RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 MYD88Q99836 296 aa18.07■□□□□ 0.48
PDLIM7-211ENST00000504318 TAF1DQ9H5J8 278 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-211ENST00000504318 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-211ENST00000504318 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
PDLIM7-211ENST00000504318 VAMP4O75379 141 aa18.05■□□□□ 0.48
PDLIM7-211ENST00000504318 PCCAP05165 728 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-211ENST00000504318 DDX46Q7L014 1031 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-211ENST00000504318 GPC2Q8N158 579 aa18.05■□□□□ 0.48
PDLIM7-211ENST00000504318 VPS33BQ9H267 617 aa18.05■□□□□ 0.48
PDLIM7-211ENST00000504318 MYH3P11055 1940 aa18.05■□□□□ 0.48
PDLIM7-211ENST00000504318 AOC3Q16853 763 aa18.04■□□□□ 0.48
PDLIM7-211ENST00000504318 RTL5Q5HYW3 569 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-211ENST00000504318 KSR2Q6VAB6 950 aa18.04■□□□□ 0.48
PDLIM7-211ENST00000504318 MAP3K2Q9Y2U5 619 aa18.04■□□□□ 0.48
PDLIM7-211ENST00000504318 PASKQ96RG2 1323 aa18.03■□□□□ 0.48
PDLIM7-211ENST00000504318 PI4KAP2A4QPH2 592 aa18.03■□□□□ 0.48
PDLIM7-211ENST00000504318 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
PDLIM7-211ENST00000504318 SCNN1DP51172 638 aa18.03■□□□□ 0.48
PDLIM7-211ENST00000504318 KIAA2012Q0VF49 1180 aa18.03■□□□□ 0.48
PDLIM7-211ENST00000504318 LARGE2Q8N3Y3 721 aa18.03■□□□□ 0.48
PDLIM7-211ENST00000504318 PI4KAP1Q8N8J0 262 aa18.03■□□□□ 0.48
PDLIM7-211ENST00000504318 CDHR2Q9BYE9 1310 aa18.02■□□□□ 0.48
PDLIM7-211ENST00000504318 PCNTO95613 3336 aa18.02■□□□□ 0.48
PDLIM7-211ENST00000504318 CHADLQ6NUI6 762 aa18.02■□□□□ 0.48
PDLIM7-211ENST00000504318 TMC4Q7Z404 712 aa18.02■□□□□ 0.48
PDLIM7-211ENST00000504318 JDP2Q8WYK2 163 aa18.02■□□□□ 0.48
PDLIM7-211ENST00000504318 JARID2Q92833 1246 aaPredicted RBP18.02■□□□□ 0.48
PDLIM7-211ENST00000504318 CHMP4AQ9BY43 222 aa18.02■□□□□ 0.48
PDLIM7-211ENST00000504318 CWC25Q9NXE8 425 aaPredicted RBP18.02■□□□□ 0.48
PDLIM7-211ENST00000504318 SALL2Q9Y467 1007 aaPredicted RBP18.02■□□□□ 0.48
PDLIM7-211ENST00000504318 PPIP5K2O43314 1243 aa18.01■□□□□ 0.47
PDLIM7-211ENST00000504318 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-211ENST00000504318 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
PDLIM7-211ENST00000504318 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-211ENST00000504318 FAM9BQ8IZU0 186 aa18.01■□□□□ 0.47
PDLIM7-211ENST00000504318 MPNDQ8N594 471 aa18.01■□□□□ 0.47
PDLIM7-211ENST00000504318 KLRG1Q96E93 195 aa18.01■□□□□ 0.47
PDLIM7-211ENST00000504318 SEC31BQ9NQW1 1179 aa18.01■□□□□ 0.47
PDLIM7-211ENST00000504318 HACL1Q9UJ83 578 aa18.01■□□□□ 0.47
PDLIM7-211ENST00000504318 YDJCA8MPS7 323 aa18■□□□□ 0.47
PDLIM7-211ENST00000504318 ITGBL1O95965 494 aaPredicted RBP18■□□□□ 0.47
PDLIM7-211ENST00000504318 EPHX2P34913 555 aa18■□□□□ 0.47
PDLIM7-211ENST00000504318 DPP8Q6V1X1 898 aaPredicted RBP18■□□□□ 0.47
PDLIM7-211ENST00000504318 LDHDQ86WU2 507 aa18■□□□□ 0.47
PDLIM7-211ENST00000504318 JMYQ8N9B5 988 aa18■□□□□ 0.47
PDLIM7-211ENST00000504318 SCN9AQ15858 1988 aa18■□□□□ 0.47
PDLIM7-211ENST00000504318 NEURL1BA8MQ27 555 aa17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 PDE8AO60658 829 aa17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 CASP7P55210 303 aa17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 CXCL9Q07325 125 aa17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 FLIIQ13045 1269 aa17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 CWF19L2Q2TBE0 894 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 NIM1KQ8IY84 436 aa17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 SUPT20HQ8NEM7 779 aa17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 POLLQ9UGP5 575 aa17.99■□□□□ 0.47
PDLIM7-211ENST00000504318 EIF6P56537 245 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-211ENST00000504318 RPS8P62241 208 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-211ENST00000504318 GPSM2P81274 684 aa17.98■□□□□ 0.47
PDLIM7-211ENST00000504318 ZNRF3Q9ULT6 936 aa17.98■□□□□ 0.47
PDLIM7-211ENST00000504318 SPEF2Q9C093 1822 aa17.98■□□□□ 0.47
PDLIM7-211ENST00000504318 H7C1W4 665 aa17.97■□□□□ 0.47
PDLIM7-211ENST00000504318 EPS15P42566 896 aa17.97■□□□□ 0.47
PDLIM7-211ENST00000504318 PODXL2Q9NZ53 605 aa17.97■□□□□ 0.47
PDLIM7-211ENST00000504318 ZNF646O15015 1829 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-211ENST00000504318 PSME4Q14997 1843 aa17.97■□□□□ 0.47
PDLIM7-211ENST00000504318 RTL9Q8NET4 1388 aa17.96■□□□□ 0.47
PDLIM7-211ENST00000504318 TTLL11Q8NHH1 800 aa17.96■□□□□ 0.47
PDLIM7-211ENST00000504318 CTSWP56202 376 aa17.95■□□□□ 0.46
PDLIM7-211ENST00000504318 GCKRQ14397 625 aa17.95■□□□□ 0.46
PDLIM7-211ENST00000504318 CCDC152Q4G0S7 254 aa17.95■□□□□ 0.46
PDLIM7-211ENST00000504318 PNMA8AQ86V59 439 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-211ENST00000504318 PLA2G12BQ9BX93 195 aa17.95■□□□□ 0.46
PDLIM7-211ENST00000504318 GPRC5DQ9NZD1 345 aa17.95■□□□□ 0.46
PDLIM7-211ENST00000504318 GJA3Q9Y6H8 435 aa17.95■□□□□ 0.46
PDLIM7-211ENST00000504318 EAPPQ56P03 285 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-211ENST00000504318 TBC1D16Q8TBP0 767 aa17.94■□□□□ 0.46
PDLIM7-211ENST00000504318 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
PDLIM7-211ENST00000504318 TMX4Q9H1E5 349 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-211ENST00000504318 CREBZFQ9NS37 354 aa17.94■□□□□ 0.46
PDLIM7-211ENST00000504318 GPR101Q96P66 508 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-211ENST00000504318 CCDC85AQ96PX6 553 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-211ENST00000504318 NSFL1CQ9UNZ2 370 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-211ENST00000504318 A0A1B0GUL6 1792 aa17.93■□□□□ 0.46
PDLIM7-211ENST00000504318 HSP90B1P14625 803 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-211ENST00000504318 MAP1SQ66K74 1059 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-211ENST00000504318 CIAPIN1Q6FI81 312 aa17.92■□□□□ 0.46
PDLIM7-211ENST00000504318 LINS1Q8NG48 757 aa17.92■□□□□ 0.46
PDLIM7-211ENST00000504318 MYH16Q9H6N6 1097 aa17.92■□□□□ 0.46
PDLIM7-211ENST00000504318 GREM2Q9H772 168 aa17.92■□□□□ 0.46
PDLIM7-211ENST00000504318 TRPM7Q96QT4 1865 aa17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 SHTN1A0MZ66 631 aa17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 WTIPA6NIX2 430 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 F6X3S4 739 aa17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 RAD17O75943 681 aa17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 CSF1RP07333 972 aa17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 GMPSP49915 693 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 NEXNQ0ZGT2 675 aa17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 FKBP5Q13451 457 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-211ENST00000504318 WASHC4Q2M389 1173 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms