RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 FKBP4Q02790 459 aaKnown RBP eCLIP9.23□□□□□ -0.93
ITGA3-203ENST00000504417 SOGA3Q5TF21 947 aa9.23□□□□□ -0.93
ITGA3-203ENST00000504417 G2E3Q7L622 706 aa9.23□□□□□ -0.93
ITGA3-203ENST00000504417 ZNF526Q8TF50 670 aaPredicted RBP9.23□□□□□ -0.93
ITGA3-203ENST00000504417 PSMD1Q99460 953 aa9.23□□□□□ -0.93
ITGA3-203ENST00000504417 ECM29Q5VYK3 1845 aa9.23□□□□□ -0.93
ITGA3-203ENST00000504417 SH3TC1Q8TE82 1336 aa9.23□□□□□ -0.93
ITGA3-203ENST00000504417 PCNTO95613 3336 aa9.22□□□□□ -0.93
ITGA3-203ENST00000504417 GLTPD2A6NH11 291 aa9.22□□□□□ -0.93
ITGA3-203ENST00000504417 VAMP4O75379 141 aa9.22□□□□□ -0.93
ITGA3-203ENST00000504417 IGKV5-2P06315 115 aa9.22□□□□□ -0.93
ITGA3-203ENST00000504417 TWISTNBQ3B726 338 aaPredicted RBP9.22□□□□□ -0.93
ITGA3-203ENST00000504417 CCDC30Q5VVM6 783 aa9.22□□□□□ -0.93
ITGA3-203ENST00000504417 ZNF541Q9H0D2 1346 aa9.22□□□□□ -0.93
ITGA3-203ENST00000504417 MYH13Q9UKX3 1938 aa9.21□□□□□ -0.93
ITGA3-203ENST00000504417 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
ITGA3-203ENST00000504417 NPHP1O15259 732 aa9.21□□□□□ -0.94
ITGA3-203ENST00000504417 HCLS1P14317 486 aaPredicted RBP9.21□□□□□ -0.94
ITGA3-203ENST00000504417 ALDH1B1P30837 517 aa9.21□□□□□ -0.94
ITGA3-203ENST00000504417 SF3B3Q15393 1217 aaKnown RBP9.21□□□□□ -0.94
ITGA3-203ENST00000504417 RASEFQ8IZ41 740 aa9.21□□□□□ -0.94
ITGA3-203ENST00000504417 BBXQ8WY36 941 aaPredicted RBP9.21□□□□□ -0.94
ITGA3-203ENST00000504417 L3MBTL3Q96JM7 780 aaPredicted RBP9.21□□□□□ -0.94
ITGA3-203ENST00000504417 METTL22Q9BUU2 404 aaPredicted RBP9.21□□□□□ -0.94
ITGA3-203ENST00000504417 RTFDC1Q9BY42 306 aaPredicted RBP9.21□□□□□ -0.94
ITGA3-203ENST00000504417 CDHR2Q9BYE9 1310 aa9.21□□□□□ -0.94
ITGA3-203ENST00000504417 THSD7BQ9C0I4 1608 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 CCER2I3L3R5 266 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 FZD9O00144 591 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 PPEF1O14829 653 aaPredicted RBP9.2□□□□□ -0.94
ITGA3-203ENST00000504417 PCCAP05165 728 aaPredicted RBP9.2□□□□□ -0.94
ITGA3-203ENST00000504417 CASP7P55210 303 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 EXOSC9Q06265 439 aaKnown RBP9.2□□□□□ -0.94
ITGA3-203ENST00000504417 GOLGA2Q08379 1002 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 DCAF8Q5TAQ9 597 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 RTKN2Q8IZC4 609 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 FAM9BQ8IZU0 186 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 RBM46Q8TBY0 533 aaKnown RBP9.2□□□□□ -0.94
ITGA3-203ENST00000504417 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
ITGA3-203ENST00000504417 FAM212AQ96EL1 285 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 FAM89AQ96GI7 184 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 RBM17Q96I25 401 aaKnown RBP9.2□□□□□ -0.94
ITGA3-203ENST00000504417 NLRP3Q96P20 1036 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 ZNF277Q9NRM2 450 aaPredicted RBP9.2□□□□□ -0.94
ITGA3-203ENST00000504417 TRMT112Q9UI30 125 aaKnown RBP9.2□□□□□ -0.94
ITGA3-203ENST00000504417 KDM2BQ8NHM5 1336 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 RTL9Q8NET4 1388 aa9.2□□□□□ -0.94
ITGA3-203ENST00000504417 PI4KAP2A4QPH2 592 aa9.19□□□□□ -0.94
ITGA3-203ENST00000504417 GTF2E1P29083 439 aaPredicted RBP9.19□□□□□ -0.94
ITGA3-203ENST00000504417 IARSP41252 1262 aaKnown RBP9.19□□□□□ -0.94
ITGA3-203ENST00000504417 GRAPQ13588 217 aa9.19□□□□□ -0.94
ITGA3-203ENST00000504417 KSR2Q6VAB6 950 aa9.19□□□□□ -0.94
ITGA3-203ENST00000504417 TRMT2AQ8IZ69 625 aaKnown RBP9.19□□□□□ -0.94
ITGA3-203ENST00000504417 PI4KAP1Q8N8J0 262 aa9.19□□□□□ -0.94
ITGA3-203ENST00000504417 ZBTB38Q8NAP3 1195 aaPredicted RBP9.19□□□□□ -0.94
ITGA3-203ENST00000504417 CCDC191Q8NCU4 936 aa9.19□□□□□ -0.94
ITGA3-203ENST00000504417 GRAPLQ8TC17 118 aaPredicted RBP9.19□□□□□ -0.94
ITGA3-203ENST00000504417 RPGRQ92834 1020 aaKnown RBP9.19□□□□□ -0.94
ITGA3-203ENST00000504417 MYD88Q99836 296 aa9.19□□□□□ -0.94
ITGA3-203ENST00000504417 ATP6V0A2Q9Y487 856 aa9.19□□□□□ -0.94
ITGA3-203ENST00000504417 NEURL1BA8MQ27 555 aa9.18□□□□□ -0.94
ITGA3-203ENST00000504417 IRS4O14654 1257 aaPredicted RBP9.18□□□□□ -0.94
ITGA3-203ENST00000504417 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
ITGA3-203ENST00000504417 ZNF609O15014 1411 aa9.18□□□□□ -0.94
ITGA3-203ENST00000504417 TOMM70O94826 608 aa9.18□□□□□ -0.94
ITGA3-203ENST00000504417 FLIIQ13045 1269 aa9.18□□□□□ -0.94
ITGA3-203ENST00000504417 GRIPAP1Q4V328 841 aa9.18□□□□□ -0.94
ITGA3-203ENST00000504417 RIC3Q7Z5B4 369 aa9.18□□□□□ -0.94
ITGA3-203ENST00000504417 CELF1Q92879 486 aaKnown RBP9.18□□□□□ -0.94
ITGA3-203ENST00000504417 ZNF428Q96B54 188 aa9.18□□□□□ -0.94
ITGA3-203ENST00000504417 MAP3K2Q9Y2U5 619 aa9.18□□□□□ -0.94
ITGA3-203ENST00000504417 LAMB1P07942 1786 aa9.17□□□□□ -0.94
ITGA3-203ENST00000504417 CHRM1P11229 460 aaPredicted RBP9.17□□□□□ -0.94
ITGA3-203ENST00000504417 HSPA6P17066 643 aa9.17□□□□□ -0.94
ITGA3-203ENST00000504417 CHADLQ6NUI6 762 aa9.17□□□□□ -0.94
ITGA3-203ENST00000504417 SP8Q8IXZ3 490 aa9.17□□□□□ -0.94
ITGA3-203ENST00000504417 PLA2G12BQ9BX93 195 aa9.17□□□□□ -0.94
ITGA3-203ENST00000504417 CHMP4AQ9BY43 222 aa9.17□□□□□ -0.94
ITGA3-203ENST00000504417 RRAGCQ9HB90 399 aa9.17□□□□□ -0.94
ITGA3-203ENST00000504417 CWC25Q9NXE8 425 aaPredicted RBP9.17□□□□□ -0.94
ITGA3-203ENST00000504417 SALL2Q9Y467 1007 aaPredicted RBP9.17□□□□□ -0.94
ITGA3-203ENST00000504417 H7C1W4 665 aa9.16□□□□□ -0.94
ITGA3-203ENST00000504417 BBOX1O75936 387 aa9.16□□□□□ -0.94
ITGA3-203ENST00000504417 DDNO94850 711 aaPredicted RBP9.16□□□□□ -0.94
ITGA3-203ENST00000504417 DDX58O95786 925 aaKnown RBP9.16□□□□□ -0.94
ITGA3-203ENST00000504417 FXR2P51116 673 aaKnown RBP eCLIP9.16□□□□□ -0.94
ITGA3-203ENST00000504417 SLFN5Q08AF3 891 aa9.16□□□□□ -0.94
ITGA3-203ENST00000504417 CWF19L2Q2TBE0 894 aaKnown RBP9.16□□□□□ -0.94
ITGA3-203ENST00000504417 TMC4Q7Z404 712 aa9.16□□□□□ -0.94
ITGA3-203ENST00000504417 STK31Q9BXU1 1019 aa9.16□□□□□ -0.94
ITGA3-203ENST00000504417 VPS33BQ9H267 617 aa9.16□□□□□ -0.94
ITGA3-203ENST00000504417 PDE8AO60658 829 aa9.15□□□□□ -0.94
ITGA3-203ENST00000504417 POTEIP0CG38 1075 aa9.15□□□□□ -0.94
ITGA3-203ENST00000504417 POTEJP0CG39 1038 aa9.15□□□□□ -0.94
ITGA3-203ENST00000504417 VEGFAP15692 232 aaPredicted RBP9.15□□□□□ -0.94
ITGA3-203ENST00000504417 KIAA2012Q0VF49 1180 aa9.15□□□□□ -0.94
ITGA3-203ENST00000504417 FSTL1Q12841 308 aa9.15□□□□□ -0.94
ITGA3-203ENST00000504417 GCKRQ14397 625 aa9.15□□□□□ -0.94
ITGA3-203ENST00000504417 BEND3Q5T5X7 828 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms