RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 MAP1SQ66K74 1059 aaPredicted RBP25.49■■□□□ 1.67
PABPC1-215ENST00000520804 CNTROBQ8N137 903 aa25.49■■□□□ 1.67
PABPC1-215ENST00000520804 MPNDQ8N594 471 aa25.49■■□□□ 1.67
PABPC1-215ENST00000520804 CNTNAP1P78357 1384 aa25.48■■□□□ 1.67
PABPC1-215ENST00000520804 TMEM88BA6NKF7 163 aa25.48■■□□□ 1.67
PABPC1-215ENST00000520804 FAM89AQ96GI7 184 aa25.48■■□□□ 1.67
PABPC1-215ENST00000520804 TAF1P21675 1872 aa25.47■■□□□ 1.67
PABPC1-215ENST00000520804 EPS15P42566 896 aa25.47■■□□□ 1.67
PABPC1-215ENST00000520804 TRIM28Q13263 835 aaKnown RBP25.47■■□□□ 1.67
PABPC1-215ENST00000520804 TMC4Q7Z404 712 aa25.47■■□□□ 1.67
PABPC1-215ENST00000520804 ZNRF3Q9ULT6 936 aa25.47■■□□□ 1.67
PABPC1-215ENST00000520804 ELL2O00472 640 aaPredicted RBP25.45■■□□□ 1.66
PABPC1-215ENST00000520804 KIAA2012Q0VF49 1180 aa25.45■■□□□ 1.66
PABPC1-215ENST00000520804 SF3B3Q15393 1217 aaKnown RBP25.45■■□□□ 1.66
PABPC1-215ENST00000520804 LRRC37AA6NMS7 1700 aa25.44■■□□□ 1.66
PABPC1-215ENST00000520804 CXCL9Q07325 125 aa25.44■■□□□ 1.66
PABPC1-215ENST00000520804 GOLGA2Q08379 1002 aa25.44■■□□□ 1.66
PABPC1-215ENST00000520804 USP50Q70EL3 339 aaPredicted RBP25.44■■□□□ 1.66
PABPC1-215ENST00000520804 RIC3Q7Z5B4 369 aa25.44■■□□□ 1.66
PABPC1-215ENST00000520804 PHAXQ9H814 394 aaKnown RBP25.44■■□□□ 1.66
PABPC1-215ENST00000520804 DUOX1Q9NRD9 1551 aa25.43■■□□□ 1.66
PABPC1-215ENST00000520804 RTL5Q5HYW3 569 aaPredicted RBP25.42■■□□□ 1.66
PABPC1-215ENST00000520804 C8orf58Q8NAV2 365 aa25.42■■□□□ 1.66
PABPC1-215ENST00000520804 CELF1Q92879 486 aaKnown RBP25.42■■□□□ 1.66
PABPC1-215ENST00000520804 GPRC5DQ9NZD1 345 aa25.42■■□□□ 1.66
PABPC1-215ENST00000520804 IRS4O14654 1257 aaPredicted RBP25.41■■□□□ 1.66
PABPC1-215ENST00000520804 CCDC184Q52MB2 194 aa25.4■■□□□ 1.66
PABPC1-215ENST00000520804 ADARB2Q9NS39 739 aaKnown RBP25.4■■□□□ 1.66
PABPC1-215ENST00000520804 VEGFBP49765 207 aa25.39■■□□□ 1.66
PABPC1-215ENST00000520804 CIAPIN1Q6FI81 312 aa25.39■■□□□ 1.66
PABPC1-215ENST00000520804 ZBTB38Q8NAP3 1195 aaPredicted RBP25.39■■□□□ 1.66
PABPC1-215ENST00000520804 COL4A1P02462 1669 aa25.39■■□□□ 1.65
PABPC1-215ENST00000520804 GMPSP49915 693 aaPredicted RBP25.38■■□□□ 1.65
PABPC1-215ENST00000520804 MYD88Q99836 296 aa25.38■■□□□ 1.65
PABPC1-215ENST00000520804 CHMP4AQ9BY43 222 aa25.38■■□□□ 1.65
PABPC1-215ENST00000520804 RASSF10A6NK89 507 aa25.37■■□□□ 1.65
PABPC1-215ENST00000520804 RAD17O75943 681 aa25.37■■□□□ 1.65
PABPC1-215ENST00000520804 TNIP1Q15025 636 aa25.37■■□□□ 1.65
PABPC1-215ENST00000520804 CCDC30Q5VVM6 783 aa25.37■■□□□ 1.65
PABPC1-215ENST00000520804 NSFL1CQ9UNZ2 370 aaKnown RBP25.37■■□□□ 1.65
PABPC1-215ENST00000520804 CDHR2Q9BYE9 1310 aa25.37■■□□□ 1.65
PABPC1-215ENST00000520804 YDJCA8MPS7 323 aa25.36■■□□□ 1.65
PABPC1-215ENST00000520804 DEFB115Q30KQ5 88 aa25.36■■□□□ 1.65
PABPC1-215ENST00000520804 TNS4Q8IZW8 715 aa25.36■■□□□ 1.65
PABPC1-215ENST00000520804 CCDC191Q8NCU4 936 aa25.36■■□□□ 1.65
PABPC1-215ENST00000520804 HSP90B1P14625 803 aaKnown RBP25.35■■□□□ 1.65
PABPC1-215ENST00000520804 GPSM2P81274 684 aa25.35■■□□□ 1.65
PABPC1-215ENST00000520804 WASHC4Q2M389 1173 aa25.35■■□□□ 1.65
PABPC1-215ENST00000520804 TSPYL6Q8N831 410 aa25.35■■□□□ 1.65
PABPC1-215ENST00000520804 BCL2L13Q9BXK5 485 aa25.35■■□□□ 1.65
PABPC1-215ENST00000520804 ABT1Q9ULW3 272 aaKnown RBP25.35■■□□□ 1.65
PABPC1-215ENST00000520804 DDX58O95786 925 aaKnown RBP25.34■■□□□ 1.65
PABPC1-215ENST00000520804 RPS8P62241 208 aaKnown RBP25.34■■□□□ 1.65
PABPC1-215ENST00000520804 FMR1Q06787 632 aaKnown RBP eCLIP25.34■■□□□ 1.65
PABPC1-215ENST00000520804 CCDC27Q2M243 656 aa25.34■■□□□ 1.65
PABPC1-215ENST00000520804 METTL22Q9BUU2 404 aaPredicted RBP25.34■■□□□ 1.65
PABPC1-215ENST00000520804 PCCAP05165 728 aaPredicted RBP25.33■■□□□ 1.65
PABPC1-215ENST00000520804 TSR2Q969E8 191 aaKnown RBP25.33■■□□□ 1.65
PABPC1-215ENST00000520804 CWC25Q9NXE8 425 aaPredicted RBP25.33■■□□□ 1.65
PABPC1-215ENST00000520804 POLLQ9UGP5 575 aa25.33■■□□□ 1.65
PABPC1-215ENST00000520804 C6orf229H3BNL8 230 aa25.32■■□□□ 1.64
PABPC1-215ENST00000520804 TRAF5O00463 557 aa25.32■■□□□ 1.64
PABPC1-215ENST00000520804 RIMBP2O15034 1052 aa25.31■■□□□ 1.64
PABPC1-215ENST00000520804 FOXN1O15353 648 aa25.31■■□□□ 1.64
PABPC1-215ENST00000520804 WWC1Q8IX03 1113 aa25.31■■□□□ 1.64
PABPC1-215ENST00000520804 SEC31BQ9NQW1 1179 aa25.31■■□□□ 1.64
PABPC1-215ENST00000520804 PGAP2Q9UHJ9 254 aa25.31■■□□□ 1.64
PABPC1-215ENST00000520804 TRPM7Q96QT4 1865 aa25.31■■□□□ 1.64
PABPC1-215ENST00000520804 PDE8AO60658 829 aa25.3■■□□□ 1.64
PABPC1-215ENST00000520804 CCDC152Q4G0S7 254 aa25.3■■□□□ 1.64
PABPC1-215ENST00000520804 CST9Q5W186 159 aa25.3■■□□□ 1.64
PABPC1-215ENST00000520804 TBC1D16Q8TBP0 767 aa25.3■■□□□ 1.64
PABPC1-215ENST00000520804 EYA3Q99504 573 aa25.3■■□□□ 1.64
PABPC1-215ENST00000520804 DBNDD1Q9H9R9 158 aa25.3■■□□□ 1.64
PABPC1-215ENST00000520804 CNOT7Q9UIV1 285 aaKnown RBP25.3■■□□□ 1.64
PABPC1-215ENST00000520804 MAP3K2Q9Y2U5 619 aa25.3■■□□□ 1.64
PABPC1-215ENST00000520804 HIRAP54198 1017 aaPredicted RBP25.29■■□□□ 1.64
PABPC1-215ENST00000520804 KSR2Q6VAB6 950 aa25.29■■□□□ 1.64
PABPC1-215ENST00000520804 ZC3H15Q8WU90 426 aaKnown RBP25.29■■□□□ 1.64
PABPC1-215ENST00000520804 JARID2Q92833 1246 aaPredicted RBP25.29■■□□□ 1.64
PABPC1-215ENST00000520804 WBP1LQ9NX94 342 aa25.29■■□□□ 1.64
PABPC1-215ENST00000520804 WDR33Q9C0J8 1336 aaKnown RBP25.29■■□□□ 1.64
PABPC1-215ENST00000520804 TRPM4Q8TD43 1214 aa25.28■■□□□ 1.64
PABPC1-215ENST00000520804 AIDAQ96BJ3 306 aa25.28■■□□□ 1.64
PABPC1-215ENST00000520804 STK31Q9BXU1 1019 aa25.28■■□□□ 1.64
PABPC1-215ENST00000520804 PODXL2Q9NZ53 605 aa25.28■■□□□ 1.64
PABPC1-215ENST00000520804 ZBTB12Q9Y330 459 aaPredicted RBP25.28■■□□□ 1.64
PABPC1-215ENST00000520804 SHTN1A0MZ66 631 aa25.27■■□□□ 1.64
PABPC1-215ENST00000520804 PI4KAP2A4QPH2 592 aa25.27■■□□□ 1.64
PABPC1-215ENST00000520804 H7C1D1 291 aa25.27■■□□□ 1.64
PABPC1-215ENST00000520804 PSMD14O00487 310 aa25.27■■□□□ 1.64
PABPC1-215ENST00000520804 NCBP3Q53F19 620 aaKnown RBP25.27■■□□□ 1.64
PABPC1-215ENST00000520804 MICALL2Q8IY33 904 aa25.27■■□□□ 1.64
PABPC1-215ENST00000520804 PI4KAP1Q8N8J0 262 aa25.27■■□□□ 1.64
PABPC1-215ENST00000520804 DPF2Q92785 391 aa25.27■■□□□ 1.64
PABPC1-215ENST00000520804 GPR101Q96P66 508 aaPredicted RBP25.27■■□□□ 1.64
PABPC1-215ENST00000520804 ECE2O60344 883 aa25.26■■□□□ 1.63
PABPC1-215ENST00000520804 IGKV5-2P06315 115 aa25.26■■□□□ 1.63
PABPC1-215ENST00000520804 ZEB1P37275 1124 aaPredicted RBP25.26■■□□□ 1.63
PABPC1-215ENST00000520804 DOK7Q18PE1 504 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 312.3 ms