RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 SCN9AQ15858 1988 aa11.51□□□□□ -0.57
TM4SF1-203ENST00000493298 PLBD2Q8NHP8 589 aa11.51□□□□□ -0.57
TM4SF1-203ENST00000493298 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
TM4SF1-203ENST00000493298 PSME4Q14997 1843 aa11.51□□□□□ -0.57
TM4SF1-203ENST00000493298 PARP10Q53GL7 1025 aa11.5□□□□□ -0.57
TM4SF1-203ENST00000493298 KSR2Q6VAB6 950 aa11.5□□□□□ -0.57
TM4SF1-203ENST00000493298 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
TM4SF1-203ENST00000493298 SIRT2Q8IXJ6 389 aa11.5□□□□□ -0.57
TM4SF1-203ENST00000493298 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
TM4SF1-203ENST00000493298 NYXQ9GZU5 481 aa11.5□□□□□ -0.57
TM4SF1-203ENST00000493298 USP44Q9H0E7 712 aa11.5□□□□□ -0.57
TM4SF1-203ENST00000493298 IPO8O15397 1037 aaKnown RBP11.49□□□□□ -0.57
TM4SF1-203ENST00000493298 IGHDP01880 384 aa11.49□□□□□ -0.57
TM4SF1-203ENST00000493298 AIMP1Q12904 312 aaKnown RBP11.49□□□□□ -0.57
TM4SF1-203ENST00000493298 TRIM28Q13263 835 aaKnown RBP11.49□□□□□ -0.57
TM4SF1-203ENST00000493298 KAZALD1Q96I82 304 aa11.49□□□□□ -0.57
TM4SF1-203ENST00000493298 MEIS3Q99687 375 aa11.49□□□□□ -0.57
TM4SF1-203ENST00000493298 STK31Q9BXU1 1019 aa11.49□□□□□ -0.57
TM4SF1-203ENST00000493298 MAP3K2Q9Y2U5 619 aa11.49□□□□□ -0.57
TM4SF1-203ENST00000493298 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
TM4SF1-203ENST00000493298 CASP7P55210 303 aa11.48□□□□□ -0.57
TM4SF1-203ENST00000493298 FKBP5Q13451 457 aaPredicted RBP11.48□□□□□ -0.57
TM4SF1-203ENST00000493298 ANKRD13DQ6ZTN6 518 aa11.48□□□□□ -0.57
TM4SF1-203ENST00000493298 DNAAF4Q8WXU2 420 aa11.48□□□□□ -0.57
TM4SF1-203ENST00000493298 CRAMP1Q96RY5 1269 aa11.48□□□□□ -0.57
TM4SF1-203ENST00000493298 TAOK3Q9H2K8 898 aa11.48□□□□□ -0.57
TM4SF1-203ENST00000493298 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
TM4SF1-203ENST00000493298 CWF19L2Q2TBE0 894 aaKnown RBP11.47□□□□□ -0.57
TM4SF1-203ENST00000493298 ERICH6BQ5W0A0 696 aa11.47□□□□□ -0.57
TM4SF1-203ENST00000493298 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.47□□□□□ -0.57
TM4SF1-203ENST00000493298 METTL22Q9BUU2 404 aaPredicted RBP11.47□□□□□ -0.57
TM4SF1-203ENST00000493298 UTP14AQ9BVJ6 771 aaKnown RBP11.47□□□□□ -0.57
TM4SF1-203ENST00000493298 UTYO14607 1347 aa11.46□□□□□ -0.57
TM4SF1-203ENST00000493298 KDM2BQ8NHM5 1336 aa11.46□□□□□ -0.57
TM4SF1-203ENST00000493298 NBPF7P0C2Y1 421 aaPredicted RBP11.46□□□□□ -0.57
TM4SF1-203ENST00000493298 HCLS1P14317 486 aaPredicted RBP11.46□□□□□ -0.57
TM4SF1-203ENST00000493298 FKBP4Q02790 459 aaKnown RBP eCLIP11.46□□□□□ -0.57
TM4SF1-203ENST00000493298 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
TM4SF1-203ENST00000493298 PPP1R42Q7Z4L9 355 aa11.46□□□□□ -0.57
TM4SF1-203ENST00000493298 PSMD1Q99460 953 aa11.46□□□□□ -0.57
TM4SF1-203ENST00000493298 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.57
TM4SF1-203ENST00000493298 ZNF541Q9H0D2 1346 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 NEURL1BA8MQ27 555 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 ATP5J2-PTCD1G3V325 749 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 TOMM70O94826 608 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 CCDC93Q567U6 631 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 HSP90AB3PQ58FF7 597 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 EPHA10Q5JZY3 1008 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 ITPRIPQ8IWB1 547 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 JARID2Q92833 1246 aaPredicted RBP11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 PPP4R2Q9NY27 417 aa11.45□□□□□ -0.58
TM4SF1-203ENST00000493298 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 FZD9O00144 591 aa11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 SF3B3Q15393 1217 aaKnown RBP11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 SOGA3Q5TF21 947 aa11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 SLC4A10Q6U841 1118 aa11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 SKAP1Q86WV1 359 aa11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 RRAGCQ9HB90 399 aa11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 TRMT112Q9UI30 125 aaKnown RBP11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 POLR2AP24928 1970 aaKnown RBP11.44□□□□□ -0.58
TM4SF1-203ENST00000493298 NPHP1O15259 732 aa11.43□□□□□ -0.58
TM4SF1-203ENST00000493298 HSPA6P17066 643 aa11.43□□□□□ -0.58
TM4SF1-203ENST00000493298 CCT4P50991 539 aaKnown RBP11.43□□□□□ -0.58
TM4SF1-203ENST00000493298 RTKN2Q8IZC4 609 aa11.43□□□□□ -0.58
TM4SF1-203ENST00000493298 LINS1Q8NG48 757 aa11.43□□□□□ -0.58
TM4SF1-203ENST00000493298 RBM46Q8TBY0 533 aaKnown RBP11.43□□□□□ -0.58
TM4SF1-203ENST00000493298 MYD88Q99836 296 aa11.43□□□□□ -0.58
TM4SF1-203ENST00000493298 DDX19BQ9UMR2 479 aa11.43□□□□□ -0.58
TM4SF1-203ENST00000493298 ATP6V0A2Q9Y487 856 aa11.43□□□□□ -0.58
TM4SF1-203ENST00000493298 H7C1W4 665 aa11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 PPEF1O14829 653 aaPredicted RBP11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 ALDH1L1O75891 902 aa11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 DDNO94850 711 aaPredicted RBP11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 POTEJP0CG39 1038 aa11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 GCKRQ14397 625 aa11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 DNAJC5GQ8N7S2 189 aa11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 CELF1Q92879 486 aaKnown RBP11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 NLRP3Q96P20 1036 aa11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
TM4SF1-203ENST00000493298 TRPM7Q96QT4 1865 aa11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 NEFLP07196 543 aa11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 MS4A1P11836 297 aa11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 RIC3Q7Z5B4 369 aa11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 ZBTB38Q8NAP3 1195 aaPredicted RBP11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 CCDC191Q8NCU4 936 aa11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 RPGRQ92834 1020 aaKnown RBP11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 RBM17Q96I25 401 aaKnown RBP11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 CHMP4AQ9BY43 222 aa11.41□□□□□ -0.58
TM4SF1-203ENST00000493298 PNMA6EA0A0J9YXQ4 647 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms