RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
PTCD2-209ENST00000511752 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTCD2-209ENST00000511752 JARID2Q92833 1246 aaPredicted RBP15.86■□□□□ 0.13
PTCD2-209ENST00000511752 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
PTCD2-209ENST00000511752 TAF1P21675 1872 aa15.85■□□□□ 0.13
PTCD2-209ENST00000511752 CCDC152Q4G0S7 254 aa15.85■□□□□ 0.13
PTCD2-209ENST00000511752 BEND3Q5T5X7 828 aa15.85■□□□□ 0.13
PTCD2-209ENST00000511752 OLFM4Q6UX06 510 aa15.85■□□□□ 0.13
PTCD2-209ENST00000511752 UBE3BQ7Z3V4 1068 aa15.85■□□□□ 0.13
PTCD2-209ENST00000511752 TMC4Q7Z404 712 aa15.85■□□□□ 0.13
PTCD2-209ENST00000511752 BCL2L13Q9BXK5 485 aa15.85■□□□□ 0.13
PTCD2-209ENST00000511752 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
PTCD2-209ENST00000511752 ATP6V0A2Q9Y487 856 aa15.85■□□□□ 0.13
PTCD2-209ENST00000511752 ZBED9Q6R2W3 1325 aa15.85■□□□□ 0.13
PTCD2-209ENST00000511752 ZC3H4Q9UPT8 1303 aaKnown RBP15.85■□□□□ 0.13
PTCD2-209ENST00000511752 H7C1W4 665 aa15.84■□□□□ 0.13
PTCD2-209ENST00000511752 SLC4A10Q6U841 1118 aa15.84■□□□□ 0.13
PTCD2-209ENST00000511752 SP8Q8IXZ3 490 aa15.84■□□□□ 0.13
PTCD2-209ENST00000511752 ZNF526Q8TF50 670 aaPredicted RBP15.84■□□□□ 0.13
PTCD2-209ENST00000511752 PSMD1Q99460 953 aa15.84■□□□□ 0.13
PTCD2-209ENST00000511752 ALDH1L1O75891 902 aa15.83■□□□□ 0.12
PTCD2-209ENST00000511752 PRELPP51888 382 aa15.83■□□□□ 0.12
PTCD2-209ENST00000511752 SRCIN1Q9C0H9 1055 aa15.83■□□□□ 0.12
PTCD2-209ENST00000511752 CTSWP56202 376 aa15.82■□□□□ 0.12
PTCD2-209ENST00000511752 SNED1Q8TER0 1413 aa15.82■□□□□ 0.12
PTCD2-209ENST00000511752 LRRC37AA6NMS7 1700 aa15.81■□□□□ 0.12
PTCD2-209ENST00000511752 UTRNP46939 3433 aa15.81■□□□□ 0.12
PTCD2-209ENST00000511752 BRPF1P55201 1214 aaPredicted RBP15.81■□□□□ 0.12
PTCD2-209ENST00000511752 RPS8P62241 208 aaKnown RBP15.81■□□□□ 0.12
PTCD2-209ENST00000511752 SUPT20HQ8NEM7 779 aa15.81■□□□□ 0.12
PTCD2-209ENST00000511752 KDM2BQ8NHM5 1336 aa15.81■□□□□ 0.12
PTCD2-209ENST00000511752 CNKSR2Q8WXI2 1034 aa15.81■□□□□ 0.12
PTCD2-209ENST00000511752 CELF1Q92879 486 aaKnown RBP15.81■□□□□ 0.12
PTCD2-209ENST00000511752 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
PTCD2-209ENST00000511752 ZNF277Q9NRM2 450 aaPredicted RBP15.81■□□□□ 0.12
PTCD2-209ENST00000511752 C9orf78Q9NZ63 289 aaPredicted RBP15.81■□□□□ 0.12
PTCD2-209ENST00000511752 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
PTCD2-209ENST00000511752 RARSP54136 660 aaKnown RBP15.8■□□□□ 0.12
PTCD2-209ENST00000511752 CASP7P55210 303 aa15.8■□□□□ 0.12
PTCD2-209ENST00000511752 DPY19L2Q6NUT2 758 aa15.8■□□□□ 0.12
PTCD2-209ENST00000511752 DPP8Q6V1X1 898 aaPredicted RBP15.8■□□□□ 0.12
PTCD2-209ENST00000511752 MPNDQ8N594 471 aa15.8■□□□□ 0.12
PTCD2-209ENST00000511752 TTLL11Q8NHH1 800 aa15.8■□□□□ 0.12
PTCD2-209ENST00000511752 CCDC85AQ96PX6 553 aaPredicted RBP15.8■□□□□ 0.12
PTCD2-209ENST00000511752 SEC31BQ9NQW1 1179 aa15.8■□□□□ 0.12
PTCD2-209ENST00000511752 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
PTCD2-209ENST00000511752 GRM8O00222 908 aa15.79■□□□□ 0.12
PTCD2-209ENST00000511752 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
PTCD2-209ENST00000511752 ANKRD18AQ8IVF6 992 aa15.79■□□□□ 0.12
PTCD2-209ENST00000511752 CDC5LQ99459 802 aaKnown RBP15.79■□□□□ 0.12
PTCD2-209ENST00000511752 RTL9Q8NET4 1388 aa15.78■□□□□ 0.12
PTCD2-209ENST00000511752 SLC51AQ86UW1 340 aa15.78■□□□□ 0.12
PTCD2-209ENST00000511752 JDP2Q8WYK2 163 aa15.78■□□□□ 0.12
PTCD2-209ENST00000511752 API5Q9BZZ5 524 aaKnown RBP15.78■□□□□ 0.12
PTCD2-209ENST00000511752 VPS33BQ9H267 617 aa15.78■□□□□ 0.12
PTCD2-209ENST00000511752 NOB1Q9ULX3 412 aaKnown RBP15.78■□□□□ 0.12
PTCD2-209ENST00000511752 COL4A1P02462 1669 aa15.77■□□□□ 0.12
PTCD2-209ENST00000511752 GLTPD2A6NH11 291 aa15.77■□□□□ 0.12
PTCD2-209ENST00000511752 RTFDC1Q9BY42 306 aaPredicted RBP15.77■□□□□ 0.12
PTCD2-209ENST00000511752 GREM2Q9H772 168 aa15.77■□□□□ 0.12
PTCD2-209ENST00000511752 SPEF2Q9C093 1822 aa15.77■□□□□ 0.11
PTCD2-209ENST00000511752 CSF1RP07333 972 aa15.76■□□□□ 0.11
PTCD2-209ENST00000511752 LARGE2Q8N3Y3 721 aa15.76■□□□□ 0.11
PTCD2-209ENST00000511752 NSFL1CQ9UNZ2 370 aaKnown RBP15.76■□□□□ 0.11
PTCD2-209ENST00000511752 IPO8O15397 1037 aaKnown RBP15.75■□□□□ 0.11
PTCD2-209ENST00000511752 PPIP5K2O43314 1243 aa15.75■□□□□ 0.11
PTCD2-209ENST00000511752 IGHMBP2P38935 993 aaKnown RBP15.75■□□□□ 0.11
PTCD2-209ENST00000511752 CCT4P50991 539 aaKnown RBP15.75■□□□□ 0.11
PTCD2-209ENST00000511752 NIM1KQ8IY84 436 aa15.75■□□□□ 0.11
PTCD2-209ENST00000511752 ARHGAP45Q92619 1136 aa15.75■□□□□ 0.11
PTCD2-209ENST00000511752 NMRK2Q9NPI5 230 aa15.75■□□□□ 0.11
PTCD2-209ENST00000511752 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
PTCD2-209ENST00000511752 UTYO14607 1347 aa15.74■□□□□ 0.11
PTCD2-209ENST00000511752 ITGA6P23229 1130 aa15.74■□□□□ 0.11
PTCD2-209ENST00000511752 GPSM2P81274 684 aa15.74■□□□□ 0.11
PTCD2-209ENST00000511752 FOXO4P98177 505 aa15.74■□□□□ 0.11
PTCD2-209ENST00000511752 AOC3Q16853 763 aa15.74■□□□□ 0.11
PTCD2-209ENST00000511752 FAM161AQ3B820 660 aa15.74■□□□□ 0.11
PTCD2-209ENST00000511752 BSDC1Q9NW68 430 aaPredicted RBP15.74■□□□□ 0.11
PTCD2-209ENST00000511752 ANKIB1Q9P2G1 1089 aa15.74■□□□□ 0.11
PTCD2-209ENST00000511752 DUOX1Q9NRD9 1551 aa15.74■□□□□ 0.11
PTCD2-209ENST00000511752 ANKRD18BA2A2Z9 1011 aa15.73■□□□□ 0.11
PTCD2-209ENST00000511752 C6orf229H3BNL8 230 aa15.73■□□□□ 0.11
PTCD2-209ENST00000511752 FZD9O00144 591 aa15.73■□□□□ 0.11
PTCD2-209ENST00000511752 KIF3CO14782 793 aa15.73■□□□□ 0.11
PTCD2-209ENST00000511752 NBPF7P0C2Y1 421 aaPredicted RBP15.73■□□□□ 0.11
PTCD2-209ENST00000511752 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
PTCD2-209ENST00000511752 IFIT5Q13325 482 aaKnown RBP15.73■□□□□ 0.11
PTCD2-209ENST00000511752 EYA3Q99504 573 aa15.73■□□□□ 0.11
PTCD2-209ENST00000511752 RRAGCQ9HB90 399 aa15.73■□□□□ 0.11
PTCD2-209ENST00000511752 LTBP1Q14766 1721 aa15.73■□□□□ 0.11
PTCD2-209ENST00000511752 WDR90Q96KV7 1748 aa15.73■□□□□ 0.11
PTCD2-209ENST00000511752 BCAR3O75815 825 aa15.72■□□□□ 0.11
PTCD2-209ENST00000511752 KIAA2012Q0VF49 1180 aa15.72■□□□□ 0.11
PTCD2-209ENST00000511752 WASHC4Q2M389 1173 aa15.72■□□□□ 0.11
PTCD2-209ENST00000511752 LMBR1LQ6UX01 489 aa15.72■□□□□ 0.11
PTCD2-209ENST00000511752 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
PTCD2-209ENST00000511752 FRAT1Q92837 279 aaPredicted RBP15.72■□□□□ 0.11
PTCD2-209ENST00000511752 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
PTCD2-209ENST00000511752 PODXL2Q9NZ53 605 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms