RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 UBE3BQ7Z3V4 1068 aa24.4■■□□□ 1.5
CTDSP1-213ENST00000496785 SRCIN1Q9C0H9 1055 aa24.4■■□□□ 1.5
CTDSP1-213ENST00000496785 RNF181Q9P0P0 153 aa24.4■■□□□ 1.5
CTDSP1-213ENST00000496785 ZC3H4Q9UPT8 1303 aaKnown RBP24.39■■□□□ 1.5
CTDSP1-213ENST00000496785 FER1L6Q2WGJ9 1857 aa24.38■■□□□ 1.49
CTDSP1-213ENST00000496785 RARSP54136 660 aaKnown RBP24.38■■□□□ 1.49
CTDSP1-213ENST00000496785 FKBP4Q02790 459 aaKnown RBP eCLIP24.38■■□□□ 1.492e-6■■■■□ 25.6
CTDSP1-213ENST00000496785 ATP6V0A2Q9Y487 856 aa24.37■■□□□ 1.49
CTDSP1-213ENST00000496785 CTSWP56202 376 aa24.36■■□□□ 1.49
CTDSP1-213ENST00000496785 ZNF784Q8NCA9 323 aaPredicted RBP24.36■■□□□ 1.49
CTDSP1-213ENST00000496785 PLA2G12BQ9BX93 195 aa24.36■■□□□ 1.49
CTDSP1-213ENST00000496785 API5Q9BZZ5 524 aaKnown RBP24.36■■□□□ 1.49
CTDSP1-213ENST00000496785 UTRNP46939 3433 aa24.36■■□□□ 1.49
CTDSP1-213ENST00000496785 SP8Q8IXZ3 490 aa24.35■■□□□ 1.49
CTDSP1-213ENST00000496785 JARID2Q92833 1246 aaPredicted RBP24.35■■□□□ 1.49
CTDSP1-213ENST00000496785 PSMD1Q99460 953 aa24.35■■□□□ 1.49
CTDSP1-213ENST00000496785 C9orf78Q9NZ63 289 aaPredicted RBP24.35■■□□□ 1.49
CTDSP1-213ENST00000496785 SBF1O95248 1867 aa24.34■■□□□ 1.49
CTDSP1-213ENST00000496785 GRM8O00222 908 aa24.34■■□□□ 1.49
CTDSP1-213ENST00000496785 IPO8O15397 1037 aaKnown RBP24.33■■□□□ 1.49
CTDSP1-213ENST00000496785 CDC5LQ99459 802 aaKnown RBP24.33■■□□□ 1.49
CTDSP1-213ENST00000496785 NOB1Q9ULX3 412 aaKnown RBP24.33■■□□□ 1.49
CTDSP1-213ENST00000496785 RTL9Q8NET4 1388 aa24.32■■□□□ 1.48
CTDSP1-213ENST00000496785 CASP7P55210 303 aa24.32■■□□□ 1.48
CTDSP1-213ENST00000496785 RPS8P62241 208 aaKnown RBP24.32■■□□□ 1.48
CTDSP1-213ENST00000496785 SUPT20HQ8NEM7 779 aa24.32■■□□□ 1.48
CTDSP1-213ENST00000496785 ARHGAP45Q92619 1136 aa24.32■■□□□ 1.48
CTDSP1-213ENST00000496785 MYH3P11055 1940 aa24.31■■□□□ 1.48
CTDSP1-213ENST00000496785 CCT4P50991 539 aaKnown RBP24.31■■□□□ 1.48
CTDSP1-213ENST00000496785 OLFM4Q6UX06 510 aa24.31■■□□□ 1.48
CTDSP1-213ENST00000496785 TTLL11Q8NHH1 800 aa24.31■■□□□ 1.48
CTDSP1-213ENST00000496785 SNED1Q8TER0 1413 aa24.31■■□□□ 1.48
CTDSP1-213ENST00000496785 ANKRD18AQ8IVF6 992 aa24.3■■□□□ 1.48
CTDSP1-213ENST00000496785 CELF1Q92879 486 aaKnown RBP24.3■■□□□ 1.48
CTDSP1-213ENST00000496785 DPP8Q6V1X1 898 aaPredicted RBP24.29■■□□□ 1.48
CTDSP1-213ENST00000496785 MPNDQ8N594 471 aa24.29■■□□□ 1.48
CTDSP1-213ENST00000496785 VPS33BQ9H267 617 aa24.29■■□□□ 1.48
CTDSP1-213ENST00000496785 GPBP1L1Q9HC44 474 aaPredicted RBP24.29■■□□□ 1.48
CTDSP1-213ENST00000496785 IARSP41252 1262 aaKnown RBP24.28■■□□□ 1.48
CTDSP1-213ENST00000496785 CCDC85AQ96PX6 553 aaPredicted RBP24.28■■□□□ 1.48
CTDSP1-213ENST00000496785 SEC31BQ9NQW1 1179 aa24.28■■□□□ 1.48
CTDSP1-213ENST00000496785 KDM2BQ8NHM5 1336 aa24.28■■□□□ 1.48
CTDSP1-213ENST00000496785 LRRC37AA6NMS7 1700 aa24.27■■□□□ 1.48
CTDSP1-213ENST00000496785 TIAM2Q8IVF5 1701 aa24.27■■□□□ 1.48
CTDSP1-213ENST00000496785 PRELPP51888 382 aa24.27■■□□□ 1.48
CTDSP1-213ENST00000496785 ZNF277Q9NRM2 450 aaPredicted RBP24.27■■□□□ 1.48
CTDSP1-213ENST00000496785 DICER1Q9UPY3 1922 aaKnown RBP24.27■■□□□ 1.48
CTDSP1-213ENST00000496785 CCDC88AQ3V6T2 1871 aa24.26■■□□□ 1.47
CTDSP1-213ENST00000496785 CSF1RP07333 972 aa24.26■■□□□ 1.47
CTDSP1-213ENST00000496785 DPY19L2Q6NUT2 758 aa24.26■■□□□ 1.47
CTDSP1-213ENST00000496785 RTFDC1Q9BY42 306 aaPredicted RBP24.26■■□□□ 1.47
CTDSP1-213ENST00000496785 GREM2Q9H772 168 aa24.26■■□□□ 1.47
CTDSP1-213ENST00000496785 UTYO14607 1347 aa24.26■■□□□ 1.47
CTDSP1-213ENST00000496785 IGHMBP2P38935 993 aaKnown RBP24.25■■□□□ 1.47
CTDSP1-213ENST00000496785 JDP2Q8WYK2 163 aa24.25■■□□□ 1.47
CTDSP1-213ENST00000496785 HDAC5Q9UQL6 1122 aa24.25■■□□□ 1.47
CTDSP1-213ENST00000496785 ITGA6P23229 1130 aa24.24■■□□□ 1.47
CTDSP1-213ENST00000496785 ZNF526Q8TF50 670 aaPredicted RBP24.24■■□□□ 1.47
CTDSP1-213ENST00000496785 FRAT1Q92837 279 aaPredicted RBP24.24■■□□□ 1.47
CTDSP1-213ENST00000496785 TAF1P21675 1872 aa24.24■■□□□ 1.47
CTDSP1-213ENST00000496785 ANKRD18BA2A2Z9 1011 aa24.23■■□□□ 1.47
CTDSP1-213ENST00000496785 BCAR3O75815 825 aa24.23■■□□□ 1.47
CTDSP1-213ENST00000496785 IFIT5Q13325 482 aaKnown RBP24.23■■□□□ 1.47
CTDSP1-213ENST00000496785 ATF7IPQ6VMQ6 1270 aa24.23■■□□□ 1.47
CTDSP1-213ENST00000496785 LARGE2Q8N3Y3 721 aa24.23■■□□□ 1.47
CTDSP1-213ENST00000496785 NSFL1CQ9UNZ2 370 aaKnown RBP24.23■■□□□ 1.47
CTDSP1-213ENST00000496785 CHMP3Q9Y3E7 222 aa24.23■■□□□ 1.47
CTDSP1-213ENST00000496785 GLTPD2A6NH11 291 aa24.22■■□□□ 1.47
CTDSP1-213ENST00000496785 FOXO4P98177 505 aa24.22■■□□□ 1.47
CTDSP1-213ENST00000496785 FAM161AQ3B820 660 aa24.22■■□□□ 1.47
CTDSP1-213ENST00000496785 ZKSCAN2Q63HK3 967 aa24.22■■□□□ 1.47
CTDSP1-213ENST00000496785 BSDC1Q9NW68 430 aaPredicted RBP24.22■■□□□ 1.47
CTDSP1-213ENST00000496785 PPIP5K2O43314 1243 aa24.21■■□□□ 1.47
CTDSP1-213ENST00000496785 NBPF7P0C2Y1 421 aaPredicted RBP24.21■■□□□ 1.47
CTDSP1-213ENST00000496785 CCDC57Q2TAC2 916 aa24.21■■□□□ 1.47
CTDSP1-213ENST00000496785 LMBR1LQ6UX01 489 aa24.21■■□□□ 1.47
CTDSP1-213ENST00000496785 EYA3Q99504 573 aa24.21■■□□□ 1.47
CTDSP1-213ENST00000496785 MPHOSPH8Q99549 860 aa24.21■■□□□ 1.47
CTDSP1-213ENST00000496785 PODXL2Q9NZ53 605 aa24.21■■□□□ 1.47
CTDSP1-213ENST00000496785 NIM1KQ8IY84 436 aa24.2■■□□□ 1.46
CTDSP1-213ENST00000496785 SUCLG2Q96I99 432 aa24.2■■□□□ 1.46
CTDSP1-213ENST00000496785 USP44Q9H0E7 712 aa24.2■■□□□ 1.46
CTDSP1-213ENST00000496785 ANKIB1Q9P2G1 1089 aa24.2■■□□□ 1.46
CTDSP1-213ENST00000496785 XDHP47989 1333 aa24.19■■□□□ 1.46
CTDSP1-213ENST00000496785 TRIM27P14373 513 aa24.19■■□□□ 1.46
CTDSP1-213ENST00000496785 INTS3Q68E01 1043 aaKnown RBP24.19■■□□□ 1.46
CTDSP1-213ENST00000496785 C6orf229H3BNL8 230 aa24.18■■□□□ 1.46
CTDSP1-213ENST00000496785 UBTFL1P0CB47 393 aaPredicted RBP24.18■■□□□ 1.46
CTDSP1-213ENST00000496785 GPSM2P81274 684 aa24.18■■□□□ 1.46
CTDSP1-213ENST00000496785 KIAA2012Q0VF49 1180 aa24.18■■□□□ 1.46
CTDSP1-213ENST00000496785 TAF7LQ5H9L4 462 aa24.18■■□□□ 1.46
CTDSP1-213ENST00000496785 SLC51AQ86UW1 340 aa24.18■■□□□ 1.46
CTDSP1-213ENST00000496785 GGA1Q9UJY5 639 aa24.18■■□□□ 1.46
CTDSP1-213ENST00000496785 COL4A1P02462 1669 aa24.18■■□□□ 1.46
CTDSP1-213ENST00000496785 EIF6P56537 245 aaKnown RBP24.17■■□□□ 1.46
CTDSP1-213ENST00000496785 AOC3Q16853 763 aa24.17■■□□□ 1.46
CTDSP1-213ENST00000496785 EPHA10Q5JZY3 1008 aa24.17■■□□□ 1.46
CTDSP1-213ENST00000496785 FZD9O00144 591 aa24.16■■□□□ 1.46
CTDSP1-213ENST00000496785 ATP2B4P23634 1241 aa24.16■■□□□ 1.46
CTDSP1-213ENST00000496785 WASHC4Q2M389 1173 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms