RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TIAM2Q8IVF5 1701 aa21.17■□□□□ 0.98
SNCA-209ENST00000506244 MYH3P11055 1940 aa21.17■□□□□ 0.98
SNCA-209ENST00000506244 KIF16BQ96L93 1317 aa21.16■□□□□ 0.98
SNCA-209ENST00000506244 ALDH1L1O75891 902 aa21.16■□□□□ 0.98
SNCA-209ENST00000506244 FKBP4Q02790 459 aaKnown RBP eCLIP21.16■□□□□ 0.98
SNCA-209ENST00000506244 BEND3Q5T5X7 828 aa21.16■□□□□ 0.98
SNCA-209ENST00000506244 UBE3BQ7Z3V4 1068 aa21.16■□□□□ 0.98
SNCA-209ENST00000506244 CTSWP56202 376 aa21.15■□□□□ 0.98
SNCA-209ENST00000506244 SLC4A10Q6U841 1118 aa21.15■□□□□ 0.98
SNCA-209ENST00000506244 SRCIN1Q9C0H9 1055 aa21.15■□□□□ 0.98
SNCA-209ENST00000506244 ATP6V0A2Q9Y487 856 aa21.15■□□□□ 0.98
SNCA-209ENST00000506244 H7C1W4 665 aa21.14■□□□□ 0.97
SNCA-209ENST00000506244 BRPF1P55201 1214 aaPredicted RBP21.14■□□□□ 0.97
SNCA-209ENST00000506244 PSMD1Q99460 953 aa21.14■□□□□ 0.97
SNCA-209ENST00000506244 SNED1Q8TER0 1413 aa21.13■□□□□ 0.97
SNCA-209ENST00000506244 LRRC37AA6NMS7 1700 aa21.13■□□□□ 0.97
SNCA-209ENST00000506244 DICER1Q9UPY3 1922 aaKnown RBP21.13■□□□□ 0.97
SNCA-209ENST00000506244 CCDC88AQ3V6T2 1871 aa21.12■□□□□ 0.97
SNCA-209ENST00000506244 RARSP54136 660 aaKnown RBP21.12■□□□□ 0.97
SNCA-209ENST00000506244 JARID2Q92833 1246 aaPredicted RBP21.12■□□□□ 0.97
SNCA-209ENST00000506244 PLA2G12BQ9BX93 195 aa21.12■□□□□ 0.97
SNCA-209ENST00000506244 RTL9Q8NET4 1388 aa21.11■□□□□ 0.97
SNCA-209ENST00000506244 GRM8O00222 908 aa21.11■□□□□ 0.97
SNCA-209ENST00000506244 OLFM4Q6UX06 510 aa21.11■□□□□ 0.97
SNCA-209ENST00000506244 SP8Q8IXZ3 490 aa21.11■□□□□ 0.97
SNCA-209ENST00000506244 GPBP1L1Q9HC44 474 aaPredicted RBP21.11■□□□□ 0.97
SNCA-209ENST00000506244 C9orf78Q9NZ63 289 aaPredicted RBP21.11■□□□□ 0.97
SNCA-209ENST00000506244 SUPT20HQ8NEM7 779 aa21.1■□□□□ 0.97
SNCA-209ENST00000506244 CDC5LQ99459 802 aaKnown RBP21.1■□□□□ 0.97
SNCA-209ENST00000506244 API5Q9BZZ5 524 aaKnown RBP21.1■□□□□ 0.97
SNCA-209ENST00000506244 KDM2BQ8NHM5 1336 aa21.09■□□□□ 0.97
SNCA-209ENST00000506244 PRELPP51888 382 aa21.09■□□□□ 0.97
SNCA-209ENST00000506244 CASP7P55210 303 aa21.09■□□□□ 0.97
SNCA-209ENST00000506244 CELF1Q92879 486 aaKnown RBP21.09■□□□□ 0.97
SNCA-209ENST00000506244 IARSP41252 1262 aaKnown RBP21.08■□□□□ 0.97
SNCA-209ENST00000506244 RPS8P62241 208 aaKnown RBP21.08■□□□□ 0.97
SNCA-209ENST00000506244 DPP8Q6V1X1 898 aaPredicted RBP21.08■□□□□ 0.97
SNCA-209ENST00000506244 TTLL11Q8NHH1 800 aa21.08■□□□□ 0.97
SNCA-209ENST00000506244 ZNF277Q9NRM2 450 aaPredicted RBP21.08■□□□□ 0.97
SNCA-209ENST00000506244 TAF1P21675 1872 aa21.07■□□□□ 0.96
SNCA-209ENST00000506244 IPO8O15397 1037 aaKnown RBP21.07■□□□□ 0.96
SNCA-209ENST00000506244 CCT4P50991 539 aaKnown RBP21.07■□□□□ 0.96
SNCA-209ENST00000506244 ANKRD18AQ8IVF6 992 aa21.07■□□□□ 0.96
SNCA-209ENST00000506244 ZNF526Q8TF50 670 aaPredicted RBP21.07■□□□□ 0.96
SNCA-209ENST00000506244 ARHGAP45Q92619 1136 aa21.07■□□□□ 0.96
SNCA-209ENST00000506244 NOB1Q9ULX3 412 aaKnown RBP21.07■□□□□ 0.96
SNCA-209ENST00000506244 MPNDQ8N594 471 aa21.06■□□□□ 0.96
SNCA-209ENST00000506244 CCDC85AQ96PX6 553 aaPredicted RBP21.06■□□□□ 0.96
SNCA-209ENST00000506244 VPS33BQ9H267 617 aa21.06■□□□□ 0.96
SNCA-209ENST00000506244 SEC31BQ9NQW1 1179 aa21.06■□□□□ 0.96
SNCA-209ENST00000506244 DPY19L2Q6NUT2 758 aa21.05■□□□□ 0.96
SNCA-209ENST00000506244 JDP2Q8WYK2 163 aa21.05■□□□□ 0.96
SNCA-209ENST00000506244 RTFDC1Q9BY42 306 aaPredicted RBP21.05■□□□□ 0.96
SNCA-209ENST00000506244 GREM2Q9H772 168 aa21.05■□□□□ 0.96
SNCA-209ENST00000506244 UTYO14607 1347 aa21.04■□□□□ 0.96
SNCA-209ENST00000506244 COL4A1P02462 1669 aa21.03■□□□□ 0.96
SNCA-209ENST00000506244 CSF1RP07333 972 aa21.03■□□□□ 0.96
SNCA-209ENST00000506244 IGHMBP2P38935 993 aaKnown RBP21.03■□□□□ 0.96
SNCA-209ENST00000506244 FAM161AQ3B820 660 aa21.03■□□□□ 0.96
SNCA-209ENST00000506244 LARGE2Q8N3Y3 721 aa21.03■□□□□ 0.96
SNCA-209ENST00000506244 DUOX1Q9NRD9 1551 aa21.02■□□□□ 0.96
SNCA-209ENST00000506244 GLTPD2A6NH11 291 aa21.02■□□□□ 0.96
SNCA-209ENST00000506244 PPIP5K2O43314 1243 aa21.02■□□□□ 0.96
SNCA-209ENST00000506244 ITGA6P23229 1130 aa21.02■□□□□ 0.96
SNCA-209ENST00000506244 CHMP3Q9Y3E7 222 aa21.02■□□□□ 0.96
SNCA-209ENST00000506244 LTBP1Q14766 1721 aa21.01■□□□□ 0.95
SNCA-209ENST00000506244 ANKRD18BA2A2Z9 1011 aa21.01■□□□□ 0.95
SNCA-209ENST00000506244 FOXO4P98177 505 aa21.01■□□□□ 0.95
SNCA-209ENST00000506244 IFIT5Q13325 482 aaKnown RBP21.01■□□□□ 0.95
SNCA-209ENST00000506244 SLC51AQ86UW1 340 aa21.01■□□□□ 0.95
SNCA-209ENST00000506244 NIM1KQ8IY84 436 aa21.01■□□□□ 0.95
SNCA-209ENST00000506244 BSDC1Q9NW68 430 aaPredicted RBP21.01■□□□□ 0.95
SNCA-209ENST00000506244 NSFL1CQ9UNZ2 370 aaKnown RBP21.01■□□□□ 0.95
SNCA-209ENST00000506244 SPEF2Q9C093 1822 aa21.01■□□□□ 0.95
SNCA-209ENST00000506244 FRAT1Q92837 279 aaPredicted RBP21■□□□□ 0.95
SNCA-209ENST00000506244 EYA3Q99504 573 aa21■□□□□ 0.95
SNCA-209ENST00000506244 MPHOSPH8Q99549 860 aa21■□□□□ 0.95
SNCA-209ENST00000506244 PODXL2Q9NZ53 605 aa21■□□□□ 0.95
SNCA-209ENST00000506244 ANKIB1Q9P2G1 1089 aa21■□□□□ 0.95
SNCA-209ENST00000506244 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
SNCA-209ENST00000506244 XDHP47989 1333 aa21■□□□□ 0.95
SNCA-209ENST00000506244 BCAR3O75815 825 aa20.99■□□□□ 0.95
SNCA-209ENST00000506244 NBPF7P0C2Y1 421 aaPredicted RBP20.99■□□□□ 0.95
SNCA-209ENST00000506244 KIAA2012Q0VF49 1180 aa20.99■□□□□ 0.95
SNCA-209ENST00000506244 AOC3Q16853 763 aa20.99■□□□□ 0.95
SNCA-209ENST00000506244 CCDC57Q2TAC2 916 aa20.99■□□□□ 0.95
SNCA-209ENST00000506244 LMBR1LQ6UX01 489 aa20.99■□□□□ 0.95
SNCA-209ENST00000506244 ATF7IPQ6VMQ6 1270 aa20.99■□□□□ 0.95
SNCA-209ENST00000506244 WDR90Q96KV7 1748 aa20.98■□□□□ 0.95
SNCA-209ENST00000506244 FZD9O00144 591 aa20.98■□□□□ 0.95
SNCA-209ENST00000506244 EIF6P56537 245 aaKnown RBP20.98■□□□□ 0.95
SNCA-209ENST00000506244 GPSM2P81274 684 aa20.98■□□□□ 0.95
SNCA-209ENST00000506244 ZKSCAN2Q63HK3 967 aa20.98■□□□□ 0.95
SNCA-209ENST00000506244 SUCLG2Q96I99 432 aa20.98■□□□□ 0.95
SNCA-209ENST00000506244 GGA1Q9UJY5 639 aa20.98■□□□□ 0.95
SNCA-209ENST00000506244 C6orf229H3BNL8 230 aa20.97■□□□□ 0.95
SNCA-209ENST00000506244 TRIM27P14373 513 aa20.97■□□□□ 0.95
SNCA-209ENST00000506244 TAF7LQ5H9L4 462 aa20.97■□□□□ 0.95
SNCA-209ENST00000506244 USP44Q9H0E7 712 aa20.97■□□□□ 0.95
SNCA-209ENST00000506244 UFL1O94874 794 aa20.96■□□□□ 0.95
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