RNA–Protein interactions for RNA: ENST00000495805.5

PSMB4-207, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 811 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-207ENST00000495805 BCL2L13Q9BXK5 485 aa17.11■□□□□ 0.33
PSMB4-207ENST00000495805 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
PSMB4-207ENST00000495805 ATP6V0A2Q9Y487 856 aa17.11■□□□□ 0.33
PSMB4-207ENST00000495805 ZC3H4Q9UPT8 1303 aaKnown RBP17.11■□□□□ 0.33
PSMB4-207ENST00000495805 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
PSMB4-207ENST00000495805 ALDH1L1O75891 902 aa17.1■□□□□ 0.33
PSMB4-207ENST00000495805 RARSP54136 660 aaKnown RBP17.1■□□□□ 0.33
PSMB4-207ENST00000495805 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
PSMB4-207ENST00000495805 SP8Q8IXZ3 490 aa17.1■□□□□ 0.33
PSMB4-207ENST00000495805 CTSWP56202 376 aa17.09■□□□□ 0.33
PSMB4-207ENST00000495805 PSMD1Q99460 953 aa17.09■□□□□ 0.33
PSMB4-207ENST00000495805 C9orf78Q9NZ63 289 aaPredicted RBP17.09■□□□□ 0.33
PSMB4-207ENST00000495805 FER1L6Q2WGJ9 1857 aa17.08■□□□□ 0.33
PSMB4-207ENST00000495805 LAMB2P55268 1798 aa17.08■□□□□ 0.33
PSMB4-207ENST00000495805 KIF16BQ96L93 1317 aa17.08■□□□□ 0.32
PSMB4-207ENST00000495805 RPS8P62241 208 aaKnown RBP17.08■□□□□ 0.32
PSMB4-207ENST00000495805 OLFM4Q6UX06 510 aa17.08■□□□□ 0.32
PSMB4-207ENST00000495805 GPBP1L1Q9HC44 474 aaPredicted RBP17.08■□□□□ 0.32
PSMB4-207ENST00000495805 GRM8O00222 908 aa17.07■□□□□ 0.32
PSMB4-207ENST00000495805 SUPT20HQ8NEM7 779 aa17.07■□□□□ 0.32
PSMB4-207ENST00000495805 PLA2G12BQ9BX93 195 aa17.07■□□□□ 0.32
PSMB4-207ENST00000495805 API5Q9BZZ5 524 aaKnown RBP17.07■□□□□ 0.32
PSMB4-207ENST00000495805 NOB1Q9ULX3 412 aaKnown RBP17.07■□□□□ 0.32
PSMB4-207ENST00000495805 KDM2BQ8NHM5 1336 aa17.06■□□□□ 0.32
PSMB4-207ENST00000495805 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
PSMB4-207ENST00000495805 TTLL11Q8NHH1 800 aa17.06■□□□□ 0.32
PSMB4-207ENST00000495805 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
PSMB4-207ENST00000495805 PRELPP51888 382 aa17.05■□□□□ 0.32
PSMB4-207ENST00000495805 CASP7P55210 303 aa17.05■□□□□ 0.32
PSMB4-207ENST00000495805 DPY19L2Q6NUT2 758 aa17.05■□□□□ 0.32
PSMB4-207ENST00000495805 DPP8Q6V1X1 898 aaPredicted RBP17.05■□□□□ 0.32
PSMB4-207ENST00000495805 MPNDQ8N594 471 aa17.05■□□□□ 0.32
PSMB4-207ENST00000495805 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
PSMB4-207ENST00000495805 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
PSMB4-207ENST00000495805 CELF1Q92879 486 aaKnown RBP17.05■□□□□ 0.32
PSMB4-207ENST00000495805 CCDC85AQ96PX6 553 aaPredicted RBP17.05■□□□□ 0.32
PSMB4-207ENST00000495805 VPS33BQ9H267 617 aa17.05■□□□□ 0.32
PSMB4-207ENST00000495805 SEC31BQ9NQW1 1179 aa17.05■□□□□ 0.32
PSMB4-207ENST00000495805 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
PSMB4-207ENST00000495805 SBF1O95248 1867 aa17.05■□□□□ 0.32
PSMB4-207ENST00000495805 RTL9Q8NET4 1388 aa17.04■□□□□ 0.32
PSMB4-207ENST00000495805 IARSP41252 1262 aaKnown RBP17.04■□□□□ 0.32
PSMB4-207ENST00000495805 CCT4P50991 539 aaKnown RBP17.04■□□□□ 0.32
PSMB4-207ENST00000495805 ANKRD18AQ8IVF6 992 aa17.04■□□□□ 0.32
PSMB4-207ENST00000495805 JDP2Q8WYK2 163 aa17.04■□□□□ 0.32
PSMB4-207ENST00000495805 CSF1RP07333 972 aa17.03■□□□□ 0.32
PSMB4-207ENST00000495805 GREM2Q9H772 168 aa17.03■□□□□ 0.32
PSMB4-207ENST00000495805 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.32
PSMB4-207ENST00000495805 NSFL1CQ9UNZ2 370 aaKnown RBP17.02■□□□□ 0.32
PSMB4-207ENST00000495805 SNED1Q8TER0 1413 aa17.02■□□□□ 0.31
PSMB4-207ENST00000495805 UTYO14607 1347 aa17.01■□□□□ 0.31
PSMB4-207ENST00000495805 GLTPD2A6NH11 291 aa17.01■□□□□ 0.31
PSMB4-207ENST00000495805 IGHMBP2P38935 993 aaKnown RBP17.01■□□□□ 0.31
PSMB4-207ENST00000495805 LARGE2Q8N3Y3 721 aa17.01■□□□□ 0.31
PSMB4-207ENST00000495805 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
PSMB4-207ENST00000495805 ITGA6P23229 1130 aa17■□□□□ 0.31
PSMB4-207ENST00000495805 FOXO4P98177 505 aa17■□□□□ 0.31
PSMB4-207ENST00000495805 IFIT5Q13325 482 aaKnown RBP17■□□□□ 0.31
PSMB4-207ENST00000495805 CCDC88AQ3V6T2 1871 aa17■□□□□ 0.31
PSMB4-207ENST00000495805 FRAT1Q92837 279 aaPredicted RBP17■□□□□ 0.31
PSMB4-207ENST00000495805 BSDC1Q9NW68 430 aaPredicted RBP17■□□□□ 0.31
PSMB4-207ENST00000495805 ANKIB1Q9P2G1 1089 aa17■□□□□ 0.31
PSMB4-207ENST00000495805 HDAC5Q9UQL6 1122 aa17■□□□□ 0.31
PSMB4-207ENST00000495805 CHMP3Q9Y3E7 222 aa17■□□□□ 0.31
PSMB4-207ENST00000495805 MYH3P11055 1940 aa17■□□□□ 0.31
PSMB4-207ENST00000495805 PPIP5K2O43314 1243 aa16.99■□□□□ 0.31
PSMB4-207ENST00000495805 BCAR3O75815 825 aa16.99■□□□□ 0.31
PSMB4-207ENST00000495805 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
PSMB4-207ENST00000495805 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
PSMB4-207ENST00000495805 LMBR1LQ6UX01 489 aa16.99■□□□□ 0.31
PSMB4-207ENST00000495805 MPHOSPH8Q99549 860 aa16.99■□□□□ 0.31
PSMB4-207ENST00000495805 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
PSMB4-207ENST00000495805 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
PSMB4-207ENST00000495805 C6orf229H3BNL8 230 aa16.98■□□□□ 0.31
PSMB4-207ENST00000495805 GPSM2P81274 684 aa16.98■□□□□ 0.31
PSMB4-207ENST00000495805 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
PSMB4-207ENST00000495805 ATF7IPQ6VMQ6 1270 aa16.98■□□□□ 0.31
PSMB4-207ENST00000495805 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
PSMB4-207ENST00000495805 EYA3Q99504 573 aa16.98■□□□□ 0.31
PSMB4-207ENST00000495805 USP44Q9H0E7 712 aa16.98■□□□□ 0.31
PSMB4-207ENST00000495805 PODXL2Q9NZ53 605 aa16.98■□□□□ 0.31
PSMB4-207ENST00000495805 TAF1P21675 1872 aa16.98■□□□□ 0.31
PSMB4-207ENST00000495805 XDHP47989 1333 aa16.97■□□□□ 0.31
PSMB4-207ENST00000495805 LRRC37AA6NMS7 1700 aa16.97■□□□□ 0.31
PSMB4-207ENST00000495805 EIF6P56537 245 aaKnown RBP16.97■□□□□ 0.31
PSMB4-207ENST00000495805 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
PSMB4-207ENST00000495805 AOC3Q16853 763 aa16.97■□□□□ 0.31
PSMB4-207ENST00000495805 WASHC4Q2M389 1173 aa16.97■□□□□ 0.31
PSMB4-207ENST00000495805 TAF7LQ5H9L4 462 aa16.97■□□□□ 0.31
PSMB4-207ENST00000495805 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
PSMB4-207ENST00000495805 SLC51AQ86UW1 340 aa16.97■□□□□ 0.31
PSMB4-207ENST00000495805 GGA1Q9UJY5 639 aa16.97■□□□□ 0.31
PSMB4-207ENST00000495805 FZD9O00144 591 aa16.96■□□□□ 0.31
PSMB4-207ENST00000495805 INTS3Q68E01 1043 aaKnown RBP16.96■□□□□ 0.31
PSMB4-207ENST00000495805 C16orf71Q8IYS4 520 aaPredicted RBP16.96■□□□□ 0.31
PSMB4-207ENST00000495805 SUCLG2Q96I99 432 aa16.96■□□□□ 0.31
PSMB4-207ENST00000495805 ANKRD2Q9GZV1 360 aa16.96■□□□□ 0.31
PSMB4-207ENST00000495805 RRAGCQ9HB90 399 aa16.96■□□□□ 0.31
PSMB4-207ENST00000495805 UBTFL1P0CB47 393 aaPredicted RBP16.95■□□□□ 0.3
PSMB4-207ENST00000495805 TRIM27P14373 513 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms