RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 RNF181Q9P0P0 153 aa19.09■□□□□ 0.65
CXCL12-207ENST00000488591 LTBP3Q9NS15 1303 aa19.08■□□□□ 0.65
CXCL12-207ENST00000488591 NFKBIEO00221 500 aa19.08■□□□□ 0.64
CXCL12-207ENST00000488591 ALDH1L1O75891 902 aa19.08■□□□□ 0.64
CXCL12-207ENST00000488591 RARSP54136 660 aaKnown RBP19.08■□□□□ 0.64
CXCL12-207ENST00000488591 TMC4Q7Z404 712 aa19.08■□□□□ 0.64
CXCL12-207ENST00000488591 BRPF1P55201 1214 aaPredicted RBP19.07■□□□□ 0.64
CXCL12-207ENST00000488591 ATP6V0A2Q9Y487 856 aa19.07■□□□□ 0.64
CXCL12-207ENST00000488591 FER1L6Q2WGJ9 1857 aa19.07■□□□□ 0.64
CXCL12-207ENST00000488591 FKBP4Q02790 459 aaKnown RBP eCLIP19.06■□□□□ 0.64
CXCL12-207ENST00000488591 ZNF784Q8NCA9 323 aaPredicted RBP19.06■□□□□ 0.64
CXCL12-207ENST00000488591 C9orf78Q9NZ63 289 aaPredicted RBP19.06■□□□□ 0.64
CXCL12-207ENST00000488591 NOB1Q9ULX3 412 aaKnown RBP19.06■□□□□ 0.64
CXCL12-207ENST00000488591 SBF1O95248 1867 aa19.05■□□□□ 0.64
CXCL12-207ENST00000488591 KIF16BQ96L93 1317 aa19.05■□□□□ 0.64
CXCL12-207ENST00000488591 CTSWP56202 376 aa19.05■□□□□ 0.64
CXCL12-207ENST00000488591 OLFM4Q6UX06 510 aa19.05■□□□□ 0.64
CXCL12-207ENST00000488591 SP8Q8IXZ3 490 aa19.05■□□□□ 0.64
CXCL12-207ENST00000488591 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
CXCL12-207ENST00000488591 GRM8O00222 908 aa19.04■□□□□ 0.64
CXCL12-207ENST00000488591 PSMD1Q99460 953 aa19.04■□□□□ 0.64
CXCL12-207ENST00000488591 IPO8O15397 1037 aaKnown RBP19.03■□□□□ 0.64
CXCL12-207ENST00000488591 RPS8P62241 208 aaKnown RBP19.03■□□□□ 0.64
CXCL12-207ENST00000488591 TTLL11Q8NHH1 800 aa19.03■□□□□ 0.64
CXCL12-207ENST00000488591 CELF1Q92879 486 aaKnown RBP19.03■□□□□ 0.64
CXCL12-207ENST00000488591 CCDC85AQ96PX6 553 aaPredicted RBP19.03■□□□□ 0.64
CXCL12-207ENST00000488591 PLA2G12BQ9BX93 195 aa19.03■□□□□ 0.64
CXCL12-207ENST00000488591 CCDC88AQ3V6T2 1871 aa19.03■□□□□ 0.64
CXCL12-207ENST00000488591 ZC3H4Q9UPT8 1303 aaKnown RBP19.02■□□□□ 0.64
CXCL12-207ENST00000488591 CASP7P55210 303 aa19.02■□□□□ 0.64
CXCL12-207ENST00000488591 ARHGAP45Q92619 1136 aa19.02■□□□□ 0.64
CXCL12-207ENST00000488591 CDC5LQ99459 802 aaKnown RBP19.02■□□□□ 0.64
CXCL12-207ENST00000488591 SEC31BQ9NQW1 1179 aa19.02■□□□□ 0.64
CXCL12-207ENST00000488591 MYH3P11055 1940 aa19.02■□□□□ 0.63
CXCL12-207ENST00000488591 TAF1P21675 1872 aa19.01■□□□□ 0.63
CXCL12-207ENST00000488591 CCT4P50991 539 aaKnown RBP19.01■□□□□ 0.63
CXCL12-207ENST00000488591 DPP8Q6V1X1 898 aaPredicted RBP19.01■□□□□ 0.63
CXCL12-207ENST00000488591 ANKRD18AQ8IVF6 992 aa19.01■□□□□ 0.63
CXCL12-207ENST00000488591 MPNDQ8N594 471 aa19.01■□□□□ 0.63
CXCL12-207ENST00000488591 SUPT20HQ8NEM7 779 aa19.01■□□□□ 0.63
CXCL12-207ENST00000488591 PRELPP51888 382 aa19■□□□□ 0.63
CXCL12-207ENST00000488591 ZNF526Q8TF50 670 aaPredicted RBP19■□□□□ 0.63
CXCL12-207ENST00000488591 GPBP1L1Q9HC44 474 aaPredicted RBP19■□□□□ 0.63
CXCL12-207ENST00000488591 ZNF277Q9NRM2 450 aaPredicted RBP19■□□□□ 0.63
CXCL12-207ENST00000488591 RTL9Q8NET4 1388 aa18.99■□□□□ 0.63
CXCL12-207ENST00000488591 BCAR3O75815 825 aa18.99■□□□□ 0.63
CXCL12-207ENST00000488591 CSF1RP07333 972 aa18.99■□□□□ 0.63
CXCL12-207ENST00000488591 IARSP41252 1262 aaKnown RBP18.99■□□□□ 0.63
CXCL12-207ENST00000488591 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
CXCL12-207ENST00000488591 GREM2Q9H772 168 aa18.99■□□□□ 0.63
CXCL12-207ENST00000488591 KDM2BQ8NHM5 1336 aa18.99■□□□□ 0.63
CXCL12-207ENST00000488591 DPY19L2Q6NUT2 758 aa18.98■□□□□ 0.63
CXCL12-207ENST00000488591 JDP2Q8WYK2 163 aa18.98■□□□□ 0.63
CXCL12-207ENST00000488591 VPS33BQ9H267 617 aa18.98■□□□□ 0.63
CXCL12-207ENST00000488591 SNED1Q8TER0 1413 aa18.98■□□□□ 0.63
CXCL12-207ENST00000488591 DICER1Q9UPY3 1922 aaKnown RBP18.98■□□□□ 0.63
CXCL12-207ENST00000488591 IGHMBP2P38935 993 aaKnown RBP18.97■□□□□ 0.63
CXCL12-207ENST00000488591 NSFL1CQ9UNZ2 370 aaKnown RBP18.97■□□□□ 0.63
CXCL12-207ENST00000488591 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
CXCL12-207ENST00000488591 UTYO14607 1347 aa18.97■□□□□ 0.63
CXCL12-207ENST00000488591 ANKRD18BA2A2Z9 1011 aa18.96■□□□□ 0.63
CXCL12-207ENST00000488591 NBPF7P0C2Y1 421 aaPredicted RBP18.96■□□□□ 0.63
CXCL12-207ENST00000488591 ITGA6P23229 1130 aa18.96■□□□□ 0.63
CXCL12-207ENST00000488591 FOXO4P98177 505 aa18.96■□□□□ 0.63
CXCL12-207ENST00000488591 RTFDC1Q9BY42 306 aaPredicted RBP18.96■□□□□ 0.63
CXCL12-207ENST00000488591 TIAM2Q8IVF5 1701 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 IFIT5Q13325 482 aaKnown RBP18.95■□□□□ 0.62
CXCL12-207ENST00000488591 FAM161AQ3B820 660 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 ZKSCAN2Q63HK3 967 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 LMBR1LQ6UX01 489 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 ATF7IPQ6VMQ6 1270 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 SLC51AQ86UW1 340 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 LARGE2Q8N3Y3 721 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 MPHOSPH8Q99549 860 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 USP44Q9H0E7 712 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 BSDC1Q9NW68 430 aaPredicted RBP18.95■□□□□ 0.62
CXCL12-207ENST00000488591 ANKIB1Q9P2G1 1089 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 HDAC5Q9UQL6 1122 aa18.95■□□□□ 0.62
CXCL12-207ENST00000488591 LRRC37AA6NMS7 1700 aa18.94■□□□□ 0.62
CXCL12-207ENST00000488591 GLTPD2A6NH11 291 aa18.94■□□□□ 0.62
CXCL12-207ENST00000488591 PPIP5K2O43314 1243 aa18.94■□□□□ 0.62
CXCL12-207ENST00000488591 GPSM2P81274 684 aa18.94■□□□□ 0.62
CXCL12-207ENST00000488591 CCDC57Q2TAC2 916 aa18.94■□□□□ 0.62
CXCL12-207ENST00000488591 C6orf229H3BNL8 230 aa18.93■□□□□ 0.62
CXCL12-207ENST00000488591 EPHA10Q5JZY3 1008 aa18.93■□□□□ 0.62
CXCL12-207ENST00000488591 INTS3Q68E01 1043 aaKnown RBP18.93■□□□□ 0.62
CXCL12-207ENST00000488591 NIM1KQ8IY84 436 aa18.93■□□□□ 0.62
CXCL12-207ENST00000488591 SUCLG2Q96I99 432 aa18.93■□□□□ 0.62
CXCL12-207ENST00000488591 EYA3Q99504 573 aa18.93■□□□□ 0.62
CXCL12-207ENST00000488591 TRIM27P14373 513 aa18.92■□□□□ 0.62
CXCL12-207ENST00000488591 AOC3Q16853 763 aa18.92■□□□□ 0.62
CXCL12-207ENST00000488591 WASHC4Q2M389 1173 aa18.92■□□□□ 0.62
CXCL12-207ENST00000488591 TAF7LQ5H9L4 462 aa18.92■□□□□ 0.62
CXCL12-207ENST00000488591 PODXL2Q9NZ53 605 aa18.92■□□□□ 0.62
CXCL12-207ENST00000488591 COL4A1P02462 1669 aa18.92■□□□□ 0.62
CXCL12-207ENST00000488591 UBTFL1P0CB47 393 aaPredicted RBP18.91■□□□□ 0.62
CXCL12-207ENST00000488591 EIF6P56537 245 aaKnown RBP18.91■□□□□ 0.62
CXCL12-207ENST00000488591 KIAA2012Q0VF49 1180 aa18.91■□□□□ 0.62
CXCL12-207ENST00000488591 GGA1Q9UJY5 639 aa18.91■□□□□ 0.62
CXCL12-207ENST00000488591 XDHP47989 1333 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms