.39
SSSCA1-204ENST00000527413 PI4KAP2A4QPH2 592 aa17.48■□□□□ 0.39
SSSCA1-204ENST00000527413 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
SSSCA1-204ENST00000527413 SCNN1DP51172 638 aa17.48■□□□□ 0.39
SSSCA1-204ENST00000527413 KIAA2012Q0VF49 1180 aa17.48■□□□□ 0.39
SSSCA1-204ENST00000527413 PNMA8AQ86V59 439 aaPredicted RBP17.48■□□□□ 0.39
SSSCA1-204ENST00000527413 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
SSSCA1-204ENST00000527413 PI4KAP1Q8N8J0 262 aa17.48■□□□□ 0.39
SSSCA1-204ENST00000527413 LMOD1P29536 600 aaPredicted RBP17.47■□□□□ 0.39
SSSCA1-204ENST00000527413 G2E3Q7L622 706 aa17.47■□□□□ 0.39
SSSCA1-204ENST00000527413 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
SSSCA1-204ENST00000527413 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
SSSCA1-204ENST00000527413 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
SSSCA1-204ENST00000527413 PDE8AO60658 829 aa17.46■□□□□ 0.39
SSSCA1-204ENST00000527413 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
SSSCA1-204ENST00000527413 IGKV5-2P06315 115 aa17.46■□□□□ 0.39
SSSCA1-204ENST00000527413 JMYQ8N9B5 988 aa17.46■□□□□ 0.39
SSSCA1-204ENST00000527413 TRPM7Q96QT4 1865 aa17.46■□□□□ 0.38
SSSCA1-204ENST00000527413 PSME4Q14997 1843 aa17.45■□□□□ 0.38
SSSCA1-204ENST00000527413 CXCL9Q07325 125 aa17.45■□□□□ 0.38
SSSCA1-204ENST00000527413 NEXNQ0ZGT2 675 aa17.45■□□□□ 0.38
SSSCA1-204ENST00000527413 JARID2Q92833 1246 aaPredicted RBP17.45■□□□□ 0.38
SSSCA1-204ENST00000527413 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
SSSCA1-204ENST00000527413 CLEC11AQ9Y240 323 aa17.45■□□□□ 0.38
SSSCA1-204ENST00000527413 EPS15P42566 896 aa17.44■□□□□ 0.38
SSSCA1-204ENST00000527413 RPS8P62241 208 aaKnown RBP17.44■□□□□ 0.38
SSSCA1-204ENST00000527413 EXOSC9Q06265 439 aaKnown RBP17.44■□□□□ 0.38
SSSCA1-204ENST00000527413 FLIIQ13045 1269 aa17.44■□□□□ 0.38
SSSCA1-204ENST00000527413 CCDC152Q4G0S7 254 aa17.44■□□□□ 0.38
SSSCA1-204ENST00000527413 CREBZFQ9NS37 354 aa17.44■□□□□ 0.38
SSSCA1-204ENST00000527413 NSFL1CQ9UNZ2 370 aaKnown RBP17.44■□□□□ 0.38
SSSCA1-204ENST00000527413 SCN9AQ15858 1988 aa17.44■□□□□ 0.38
SSSCA1-204ENST00000527413 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
SSSCA1-204ENST00000527413 ITGBL1O95965 494 aaPredicted RBP17.43■□□□□ 0.38
SSSCA1-204ENST00000527413 GPSM2P81274 684 aa17.43■□□□□ 0.38
SSSCA1-204ENST00000527413 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-204ENST00000527413 CIAPIN1Q6FI81 312 aa17.43■□□□□ 0.38
SSSCA1-204ENST00000527413 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
SSSCA1-204ENST00000527413 GPRC5DQ9NZD1 345 aa17.43■□□□□ 0.38
SSSCA1-204ENST00000527413 YDJCA8MPS7 323 aa17.42■□□□□ 0.38
SSSCA1-204ENST00000527413 VAMP4O75379 141 aa17.42■□□□□ 0.38
SSSCA1-204ENST00000527413 CTSWP56202 376 aa17.42■□□□□ 0.38
SSSCA1-204ENST00000527413 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
SSSCA1-204ENST00000527413 MAP1SQ66K74 1059 aaPredicted RBP17.42■□□□□ 0.38
SSSCA1-204ENST00000527413 CCDC85AQ96PX6 553 aaPredicted RBP17.42■□□□□ 0.38
SSSCA1-204ENST00000527413 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
SSSCA1-204ENST00000527413 POLLQ9UGP5 575 aa17.42■□□□□ 0.38
SSSCA1-204ENST00000527413 C6orf229H3BNL8 230 aa17.41■□□□□ 0.38
SSSCA1-204ENST00000527413 RAD17O75943 681 aa17.41■□□□□ 0.38
SSSCA1-204ENST00000527413 GMPSP49915 693 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-204ENST00000527413 FKBP5Q13451 457 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-204ENST00000527413 USP50Q70EL3 339 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-204ENST00000527413 CNTROBQ8N137 903 aa17.41■□□□□ 0.38
SSSCA1-204ENST00000527413 TNIP1Q15025 636 aa17.4■□□□□ 0.38
SSSCA1-204ENST00000527413 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
SSSCA1-204ENST00000527413 DNAAF4Q8WXU2 420 aa17.4■□□□□ 0.38
SSSCA1-204ENST00000527413 EYA3Q99504 573 aa17.4■□□□□ 0.38
SSSCA1-204ENST00000527413 ADARB2Q9NS39 739 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-204ENST00000527413 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
SSSCA1-204ENST00000527413 A0A1B0GUL6 1792 aa17.4■□□□□ 0.38
SSSCA1-204ENST00000527413 PCNTO95613 3336 aa17.39■□□□□ 0.38
SSSCA1-204ENST00000527413 TMEM88BA6NKF7 163 aa17.39■□□□□ 0.37
SSSCA1-204ENST00000527413 RIMBP2O15034 1052 aa17.39■□□□□ 0.37
SSSCA1-204ENST00000527413 UBE3BQ7Z3V4 1068 aa17.39■□□□□ 0.37
SSSCA1-204ENST00000527413 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
SSSCA1-204ENST00000527413 GPR101Q96P66 508 aaPredicted RBP17.39■□□□□ 0.37
SSSCA1-204ENST00000527413 DBNDD1Q9H9R9 158 aa17.39■□□□□ 0.37
SSSCA1-204ENST00000527413 RTL9Q8NET4 1388 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms